RNA–Protein interactions for RNA: ENST00000390448.3

TRAV20-201, Transcript of T cell receptor alpha variable 20, humanhuman

APPRIS P1 BASIC

Gene TRAV20, Length 406 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20-201ENST00000390448 TBC1D22AQ8WUA7 517 aa11.31□□□□□ -0.6
TRAV20-201ENST00000390448 BICC1Q9H694 974 aaKnown RBP11.31□□□□□ -0.6
TRAV20-201ENST00000390448 EFCC1Q9HA90 598 aa11.31□□□□□ -0.6
TRAV20-201ENST00000390448 GTF2A2P52657 109 aa11.3□□□□□ -0.6
TRAV20-201ENST00000390448 MAP3K9P80192 1104 aa11.3□□□□□ -0.6
TRAV20-201ENST00000390448 SP3Q02447 781 aa11.3□□□□□ -0.6
TRAV20-201ENST00000390448 CD99L2Q8TCZ2 262 aa11.3□□□□□ -0.6
TRAV20-201ENST00000390448 TEKT1Q969V4 418 aa11.3□□□□□ -0.6
TRAV20-201ENST00000390448 TMEM39BQ9GZU3 492 aa11.3□□□□□ -0.6
TRAV20-201ENST00000390448 RIPOR2Q9Y4F9 1068 aa11.3□□□□□ -0.6
TRAV20-201ENST00000390448 AOX1Q06278 1338 aa11.3□□□□□ -0.6
TRAV20-201ENST00000390448 CCL15-CCL14A0A0B4J2E2 113 aa11.29□□□□□ -0.6
TRAV20-201ENST00000390448 PDE8BO95263 885 aa11.29□□□□□ -0.6
TRAV20-201ENST00000390448 IFIT1P09914 478 aaKnown RBP11.29□□□□□ -0.6
TRAV20-201ENST00000390448 CCL15Q16663 113 aa11.29□□□□□ -0.6
TRAV20-201ENST00000390448 LRRC24Q50LG9 513 aa11.29□□□□□ -0.6
TRAV20-201ENST00000390448 FBXO33Q7Z6M2 555 aa11.29□□□□□ -0.6
TRAV20-201ENST00000390448 HOOK2Q96ED9 719 aa11.29□□□□□ -0.6
TRAV20-201ENST00000390448 OTUD5Q96G74 571 aa11.29□□□□□ -0.6
TRAV20-201ENST00000390448 ZFYVE28Q9HCC9 887 aa11.29□□□□□ -0.6
TRAV20-201ENST00000390448 PTPN22Q9Y2R2 807 aa11.29□□□□□ -0.6
TRAV20-201ENST00000390448 SSC5DA1L4H1 1573 aa11.28□□□□□ -0.6
TRAV20-201ENST00000390448 ZNF646O15015 1829 aaPredicted RBP11.28□□□□□ -0.6
TRAV20-201ENST00000390448 GJA5P36382 358 aa11.28□□□□□ -0.6
TRAV20-201ENST00000390448 BCAMP50895 628 aa11.28□□□□□ -0.6
TRAV20-201ENST00000390448 HDLBPQ00341 1268 aaKnown RBP11.28□□□□□ -0.6
TRAV20-201ENST00000390448 VGLL4Q14135 290 aa11.28□□□□□ -0.6
TRAV20-201ENST00000390448 TAF1CQ15572 869 aaPredicted RBP11.28□□□□□ -0.6
TRAV20-201ENST00000390448 KAZALD1Q96I82 304 aa11.28□□□□□ -0.6
TRAV20-201ENST00000390448 TMEM106CQ9BVX2 250 aa11.28□□□□□ -0.6
TRAV20-201ENST00000390448 MAST3O60307 1309 aa11.28□□□□□ -0.6
TRAV20-201ENST00000390448 PTPRCP08575 1304 aa11.28□□□□□ -0.6
TRAV20-201ENST00000390448 CENPFP49454 3210 aa11.27□□□□□ -0.61
TRAV20-201ENST00000390448 TESPA1A2RU30 521 aaPredicted RBP11.27□□□□□ -0.61
TRAV20-201ENST00000390448 CACNB3P54284 484 aa11.27□□□□□ -0.61
TRAV20-201ENST00000390448 KIF22Q14807 665 aa11.27□□□□□ -0.61
TRAV20-201ENST00000390448 PUM3Q15397 648 aaKnown RBP11.27□□□□□ -0.61
TRAV20-201ENST00000390448 RABL6Q3YEC7 729 aaPredicted RBP11.27□□□□□ -0.61
TRAV20-201ENST00000390448 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.27□□□□□ -0.61
TRAV20-201ENST00000390448 NBPF11Q86T75 865 aa11.27□□□□□ -0.61
TRAV20-201ENST00000390448 MRPL50Q8N5N7 158 aaKnown RBP11.27□□□□□ -0.61
TRAV20-201ENST00000390448 KLHDC4Q8TBB5 520 aa11.27□□□□□ -0.61
TRAV20-201ENST00000390448 CNKSR2Q8WXI2 1034 aa11.27□□□□□ -0.61
TRAV20-201ENST00000390448 TEPSINQ96N21 525 aa11.27□□□□□ -0.61
TRAV20-201ENST00000390448 PTPN18Q99952 460 aa11.27□□□□□ -0.61
TRAV20-201ENST00000390448 PCDH10Q9P2E7 1040 aa11.27□□□□□ -0.61
TRAV20-201ENST00000390448 UTYO14607 1347 aa11.27□□□□□ -0.61
TRAV20-201ENST00000390448 E9PSI1 815 aa11.26□□□□□ -0.61
TRAV20-201ENST00000390448 CETPP11597 493 aa11.26□□□□□ -0.61
TRAV20-201ENST00000390448 SLC5A1P13866 664 aa11.26□□□□□ -0.61
TRAV20-201ENST00000390448 GRIK5Q16478 980 aa11.26□□□□□ -0.61
TRAV20-201ENST00000390448 DCAF15Q66K64 600 aa11.26□□□□□ -0.61
TRAV20-201ENST00000390448 CDAN1Q8IWY9 1227 aa11.26□□□□□ -0.61
TRAV20-201ENST00000390448 ANKRD44Q8N8A2 993 aa11.26□□□□□ -0.61
TRAV20-201ENST00000390448 BRI3BPQ8WY22 251 aa11.26□□□□□ -0.61
TRAV20-201ENST00000390448 GCC1Q96CN9 775 aa11.26□□□□□ -0.61
TRAV20-201ENST00000390448 MS4A4AQ96JQ5 239 aa11.26□□□□□ -0.61
TRAV20-201ENST00000390448 WRNIP1Q96S55 665 aa11.26□□□□□ -0.61
TRAV20-201ENST00000390448 SUGT1Q9Y2Z0 365 aa11.26□□□□□ -0.61
TRAV20-201ENST00000390448 SNAPC2Q13487 334 aa11.25□□□□□ -0.61
TRAV20-201ENST00000390448 SLC4A8Q2Y0W8 1093 aa11.25□□□□□ -0.61
TRAV20-201ENST00000390448 SLC9C1Q4G0N8 1177 aa11.25□□□□□ -0.61
TRAV20-201ENST00000390448 FAM83AQ86UY5 434 aa11.25□□□□□ -0.61
TRAV20-201ENST00000390448 ERO1BQ86YB8 467 aa11.25□□□□□ -0.61
TRAV20-201ENST00000390448 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.25□□□□□ -0.61
TRAV20-201ENST00000390448 WDR66Q8TBY9 1149 aa11.25□□□□□ -0.61
TRAV20-201ENST00000390448 ZKSCAN4Q969J2 545 aaPredicted RBP11.25□□□□□ -0.61
TRAV20-201ENST00000390448 ZDHHC15Q96MV8 337 aa11.25□□□□□ -0.61
TRAV20-201ENST00000390448 MRIQ9BWK5 157 aa11.25□□□□□ -0.61
TRAV20-201ENST00000390448 USP44Q9H0E7 712 aa11.25□□□□□ -0.61
TRAV20-201ENST00000390448 GNL3LQ9NVN8 582 aaKnown RBP11.25□□□□□ -0.61
TRAV20-201ENST00000390448 HTTP42858 3142 aa11.25□□□□□ -0.61
TRAV20-201ENST00000390448 ECM29Q5VYK3 1845 aa11.24□□□□□ -0.61
TRAV20-201ENST00000390448 POTEFA5A3E0 1075 aa11.24□□□□□ -0.61
TRAV20-201ENST00000390448 EYA2O00167 538 aa11.24□□□□□ -0.61
TRAV20-201ENST00000390448 MYCP01106 439 aaPredicted RBP11.24□□□□□ -0.61
TRAV20-201ENST00000390448 FKBP1CQ5VVH2 108 aa11.24□□□□□ -0.61
TRAV20-201ENST00000390448 HHIPL2Q6UWX4 724 aa11.24□□□□□ -0.61
TRAV20-201ENST00000390448 MIGA2Q7L4E1 593 aa11.24□□□□□ -0.61
TRAV20-201ENST00000390448 FAM43AQ8N2R8 423 aa11.24□□□□□ -0.61
TRAV20-201ENST00000390448 SSH1Q8WYL5 1049 aa11.24□□□□□ -0.61
TRAV20-201ENST00000390448 LPIN2Q92539 896 aa11.24□□□□□ -0.61
TRAV20-201ENST00000390448 ZNF341Q9BYN7 854 aa11.24□□□□□ -0.61
TRAV20-201ENST00000390448 SMC4Q9NTJ3 1288 aa11.24□□□□□ -0.61
TRAV20-201ENST00000390448 HDAC5Q9UQL6 1122 aa11.24□□□□□ -0.61
TRAV20-201ENST00000390448 MKI67P46013 3256 aaKnown RBP11.23□□□□□ -0.61
TRAV20-201ENST00000390448 SPDYE5A6NIY4 337 aa11.23□□□□□ -0.61
TRAV20-201ENST00000390448 ECM2O94769 699 aaPredicted RBP11.23□□□□□ -0.61
TRAV20-201ENST00000390448 UBTFL1P0CB47 393 aaPredicted RBP11.23□□□□□ -0.61
TRAV20-201ENST00000390448 TCP10Q12799 353 aa11.23□□□□□ -0.61
TRAV20-201ENST00000390448 APOBEC3HQ6NTF7 200 aaKnown RBP11.23□□□□□ -0.61
TRAV20-201ENST00000390448 VGLL2Q8N8G2 317 aa11.23□□□□□ -0.61
TRAV20-201ENST00000390448 ARMC5Q96C12 935 aa11.23□□□□□ -0.61
TRAV20-201ENST00000390448 SIL1Q9H173 461 aa11.23□□□□□ -0.61
TRAV20-201ENST00000390448 CEP126Q9P2H0 1117 aa11.23□□□□□ -0.61
TRAV20-201ENST00000390448 A0A1B0GUL6 1792 aa11.23□□□□□ -0.61
TRAV20-201ENST00000390448 IRF6O14896 467 aa11.22□□□□□ -0.61
TRAV20-201ENST00000390448 LDHBP07195 334 aaKnown RBP11.22□□□□□ -0.61
TRAV20-201ENST00000390448 EN2P19622 333 aaPredicted RBP11.22□□□□□ -0.61
TRAV20-201ENST00000390448 KIF16BQ96L93 1317 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms