RNA–Protein interactions for RNA: ENST00000390439.2

TRAV13-2-201, Transcript of T cell receptor alpha variable 13-2, humanhuman

APPRIS P1 BASIC

Gene TRAV13-2, Length 410 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2-201ENST00000390439 VAMP4O75379 141 aa12.28□□□□□ -0.44
TRAV13-2-201ENST00000390439 FRAT2O75474 233 aaPredicted RBP12.28□□□□□ -0.44
TRAV13-2-201ENST00000390439 GNRH1P01148 92 aa12.28□□□□□ -0.44
TRAV13-2-201ENST00000390439 CETPP11597 493 aa12.28□□□□□ -0.44
TRAV13-2-201ENST00000390439 CRKP46108 304 aa12.28□□□□□ -0.44
TRAV13-2-201ENST00000390439 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.28□□□□□ -0.44
TRAV13-2-201ENST00000390439 TBC1D22AQ8WUA7 517 aa12.28□□□□□ -0.44
TRAV13-2-201ENST00000390439 BRI3BPQ8WY22 251 aa12.28□□□□□ -0.44
TRAV13-2-201ENST00000390439 ZNF594Q96JF6 807 aaPredicted RBP12.28□□□□□ -0.44
TRAV13-2-201ENST00000390439 TMOD2Q9NZR1 351 aa12.28□□□□□ -0.44
TRAV13-2-201ENST00000390439 F6X3S4 739 aa12.27□□□□□ -0.45
TRAV13-2-201ENST00000390439 GYG1P46976 350 aa12.27□□□□□ -0.45
TRAV13-2-201ENST00000390439 PRMT2P55345 433 aa12.27□□□□□ -0.45
TRAV13-2-201ENST00000390439 HDLBPQ00341 1268 aaKnown RBP12.27□□□□□ -0.45
TRAV13-2-201ENST00000390439 VGLL4Q14135 290 aa12.27□□□□□ -0.45
TRAV13-2-201ENST00000390439 CAVIN4Q5BKX8 364 aa12.27□□□□□ -0.45
TRAV13-2-201ENST00000390439 WDR63Q8IWG1 891 aa12.27□□□□□ -0.45
TRAV13-2-201ENST00000390439 OTUD5Q96G74 571 aa12.27□□□□□ -0.45
TRAV13-2-201ENST00000390439 FAM84BQ96KN1 310 aaPredicted RBP12.27□□□□□ -0.45
TRAV13-2-201ENST00000390439 TEPSINQ96N21 525 aa12.27□□□□□ -0.45
TRAV13-2-201ENST00000390439 TMEM39BQ9GZU3 492 aa12.27□□□□□ -0.45
TRAV13-2-201ENST00000390439 ZCCHC17Q9NP64 241 aaKnown RBP12.27□□□□□ -0.45
TRAV13-2-201ENST00000390439 PTCH2Q9Y6C5 1203 aa12.27□□□□□ -0.45
TRAV13-2-201ENST00000390439 FANCIQ9NVI1 1328 aa12.27□□□□□ -0.45
TRAV13-2-201ENST00000390439 ZNF646O15015 1829 aaPredicted RBP12.27□□□□□ -0.45
TRAV13-2-201ENST00000390439 TLR2O60603 784 aa12.26□□□□□ -0.45
TRAV13-2-201ENST00000390439 ALDH1L1O75891 902 aa12.26□□□□□ -0.45
TRAV13-2-201ENST00000390439 SNAPC2Q13487 334 aa12.26□□□□□ -0.45
TRAV13-2-201ENST00000390439 ERO1BQ86YB8 467 aa12.26□□□□□ -0.45
TRAV13-2-201ENST00000390439 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.26□□□□□ -0.45
TRAV13-2-201ENST00000390439 TEKT1Q969V4 418 aa12.26□□□□□ -0.45
TRAV13-2-201ENST00000390439 AOX1Q06278 1338 aa12.26□□□□□ -0.45
TRAV13-2-201ENST00000390439 MROH5Q6ZUA9 1318 aa12.26□□□□□ -0.45
TRAV13-2-201ENST00000390439 SPDYE5A6NIY4 337 aa12.25□□□□□ -0.45
TRAV13-2-201ENST00000390439 HOXD10P28358 340 aa12.25□□□□□ -0.45
TRAV13-2-201ENST00000390439 EXOSC9Q06265 439 aaKnown RBP12.25□□□□□ -0.45
TRAV13-2-201ENST00000390439 CHAF1AQ13111 956 aaPredicted RBP12.25□□□□□ -0.45
TRAV13-2-201ENST00000390439 EPHA10Q5JZY3 1008 aa12.25□□□□□ -0.45
TRAV13-2-201ENST00000390439 DCAF15Q66K64 600 aa12.25□□□□□ -0.45
TRAV13-2-201ENST00000390439 SLC4A10Q6U841 1118 aa12.25□□□□□ -0.45
TRAV13-2-201ENST00000390439 FAM43AQ8N2R8 423 aa12.25□□□□□ -0.45
TRAV13-2-201ENST00000390439 CNKSR2Q8WXI2 1034 aa12.25□□□□□ -0.45
TRAV13-2-201ENST00000390439 MRIQ9BWK5 157 aa12.25□□□□□ -0.45
TRAV13-2-201ENST00000390439 SRCIN1Q9C0H9 1055 aa12.25□□□□□ -0.45
TRAV13-2-201ENST00000390439 CEP290O15078 2479 aa12.25□□□□□ -0.45
TRAV13-2-201ENST00000390439 MAST3O60307 1309 aa12.24□□□□□ -0.45
TRAV13-2-201ENST00000390439 MYCP01106 439 aaPredicted RBP12.24□□□□□ -0.45
TRAV13-2-201ENST00000390439 FXR1P51114 621 aaKnown RBP eCLIP12.24□□□□□ -0.45
TRAV13-2-201ENST00000390439 LACTBP83111 547 aaPredicted RBP12.24□□□□□ -0.45
TRAV13-2-201ENST00000390439 FKBP1CQ5VVH2 108 aa12.24□□□□□ -0.45
TRAV13-2-201ENST00000390439 FBXO33Q7Z6M2 555 aa12.24□□□□□ -0.45
TRAV13-2-201ENST00000390439 FAM83AQ86UY5 434 aa12.24□□□□□ -0.45
TRAV13-2-201ENST00000390439 WRNIP1Q96S55 665 aa12.24□□□□□ -0.45
TRAV13-2-201ENST00000390439 COLQQ9Y215 455 aaPredicted RBP12.24□□□□□ -0.45
TRAV13-2-201ENST00000390439 SUGT1Q9Y2Z0 365 aa12.24□□□□□ -0.45
TRAV13-2-201ENST00000390439 ECM29Q5VYK3 1845 aa12.23□□□□□ -0.45
TRAV13-2-201ENST00000390439 BTBD19C9JJ37 291 aa12.23□□□□□ -0.45
TRAV13-2-201ENST00000390439 CAP1Q01518 475 aa12.23□□□□□ -0.45
TRAV13-2-201ENST00000390439 PPIL2Q13356 520 aa12.23□□□□□ -0.45
TRAV13-2-201ENST00000390439 METTL24Q5JXM2 366 aa12.23□□□□□ -0.45
TRAV13-2-201ENST00000390439 CDAN1Q8IWY9 1227 aa12.23□□□□□ -0.45
TRAV13-2-201ENST00000390439 NKX2-3Q8TAU0 364 aa12.23□□□□□ -0.45
TRAV13-2-201ENST00000390439 ZDHHC15Q96MV8 337 aa12.23□□□□□ -0.45
TRAV13-2-201ENST00000390439 PUS3Q9BZE2 481 aaKnown RBP12.23□□□□□ -0.45
TRAV13-2-201ENST00000390439 SALL2Q9Y467 1007 aaPredicted RBP12.23□□□□□ -0.45
TRAV13-2-201ENST00000390439 RIPOR2Q9Y4F9 1068 aa12.23□□□□□ -0.45
TRAV13-2-201ENST00000390439 CACNA1FO60840 1977 aa12.23□□□□□ -0.45
TRAV13-2-201ENST00000390439 IRF6O14896 467 aa12.22□□□□□ -0.45
TRAV13-2-201ENST00000390439 PPATQ06203 517 aa12.22□□□□□ -0.45
TRAV13-2-201ENST00000390439 SH3TC2Q8TF17 1288 aa12.22□□□□□ -0.45
TRAV13-2-201ENST00000390439 DPF3Q92784 378 aa12.22□□□□□ -0.45
TRAV13-2-201ENST00000390439 ZKSCAN4Q969J2 545 aaPredicted RBP12.22□□□□□ -0.45
TRAV13-2-201ENST00000390439 ZNF341Q9BYN7 854 aa12.22□□□□□ -0.45
TRAV13-2-201ENST00000390439 IQSEC3Q9UPP2 1182 aaPredicted RBP12.22□□□□□ -0.45
TRAV13-2-201ENST00000390439 SNCAIPQ9Y6H5 919 aa12.22□□□□□ -0.45
TRAV13-2-201ENST00000390439 H0YGN5 161 aa12.21□□□□□ -0.45
TRAV13-2-201ENST00000390439 FMNL1O95466 1100 aaPredicted RBP12.21□□□□□ -0.45
TRAV13-2-201ENST00000390439 CACNB3P54284 484 aa12.21□□□□□ -0.45
TRAV13-2-201ENST00000390439 RAET1EQ8TD07 263 aa12.21□□□□□ -0.45
TRAV13-2-201ENST00000390439 ARHGAP39Q9C0H5 1083 aa12.21□□□□□ -0.45
TRAV13-2-201ENST00000390439 HTTP42858 3142 aa12.21□□□□□ -0.46
TRAV13-2-201ENST00000390439 TRIOBPQ9H2D6 2365 aa12.2□□□□□ -0.46
TRAV13-2-201ENST00000390439 PDE8BO95263 885 aa12.2□□□□□ -0.46
TRAV13-2-201ENST00000390439 IFIT1P09914 478 aaKnown RBP12.2□□□□□ -0.46
TRAV13-2-201ENST00000390439 ZEB1P37275 1124 aaPredicted RBP12.2□□□□□ -0.46
TRAV13-2-201ENST00000390439 PSMC4P43686 418 aa12.2□□□□□ -0.46
TRAV13-2-201ENST00000390439 HHIPL2Q6UWX4 724 aa12.2□□□□□ -0.46
TRAV13-2-201ENST00000390439 C17orf99Q6UX52 265 aa12.2□□□□□ -0.46
TRAV13-2-201ENST00000390439 ANKRD23Q86SG2 305 aa12.2□□□□□ -0.46
TRAV13-2-201ENST00000390439 SUCLG2Q96I99 432 aa12.2□□□□□ -0.46
TRAV13-2-201ENST00000390439 TRIM47Q96LD4 638 aa12.2□□□□□ -0.46
TRAV13-2-201ENST00000390439 HTATIP2Q9BUP3 242 aa12.2□□□□□ -0.46
TRAV13-2-201ENST00000390439 MRS2Q9HD23 443 aa12.2□□□□□ -0.46
TRAV13-2-201ENST00000390439 BIN2Q9UBW5 565 aaPredicted RBP12.2□□□□□ -0.46
TRAV13-2-201ENST00000390439 SRRDQ9UH36 339 aa12.2□□□□□ -0.46
TRAV13-2-201ENST00000390439 MKI67P46013 3256 aaKnown RBP12.2□□□□□ -0.46
TRAV13-2-201ENST00000390439 LAMB1P07942 1786 aa12.2□□□□□ -0.46
TRAV13-2-201ENST00000390439 RBBP6Q7Z6E9 1792 aaKnown RBP12.2□□□□□ -0.46
TRAV13-2-201ENST00000390439 GRK4P32298 578 aa12.19□□□□□ -0.46
TRAV13-2-201ENST00000390439 BCAMP50895 628 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms