RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 SULF1Q8IWU6 871 aa18.41■□□□□ 0.54
IGHV3-53-201ENST00000390627 TEKT1Q969V4 418 aa18.41■□□□□ 0.54
IGHV3-53-201ENST00000390627 ZBED3Q96IU2 234 aaPredicted RBP18.41■□□□□ 0.54
IGHV3-53-201ENST00000390627 SPDYE2BA6NHP3 402 aa18.4■□□□□ 0.54
IGHV3-53-201ENST00000390627 SPDYE6P0CI01 402 aa18.4■□□□□ 0.54
IGHV3-53-201ENST00000390627 PRDX5P30044 214 aa18.4■□□□□ 0.54
IGHV3-53-201ENST00000390627 APLP1P51693 650 aa18.4■□□□□ 0.54
IGHV3-53-201ENST00000390627 KRT26Q7Z3Y9 468 aa18.4■□□□□ 0.54
IGHV3-53-201ENST00000390627 MRIQ9BWK5 157 aa18.4■□□□□ 0.54
IGHV3-53-201ENST00000390627 GLIS2Q9BZE0 524 aaPredicted RBP18.4■□□□□ 0.54
IGHV3-53-201ENST00000390627 BCL11AQ9H165 835 aa18.4■□□□□ 0.54
IGHV3-53-201ENST00000390627 ABCF2Q9UG63 623 aa18.4■□□□□ 0.54
IGHV3-53-201ENST00000390627 ASTN2O75129 1339 aaPredicted RBP18.4■□□□□ 0.54
IGHV3-53-201ENST00000390627 IRX6P78412 446 aaPredicted RBP18.39■□□□□ 0.53
IGHV3-53-201ENST00000390627 PI16Q6UXB8 463 aa18.39■□□□□ 0.53
IGHV3-53-201ENST00000390627 APOBEC3FQ8IUX4 373 aaKnown RBP18.39■□□□□ 0.53
IGHV3-53-201ENST00000390627 GCC1Q96CN9 775 aa18.39■□□□□ 0.53
IGHV3-53-201ENST00000390627 HHIPL2Q6UWX4 724 aa18.38■□□□□ 0.53
IGHV3-53-201ENST00000390627 ERICH6Q7L0X2 663 aa18.38■□□□□ 0.53
IGHV3-53-201ENST00000390627 USP48Q86UV5 1035 aa18.38■□□□□ 0.53
IGHV3-53-201ENST00000390627 DZIP1Q86YF9 867 aaKnown RBP18.38■□□□□ 0.53
IGHV3-53-201ENST00000390627 PRMT6Q96LA8 375 aaPredicted RBP18.38■□□□□ 0.53
IGHV3-53-201ENST00000390627 ZDHHC15Q96MV8 337 aa18.38■□□□□ 0.53
IGHV3-53-201ENST00000390627 RWDD1Q9H446 243 aaPredicted RBP18.38■□□□□ 0.53
IGHV3-53-201ENST00000390627 ZBTB47Q9UFB7 747 aaPredicted RBP18.38■□□□□ 0.53
IGHV3-53-201ENST00000390627 ECM29Q5VYK3 1845 aa18.37■□□□□ 0.53
IGHV3-53-201ENST00000390627 TRAF5O00463 557 aa18.37■□□□□ 0.53
IGHV3-53-201ENST00000390627 SMARCA5O60264 1052 aaPredicted RBP18.37■□□□□ 0.53
IGHV3-53-201ENST00000390627 SLF2Q8IX21 1173 aa18.37■□□□□ 0.53
IGHV3-53-201ENST00000390627 SNRKQ9NRH2 765 aa18.37■□□□□ 0.53
IGHV3-53-201ENST00000390627 PCDHAC2Q9Y5I4 1007 aa18.37■□□□□ 0.53
IGHV3-53-201ENST00000390627 ADM5C9JUS6 153 aa18.36■□□□□ 0.53
IGHV3-53-201ENST00000390627 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.36■□□□□ 0.53
IGHV3-53-201ENST00000390627 AKAP11Q9UKA4 1901 aa18.36■□□□□ 0.53
IGHV3-53-201ENST00000390627 CLRN2A0PK11 232 aa18.35■□□□□ 0.53
IGHV3-53-201ENST00000390627 TMEM88BA6NKF7 163 aa18.35■□□□□ 0.53
IGHV3-53-201ENST00000390627 IGSF3O75054 1194 aa18.35■□□□□ 0.53
IGHV3-53-201ENST00000390627 ZAP70P43403 619 aa18.35■□□□□ 0.53
IGHV3-53-201ENST00000390627 SPDYE2Q495Y8 402 aa18.35■□□□□ 0.53
IGHV3-53-201ENST00000390627 GPATCH3Q96I76 525 aa18.35■□□□□ 0.53
IGHV3-53-201ENST00000390627 CREBZFQ9NS37 354 aa18.35■□□□□ 0.53
IGHV3-53-201ENST00000390627 LRP2BPQ9P2M1 347 aa18.35■□□□□ 0.53
IGHV3-53-201ENST00000390627 POLR2AP24928 1970 aaKnown RBP18.35■□□□□ 0.53
IGHV3-53-201ENST00000390627 TRPM7Q96QT4 1865 aa18.35■□□□□ 0.53
IGHV3-53-201ENST00000390627 CYP2E1P05181 493 aaPredicted RBP18.34■□□□□ 0.53
IGHV3-53-201ENST00000390627 CENPBP07199 599 aaPredicted RBP18.34■□□□□ 0.53
IGHV3-53-201ENST00000390627 GSTO1P78417 241 aa18.34■□□□□ 0.53
IGHV3-53-201ENST00000390627 TNFAIP1Q13829 316 aa18.34■□□□□ 0.53
IGHV3-53-201ENST00000390627 DIXDC1Q155Q3 683 aa18.34■□□□□ 0.53
IGHV3-53-201ENST00000390627 TBC1D9Q6ZT07 1266 aa18.34■□□□□ 0.53
IGHV3-53-201ENST00000390627 TDRD3Q9H7E2 651 aaKnown RBP18.34■□□□□ 0.53
IGHV3-53-201ENST00000390627 VEZTQ9HBM0 779 aa18.34■□□□□ 0.53
IGHV3-53-201ENST00000390627 TMOD2Q9NZR1 351 aa18.34■□□□□ 0.53
IGHV3-53-201ENST00000390627 RAI14Q9P0K7 980 aa18.34■□□□□ 0.53
IGHV3-53-201ENST00000390627 DAGLAQ9Y4D2 1042 aa18.34■□□□□ 0.53
IGHV3-53-201ENST00000390627 PPP2R3BQ9Y5P8 575 aa18.34■□□□□ 0.53
IGHV3-53-201ENST00000390627 CELF2O95319 508 aaKnown RBP18.33■□□□□ 0.52
IGHV3-53-201ENST00000390627 MECOMQ03112 1051 aa18.33■□□□□ 0.52
IGHV3-53-201ENST00000390627 FMR1Q06787 632 aaKnown RBP eCLIP18.33■□□□□ 0.52
IGHV3-53-201ENST00000390627 APOBEC3HQ6NTF7 200 aaKnown RBP18.33■□□□□ 0.52
IGHV3-53-201ENST00000390627 CDCA5Q96FF9 252 aa18.33■□□□□ 0.52
IGHV3-53-201ENST00000390627 ZNF408Q9H9D4 720 aa18.33■□□□□ 0.52
IGHV3-53-201ENST00000390627 ZNF70Q9UC06 446 aaPredicted RBP18.33■□□□□ 0.52
IGHV3-53-201ENST00000390627 GAKO14976 1311 aa18.32■□□□□ 0.52
IGHV3-53-201ENST00000390627 AOX1Q06278 1338 aa18.32■□□□□ 0.52
IGHV3-53-201ENST00000390627 LDHCP07864 332 aa18.32■□□□□ 0.52
IGHV3-53-201ENST00000390627 ATP5JP18859 108 aa18.32■□□□□ 0.52
IGHV3-53-201ENST00000390627 TTF1Q15361 905 aaPredicted RBP18.32■□□□□ 0.52
IGHV3-53-201ENST00000390627 ANKRD45Q5TZF3 282 aa18.32■□□□□ 0.52
IGHV3-53-201ENST00000390627 NSUN4Q96CB9 384 aaKnown RBP18.32■□□□□ 0.52
IGHV3-53-201ENST00000390627 FAM163AQ96GL9 167 aaPredicted RBP18.32■□□□□ 0.52
IGHV3-53-201ENST00000390627 ECHDC1Q9NTX5 307 aa18.32■□□□□ 0.52
IGHV3-53-201ENST00000390627 MAST2Q6P0Q8 1798 aa18.32■□□□□ 0.52
IGHV3-53-201ENST00000390627 MROH7-TTC4A0A0A0MT08 1334 aa18.31■□□□□ 0.52
IGHV3-53-201ENST00000390627 TNNI2P48788 182 aa18.31■□□□□ 0.52
IGHV3-53-201ENST00000390627 SMC5Q8IY18 1101 aa18.31■□□□□ 0.52
IGHV3-53-201ENST00000390627 DNAJC2Q99543 621 aaKnown RBP18.31■□□□□ 0.52
IGHV3-53-201ENST00000390627 DEFB129Q9H1M3 183 aa18.31■□□□□ 0.52
IGHV3-53-201ENST00000390627 PIH1D3Q9NQM4 214 aaKnown RBP18.31■□□□□ 0.52
IGHV3-53-201ENST00000390627 SCAF8Q9UPN6 1271 aaKnown RBP18.31■□□□□ 0.52
IGHV3-53-201ENST00000390627 MYH2Q9UKX2 1941 aa18.31■□□□□ 0.52
IGHV3-53-201ENST00000390627 IGHDP01880 384 aa18.3■□□□□ 0.52
IGHV3-53-201ENST00000390627 NF2P35240 595 aa18.3■□□□□ 0.52
IGHV3-53-201ENST00000390627 CST9Q5W186 159 aa18.3■□□□□ 0.52
IGHV3-53-201ENST00000390627 NAA16Q6N069 864 aaPredicted RBP18.3■□□□□ 0.52
IGHV3-53-201ENST00000390627 BOLA2Q9H3K6 86 aa18.3■□□□□ 0.52
IGHV3-53-201ENST00000390627 ABT1Q9ULW3 272 aaKnown RBP18.3■□□□□ 0.52
IGHV3-53-201ENST00000390627 IDH1O75874 414 aaKnown RBP18.29■□□□□ 0.52
IGHV3-53-201ENST00000390627 HTRA3P83110 453 aa18.29■□□□□ 0.52
IGHV3-53-201ENST00000390627 MAP3K12Q12852 859 aa18.29■□□□□ 0.52
IGHV3-53-201ENST00000390627 FKBP1CQ5VVH2 108 aa18.29■□□□□ 0.52
IGHV3-53-201ENST00000390627 TMED8Q6PL24 325 aaPredicted RBP18.29■□□□□ 0.52
IGHV3-53-201ENST00000390627 DLK2Q6UY11 383 aa18.29■□□□□ 0.52
IGHV3-53-201ENST00000390627 ZNF384Q8TF68 577 aa18.29■□□□□ 0.52
IGHV3-53-201ENST00000390627 HAUS7Q99871 368 aa18.29■□□□□ 0.52
IGHV3-53-201ENST00000390627 ANTXR1Q9H6X2 564 aa18.29■□□□□ 0.52
IGHV3-53-201ENST00000390627 NDUFB9Q9Y6M9 179 aa18.29■□□□□ 0.52
IGHV3-53-201ENST00000390627 TTC41PQ6P2S7 1318 aa18.28■□□□□ 0.52
IGHV3-53-201ENST00000390627 TCP10L2B9ZVM9 353 aa18.28■□□□□ 0.52
IGHV3-53-201ENST00000390627 GOLIM4O00461 696 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms