RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 HOXD10P28358 340 aa12.33□□□□□ -0.44
IFT88-203ENST00000389373 GRK4P32298 578 aa12.33□□□□□ -0.44
IFT88-203ENST00000389373 PRMT2P55345 433 aa12.33□□□□□ -0.44
IFT88-203ENST00000389373 DZIP1LQ8IYY4 767 aaKnown RBP12.33□□□□□ -0.44
IFT88-203ENST00000389373 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.33□□□□□ -0.44
IFT88-203ENST00000389373 TEPSINQ96N21 525 aa12.33□□□□□ -0.44
IFT88-203ENST00000389373 PLA2G12BQ9BX93 195 aa12.33□□□□□ -0.44
IFT88-203ENST00000389373 CENPFP49454 3210 aa12.32□□□□□ -0.44
IFT88-203ENST00000389373 SPDYE5A6NIY4 337 aa12.32□□□□□ -0.44
IFT88-203ENST00000389373 GJA8P48165 433 aa12.32□□□□□ -0.44
IFT88-203ENST00000389373 CALD1Q05682 793 aaKnown RBP12.32□□□□□ -0.44
IFT88-203ENST00000389373 IFIT5Q13325 482 aaKnown RBP12.32□□□□□ -0.44
IFT88-203ENST00000389373 SNAPC2Q13487 334 aa12.32□□□□□ -0.44
IFT88-203ENST00000389373 GCKRQ14397 625 aa12.32□□□□□ -0.44
IFT88-203ENST00000389373 MFSD14BQ5SR56 506 aa12.32□□□□□ -0.44
IFT88-203ENST00000389373 C15orf52Q6ZUT6 534 aaKnown RBP12.32□□□□□ -0.44
IFT88-203ENST00000389373 G2E3Q7L622 706 aa12.32□□□□□ -0.44
IFT88-203ENST00000389373 ZKSCAN4Q969J2 545 aaPredicted RBP12.32□□□□□ -0.44
IFT88-203ENST00000389373 LRCH3Q96II8 777 aa12.32□□□□□ -0.44
IFT88-203ENST00000389373 TRIM47Q96LD4 638 aa12.32□□□□□ -0.44
IFT88-203ENST00000389373 WRNIP1Q96S55 665 aa12.32□□□□□ -0.44
IFT88-203ENST00000389373 SRRDQ9UH36 339 aa12.32□□□□□ -0.44
IFT88-203ENST00000389373 RIPOR2Q9Y4F9 1068 aa12.32□□□□□ -0.44
IFT88-203ENST00000389373 IRS2Q9Y4H2 1338 aa12.32□□□□□ -0.44
IFT88-203ENST00000389373 SOX1O00570 391 aaPredicted RBP12.31□□□□□ -0.44
IFT88-203ENST00000389373 APAF1O14727 1248 aa12.31□□□□□ -0.44
IFT88-203ENST00000389373 IRF6O14896 467 aa12.31□□□□□ -0.44
IFT88-203ENST00000389373 ZBTB7BO15156 539 aaPredicted RBP12.31□□□□□ -0.44
IFT88-203ENST00000389373 GJB1P08034 283 aa12.31□□□□□ -0.44
IFT88-203ENST00000389373 OSBPP22059 807 aa12.31□□□□□ -0.44
IFT88-203ENST00000389373 CTGFP29279 349 aa12.31□□□□□ -0.44
IFT88-203ENST00000389373 CRKP46108 304 aa12.31□□□□□ -0.44
IFT88-203ENST00000389373 CACNB3P54284 484 aa12.31□□□□□ -0.44
IFT88-203ENST00000389373 UBXN2AP68543 259 aa12.31□□□□□ -0.44
IFT88-203ENST00000389373 TAF7LQ5H9L4 462 aa12.31□□□□□ -0.44
IFT88-203ENST00000389373 ERO1BQ86YB8 467 aa12.31□□□□□ -0.44
IFT88-203ENST00000389373 MYH16Q9H6N6 1097 aa12.31□□□□□ -0.44
IFT88-203ENST00000389373 STAP2Q9UGK3 403 aa12.31□□□□□ -0.44
IFT88-203ENST00000389373 SERPINA10Q9UK55 444 aa12.31□□□□□ -0.44
IFT88-203ENST00000389373 SNCAIPQ9Y6H5 919 aa12.31□□□□□ -0.44
IFT88-203ENST00000389373 ZSWIM8A7E2V4 1837 aa12.31□□□□□ -0.44
IFT88-203ENST00000389373 MYBBP1AQ9BQG0 1328 aaKnown RBP12.31□□□□□ -0.44
IFT88-203ENST00000389373 EVI5O60447 810 aa12.3□□□□□ -0.44
IFT88-203ENST00000389373 FARP2O94887 1054 aaPredicted RBP12.3□□□□□ -0.44
IFT88-203ENST00000389373 SLC4A2P04920 1241 aa12.3□□□□□ -0.44
IFT88-203ENST00000389373 CASP7P55210 303 aa12.3□□□□□ -0.44
IFT88-203ENST00000389373 C17orf99Q6UX52 265 aa12.3□□□□□ -0.44
IFT88-203ENST00000389373 ZNF594Q96JF6 807 aaPredicted RBP12.3□□□□□ -0.44
IFT88-203ENST00000389373 PRO3102Q9H379 93 aa12.3□□□□□ -0.44
IFT88-203ENST00000389373 CNNM1Q9NRU3 951 aa12.3□□□□□ -0.44
IFT88-203ENST00000389373 MYH3P11055 1940 aa12.3□□□□□ -0.44
IFT88-203ENST00000389373 MYPNQ86TC9 1320 aa12.3□□□□□ -0.44
IFT88-203ENST00000389373 LAMB1P07942 1786 aa12.3□□□□□ -0.44
IFT88-203ENST00000389373 ECM29Q5VYK3 1845 aa12.3□□□□□ -0.44
IFT88-203ENST00000389373 TRIOBPQ9H2D6 2365 aa12.29□□□□□ -0.44
IFT88-203ENST00000389373 OTOFQ9HC10 1997 aa12.29□□□□□ -0.44
IFT88-203ENST00000389373 HIBADHP31937 336 aaKnown RBP12.29□□□□□ -0.44
IFT88-203ENST00000389373 GYG1P46976 350 aa12.29□□□□□ -0.44
IFT88-203ENST00000389373 LDHAL6AQ6ZMR3 332 aa12.29□□□□□ -0.44
IFT88-203ENST00000389373 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.29□□□□□ -0.44
IFT88-203ENST00000389373 U2AF1L4Q8WU68 220 aaKnown RBP12.29□□□□□ -0.44
IFT88-203ENST00000389373 ZCCHC17Q9NP64 241 aaKnown RBP12.29□□□□□ -0.44
IFT88-203ENST00000389373 FAM205AQ6ZU69 1335 aa12.29□□□□□ -0.44
IFT88-203ENST00000389373 PDHXO00330 501 aa12.28□□□□□ -0.44
IFT88-203ENST00000389373 TFRCP02786 760 aaKnown RBP12.28□□□□□ -0.44
IFT88-203ENST00000389373 CHAF1AQ13111 956 aaPredicted RBP12.28□□□□□ -0.44
IFT88-203ENST00000389373 PPIL2Q13356 520 aa12.28□□□□□ -0.44
IFT88-203ENST00000389373 FKBP5Q13451 457 aaPredicted RBP12.28□□□□□ -0.44
IFT88-203ENST00000389373 MIGA2Q7L4E1 593 aa12.28□□□□□ -0.44
IFT88-203ENST00000389373 UBE2Q1Q7Z7E8 422 aa12.28□□□□□ -0.44
IFT88-203ENST00000389373 TDRD7Q8NHU6 1098 aaKnown RBP12.28□□□□□ -0.44
IFT88-203ENST00000389373 TSR2Q969E8 191 aaKnown RBP12.28□□□□□ -0.44
IFT88-203ENST00000389373 UNC93B1Q9H1C4 597 aa12.28□□□□□ -0.44
IFT88-203ENST00000389373 TMOD2Q9NZR1 351 aa12.28□□□□□ -0.44
IFT88-203ENST00000389373 IQSEC3Q9UPP2 1182 aaPredicted RBP12.28□□□□□ -0.44
IFT88-203ENST00000389373 BRCA2P51587 3418 aa12.28□□□□□ -0.44
IFT88-203ENST00000389373 FRAT2O75474 233 aaPredicted RBP12.27□□□□□ -0.45
IFT88-203ENST00000389373 SGPL1O95470 568 aa12.27□□□□□ -0.45
IFT88-203ENST00000389373 MNX1P50219 401 aaPredicted RBP12.27□□□□□ -0.45
IFT88-203ENST00000389373 FOXO4P98177 505 aa12.27□□□□□ -0.45
IFT88-203ENST00000389373 PRKCZQ05513 592 aa12.27□□□□□ -0.45
IFT88-203ENST00000389373 GRIK5Q16478 980 aa12.27□□□□□ -0.45
IFT88-203ENST00000389373 CCDC57Q2TAC2 916 aa12.27□□□□□ -0.45
IFT88-203ENST00000389373 LMBR1LQ6UX01 489 aa12.27□□□□□ -0.45
IFT88-203ENST00000389373 DNAAF4Q8WXU2 420 aa12.27□□□□□ -0.45
IFT88-203ENST00000389373 GABRQQ9UN88 632 aa12.27□□□□□ -0.45
IFT88-203ENST00000389373 A0A1W2PPC1 479 aa12.26□□□□□ -0.45
IFT88-203ENST00000389373 INPP5BP32019 993 aa12.26□□□□□ -0.45
IFT88-203ENST00000389373 PPATQ06203 517 aa12.26□□□□□ -0.45
IFT88-203ENST00000389373 FLIIQ13045 1269 aa12.26□□□□□ -0.45
IFT88-203ENST00000389373 TWISTNBQ3B726 338 aaPredicted RBP12.26□□□□□ -0.45
IFT88-203ENST00000389373 DCAF15Q66K64 600 aa12.26□□□□□ -0.45
IFT88-203ENST00000389373 ANKRD23Q86SG2 305 aa12.26□□□□□ -0.45
IFT88-203ENST00000389373 VPS37DQ86XT2 251 aa12.26□□□□□ -0.45
IFT88-203ENST00000389373 LINS1Q8NG48 757 aa12.26□□□□□ -0.45
IFT88-203ENST00000389373 HOOK2Q96ED9 719 aa12.26□□□□□ -0.45
IFT88-203ENST00000389373 FAM84BQ96KN1 310 aaPredicted RBP12.26□□□□□ -0.45
IFT88-203ENST00000389373 TAOK2Q9UL54 1235 aa12.26□□□□□ -0.45
IFT88-203ENST00000389373 FCGRTP55899 365 aa12.25□□□□□ -0.45
IFT88-203ENST00000389373 UBE4AQ14139 1066 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms