RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ZKSCAN3Q9BRR0 538 aa14.96□□□□□ -0.01
TRAPPC9-201ENST00000389328 GCKRQ14397 625 aa14.96□□□□□ -0.02
TRAPPC9-201ENST00000389328 NBPF6Q5VWK0 638 aa14.96□□□□□ -0.02
TRAPPC9-201ENST00000389328 CATIPQ7Z7H3 387 aa14.96□□□□□ -0.02
TRAPPC9-201ENST00000389328 NBPF4Q96M43 638 aa14.96□□□□□ -0.02
TRAPPC9-201ENST00000389328 VPS16Q9H269 839 aa14.96□□□□□ -0.02
TRAPPC9-201ENST00000389328 G3V3G9 751 aa14.95□□□□□ -0.02
TRAPPC9-201ENST00000389328 DCAF8Q5TAQ9 597 aa14.95□□□□□ -0.02
TRAPPC9-201ENST00000389328 GPR161Q8N6U8 529 aaKnown RBP14.95□□□□□ -0.02
TRAPPC9-201ENST00000389328 GDAP1L1Q96MZ0 367 aa14.95□□□□□ -0.02
TRAPPC9-201ENST00000389328 RNF41Q9H4P4 317 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC9-201ENST00000389328 PPP2R2CQ9Y2T4 447 aa14.95□□□□□ -0.02
TRAPPC9-201ENST00000389328 MYO5CQ9NQX4 1742 aa14.95□□□□□ -0.02
TRAPPC9-201ENST00000389328 PSDA5PKW4 1024 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC9-201ENST00000389328 AKR1B10O60218 316 aa14.95□□□□□ -0.02
TRAPPC9-201ENST00000389328 UBA7P41226 1012 aa14.95□□□□□ -0.02
TRAPPC9-201ENST00000389328 TTF1Q15361 905 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC9-201ENST00000389328 CHRNA2Q15822 529 aa14.95□□□□□ -0.02
TRAPPC9-201ENST00000389328 ZNF827Q17R98 1081 aa14.95□□□□□ -0.02
TRAPPC9-201ENST00000389328 CCDC96Q2M329 555 aa14.95□□□□□ -0.02
TRAPPC9-201ENST00000389328 SOGA3Q5TF21 947 aa14.95□□□□□ -0.02
TRAPPC9-201ENST00000389328 KRT40Q6A162 431 aa14.95□□□□□ -0.02
TRAPPC9-201ENST00000389328 IL25Q9H293 177 aa14.95□□□□□ -0.02
TRAPPC9-201ENST00000389328 PROSER3Q2NL68 480 aa14.95□□□□□ -0.02
TRAPPC9-201ENST00000389328 ANKLE2Q86XL3 938 aa14.95□□□□□ -0.02
TRAPPC9-201ENST00000389328 CROCC2H7BZ55 1655 aa14.95□□□□□ -0.02
TRAPPC9-201ENST00000389328 EFCAB8A8MWE9 144 aa14.94□□□□□ -0.02
TRAPPC9-201ENST00000389328 EBAG9O00559 213 aa14.94□□□□□ -0.02
TRAPPC9-201ENST00000389328 IRX3P78415 501 aaPredicted RBP14.94□□□□□ -0.02
TRAPPC9-201ENST00000389328 CABP5Q9NP86 173 aa14.94□□□□□ -0.02
TRAPPC9-201ENST00000389328 ARHGEF10O15013 1369 aa14.94□□□□□ -0.02
TRAPPC9-201ENST00000389328 UBXN1Q04323 297 aa14.94□□□□□ -0.02
TRAPPC9-201ENST00000389328 METTL22Q9BUU2 404 aaPredicted RBP14.94□□□□□ -0.02
TRAPPC9-201ENST00000389328 MED14O60244 1454 aa14.94□□□□□ -0.02
TRAPPC9-201ENST00000389328 CCDC194A0A1B0GVG4 234 aa14.94□□□□□ -0.02
TRAPPC9-201ENST00000389328 CKAP4Q07065 602 aaKnown RBP14.94□□□□□ -0.02
TRAPPC9-201ENST00000389328 SPAG1Q07617 926 aa14.94□□□□□ -0.02
TRAPPC9-201ENST00000389328 RESTQ13127 1097 aa14.94□□□□□ -0.02
TRAPPC9-201ENST00000389328 SPECC1LQ69YQ0 1117 aa14.94□□□□□ -0.02
TRAPPC9-201ENST00000389328 NSUN7Q8NE18 718 aaKnown RBP14.94□□□□□ -0.02
TRAPPC9-201ENST00000389328 IP6K1Q92551 441 aa14.94□□□□□ -0.02
TRAPPC9-201ENST00000389328 RCOR1Q9UKL0 485 aa14.94□□□□□ -0.02
TRAPPC9-201ENST00000389328 MAPK8IP1Q9UQF2 711 aa14.94□□□□□ -0.02
TRAPPC9-201ENST00000389328 MAP3K4Q9Y6R4 1608 aa14.94□□□□□ -0.02
TRAPPC9-201ENST00000389328 IQSEC2Q5JU85 1478 aa14.94□□□□□ -0.02
TRAPPC9-201ENST00000389328 ERLIN2O94905 339 aa14.94□□□□□ -0.02
TRAPPC9-201ENST00000389328 CT47A1Q5JQC4 288 aaPredicted RBP14.94□□□□□ -0.02
TRAPPC9-201ENST00000389328 MAATS1Q7Z4T9 603 aa14.94□□□□□ -0.02
TRAPPC9-201ENST00000389328 CNGA4Q8IV77 575 aa14.94□□□□□ -0.02
TRAPPC9-201ENST00000389328 MYO6Q9UM54 1294 aa14.94□□□□□ -0.02
TRAPPC9-201ENST00000389328 IQSEC3Q9UPP2 1182 aaPredicted RBP14.94□□□□□ -0.02
TRAPPC9-201ENST00000389328 TNRQ92752 1358 aa14.93□□□□□ -0.02
TRAPPC9-201ENST00000389328 ZEB2O60315 1214 aa14.93□□□□□ -0.02
TRAPPC9-201ENST00000389328 ATP2C2O75185 946 aa14.93□□□□□ -0.02
TRAPPC9-201ENST00000389328 CYLC1P35663 651 aaPredicted RBP14.93□□□□□ -0.02
TRAPPC9-201ENST00000389328 NAPGQ99747 312 aaPredicted RBP14.93□□□□□ -0.02
TRAPPC9-201ENST00000389328 RPAP1Q9BWH6 1393 aaPredicted RBP14.93□□□□□ -0.02
TRAPPC9-201ENST00000389328 MYO1BO43795 1136 aa14.93□□□□□ -0.02
TRAPPC9-201ENST00000389328 IDEP14735 1019 aa14.93□□□□□ -0.02
TRAPPC9-201ENST00000389328 SLC4A8Q2Y0W8 1093 aa14.93□□□□□ -0.02
TRAPPC9-201ENST00000389328 SAMD1Q6SPF0 538 aaPredicted RBP14.93□□□□□ -0.02
TRAPPC9-201ENST00000389328 PLA2G4DQ86XP0 818 aa14.93□□□□□ -0.02
TRAPPC9-201ENST00000389328 EHBP1Q8NDI1 1231 aa14.93□□□□□ -0.02
TRAPPC9-201ENST00000389328 CLIC6Q96NY7 704 aa14.93□□□□□ -0.02
TRAPPC9-201ENST00000389328 UNC13BO14795 1591 aa14.93□□□□□ -0.02
TRAPPC9-201ENST00000389328 STARD3NLO95772 234 aa14.92□□□□□ -0.02
TRAPPC9-201ENST00000389328 PDIA3P30101 505 aaKnown RBP14.92□□□□□ -0.02
TRAPPC9-201ENST00000389328 IGHMBP2P38935 993 aaKnown RBP14.92□□□□□ -0.02
TRAPPC9-201ENST00000389328 HNRNPH2P55795 449 aaKnown RBP14.92□□□□□ -0.02
TRAPPC9-201ENST00000389328 CCDC178Q5BJE1 867 aa14.92□□□□□ -0.02
TRAPPC9-201ENST00000389328 CCDC122Q5T0U0 273 aa14.92□□□□□ -0.02
TRAPPC9-201ENST00000389328 ZNF790Q6PG37 636 aa14.92□□□□□ -0.02
TRAPPC9-201ENST00000389328 DIS3L2Q8IYB7 885 aaKnown RBP14.92□□□□□ -0.02
TRAPPC9-201ENST00000389328 STAMQ92783 540 aa14.92□□□□□ -0.02
TRAPPC9-201ENST00000389328 ALS2CR12Q96Q35 445 aa14.92□□□□□ -0.02
TRAPPC9-201ENST00000389328 ANGEL1Q9UNK9 670 aaKnown RBP14.92□□□□□ -0.02
TRAPPC9-201ENST00000389328 ADD1P35611 737 aaKnown RBP14.92□□□□□ -0.02
TRAPPC9-201ENST00000389328 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.92□□□□□ -0.02
TRAPPC9-201ENST00000389328 DBNLQ9UJU6 430 aaKnown RBP14.92□□□□□ -0.02
TRAPPC9-201ENST00000389328 ZBTB22O15209 634 aa14.92□□□□□ -0.02
TRAPPC9-201ENST00000389328 HSF2BPO75031 334 aa14.92□□□□□ -0.02
TRAPPC9-201ENST00000389328 PNMA6AP0CW24 399 aaPredicted RBP14.92□□□□□ -0.02
TRAPPC9-201ENST00000389328 POLA2Q14181 598 aa14.92□□□□□ -0.02
TRAPPC9-201ENST00000389328 HELBQ8NG08 1087 aaPredicted RBP14.92□□□□□ -0.02
TRAPPC9-201ENST00000389328 PLEKHG3A1L390 1219 aa14.92□□□□□ -0.02
TRAPPC9-201ENST00000389328 KRT86O43790 486 aa14.92□□□□□ -0.02
TRAPPC9-201ENST00000389328 GIGYF1O75420 1035 aaPredicted RBP14.92□□□□□ -0.02
TRAPPC9-201ENST00000389328 ATP1A3P13637 1013 aa14.92□□□□□ -0.02
TRAPPC9-201ENST00000389328 SLC5A1P13866 664 aa14.92□□□□□ -0.02
TRAPPC9-201ENST00000389328 PLCD4Q9BRC7 762 aa14.92□□□□□ -0.02
TRAPPC9-201ENST00000389328 PNPLA6Q8IY17 1366 aa14.91□□□□□ -0.02
TRAPPC9-201ENST00000389328 GPAA1O43292 621 aa14.91□□□□□ -0.02
TRAPPC9-201ENST00000389328 CUTAO60888 179 aa14.91□□□□□ -0.02
TRAPPC9-201ENST00000389328 MLKLQ8NB16 471 aa14.91□□□□□ -0.02
TRAPPC9-201ENST00000389328 ATRIPQ8WXE1 791 aa14.91□□□□□ -0.02
TRAPPC9-201ENST00000389328 ST7Q9NRC1 585 aa14.91□□□□□ -0.02
TRAPPC9-201ENST00000389328 LUC7L2Q9Y383 392 aaKnown RBP14.91□□□□□ -0.02
TRAPPC9-201ENST00000389328 EYA2O00167 538 aa14.91□□□□□ -0.02
TRAPPC9-201ENST00000389328 HSPD1P10809 573 aaKnown RBP14.91□□□□□ -0.02
TRAPPC9-201ENST00000389328 POSTNQ15063 836 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms