RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 GJA5P36382 358 aa22.5■■□□□ 1.19
RPUSD3-201ENST00000383820 TNNI2P48788 182 aa22.5■■□□□ 1.19
RPUSD3-201ENST00000383820 CAVIN4Q5BKX8 364 aa22.5■■□□□ 1.19
RPUSD3-201ENST00000383820 ANKRD44Q8N8A2 993 aa22.5■■□□□ 1.19
RPUSD3-201ENST00000383820 TEPSINQ96N21 525 aa22.5■■□□□ 1.19
RPUSD3-201ENST00000383820 OTOFQ9HC10 1997 aa22.5■■□□□ 1.19
RPUSD3-201ENST00000383820 PDE8BO95263 885 aa22.49■■□□□ 1.19
RPUSD3-201ENST00000383820 METTL24Q5JXM2 366 aa22.49■■□□□ 1.19
RPUSD3-201ENST00000383820 ERO1AQ96HE7 468 aa22.49■■□□□ 1.19
RPUSD3-201ENST00000383820 LRRC24Q50LG9 513 aa22.48■■□□□ 1.19
RPUSD3-201ENST00000383820 PRPF38BQ5VTL8 546 aaKnown RBP22.48■■□□□ 1.19
RPUSD3-201ENST00000383820 OTOP1Q7RTM1 612 aa22.48■■□□□ 1.19
RPUSD3-201ENST00000383820 VGLL2Q8N8G2 317 aa22.48■■□□□ 1.19
RPUSD3-201ENST00000383820 MRIQ9BWK5 157 aa22.48■■□□□ 1.19
RPUSD3-201ENST00000383820 TRIM17Q9Y577 477 aa22.48■■□□□ 1.19
RPUSD3-201ENST00000383820 FRAT2O75474 233 aaPredicted RBP22.47■■□□□ 1.19
RPUSD3-201ENST00000383820 OPTNQ96CV9 577 aa22.47■■□□□ 1.19
RPUSD3-201ENST00000383820 KIF16BQ96L93 1317 aa22.47■■□□□ 1.19
RPUSD3-201ENST00000383820 TCP10L2B9ZVM9 353 aa22.46■■□□□ 1.19
RPUSD3-201ENST00000383820 CRHR2Q13324 411 aa22.46■■□□□ 1.19
RPUSD3-201ENST00000383820 INTS3Q68E01 1043 aaKnown RBP22.46■■□□□ 1.19
RPUSD3-201ENST00000383820 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.46■■□□□ 1.19
RPUSD3-201ENST00000383820 PTPN18Q99952 460 aa22.46■■□□□ 1.19
RPUSD3-201ENST00000383820 ELP3Q9H9T3 547 aa22.46■■□□□ 1.19
RPUSD3-201ENST00000383820 SUGT1Q9Y2Z0 365 aa22.46■■□□□ 1.19
RPUSD3-201ENST00000383820 E9PSI1 815 aa22.45■■□□□ 1.18
RPUSD3-201ENST00000383820 MAP3K9P80192 1104 aa22.45■■□□□ 1.18
RPUSD3-201ENST00000383820 CHAF1AQ13111 956 aaPredicted RBP22.45■■□□□ 1.18
RPUSD3-201ENST00000383820 TEKT1Q969V4 418 aa22.45■■□□□ 1.18
RPUSD3-201ENST00000383820 MS4A4AQ96JQ5 239 aa22.45■■□□□ 1.18
RPUSD3-201ENST00000383820 TMEM39BQ9GZU3 492 aa22.45■■□□□ 1.18
RPUSD3-201ENST00000383820 IQSEC3Q9UPP2 1182 aaPredicted RBP22.45■■□□□ 1.18
RPUSD3-201ENST00000383820 MAST3O60307 1309 aa22.44■■□□□ 1.18
RPUSD3-201ENST00000383820 GRIK5Q16478 980 aa22.44■■□□□ 1.18
RPUSD3-201ENST00000383820 CDAN1Q8IWY9 1227 aa22.44■■□□□ 1.18
RPUSD3-201ENST00000383820 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.44■■□□□ 1.18
RPUSD3-201ENST00000383820 ZDHHC15Q96MV8 337 aa22.44■■□□□ 1.18
RPUSD3-201ENST00000383820 USP44Q9H0E7 712 aa22.44■■□□□ 1.18
RPUSD3-201ENST00000383820 IFIT1P09914 478 aaKnown RBP22.43■■□□□ 1.18
RPUSD3-201ENST00000383820 GTF2A2P52657 109 aa22.43■■□□□ 1.18
RPUSD3-201ENST00000383820 SP3Q02447 781 aa22.43■■□□□ 1.18
RPUSD3-201ENST00000383820 VGLL4Q14135 290 aa22.43■■□□□ 1.18
RPUSD3-201ENST00000383820 PUM3Q15397 648 aaKnown RBP22.43■■□□□ 1.18
RPUSD3-201ENST00000383820 FKBP1CQ5VVH2 108 aa22.43■■□□□ 1.18
RPUSD3-201ENST00000383820 SSH1Q8WYL5 1049 aa22.43■■□□□ 1.18
RPUSD3-201ENST00000383820 PTPN22Q9Y2R2 807 aa22.43■■□□□ 1.18
RPUSD3-201ENST00000383820 CSADQ9Y600 493 aa22.43■■□□□ 1.18
RPUSD3-201ENST00000383820 FGFR2P21802 821 aa22.42■■□□□ 1.18
RPUSD3-201ENST00000383820 BCAMP50895 628 aa22.42■■□□□ 1.18
RPUSD3-201ENST00000383820 FAM83AQ86UY5 434 aa22.42■■□□□ 1.18
RPUSD3-201ENST00000383820 CD99L2Q8TCZ2 262 aa22.42■■□□□ 1.18
RPUSD3-201ENST00000383820 HOOK2Q96ED9 719 aa22.42■■□□□ 1.18
RPUSD3-201ENST00000383820 TMOD2Q9NZR1 351 aa22.42■■□□□ 1.18
RPUSD3-201ENST00000383820 ALDH1L2Q3SY69 923 aa22.41■■□□□ 1.18
RPUSD3-201ENST00000383820 KLHDC4Q8TBB5 520 aa22.41■■□□□ 1.18
RPUSD3-201ENST00000383820 EFCC1Q9HA90 598 aa22.41■■□□□ 1.18
RPUSD3-201ENST00000383820 HHIPL2Q6UWX4 724 aa22.4■■□□□ 1.18
RPUSD3-201ENST00000383820 BRI3BPQ8WY22 251 aa22.4■■□□□ 1.18
RPUSD3-201ENST00000383820 RPAP1Q9BWH6 1393 aaPredicted RBP22.39■■□□□ 1.18
RPUSD3-201ENST00000383820 CCL15-CCL14A0A0B4J2E2 113 aa22.39■■□□□ 1.17
RPUSD3-201ENST00000383820 SPDYE5A6NIY4 337 aa22.39■■□□□ 1.17
RPUSD3-201ENST00000383820 EYA2O00167 538 aa22.39■■□□□ 1.17
RPUSD3-201ENST00000383820 SLFN5Q08AF3 891 aa22.39■■□□□ 1.17
RPUSD3-201ENST00000383820 ARHGEF6Q15052 776 aa22.39■■□□□ 1.17
RPUSD3-201ENST00000383820 CCL15Q16663 113 aa22.39■■□□□ 1.17
RPUSD3-201ENST00000383820 APOBEC3HQ6NTF7 200 aaKnown RBP22.39■■□□□ 1.17
RPUSD3-201ENST00000383820 CNKSR2Q8WXI2 1034 aa22.39■■□□□ 1.17
RPUSD3-201ENST00000383820 ZFYVE28Q9HCC9 887 aa22.39■■□□□ 1.17
RPUSD3-201ENST00000383820 PCDH10Q9P2E7 1040 aa22.39■■□□□ 1.17
RPUSD3-201ENST00000383820 RBBP6Q7Z6E9 1792 aaKnown RBP22.39■■□□□ 1.17
RPUSD3-201ENST00000383820 SLC5A1P13866 664 aa22.38■■□□□ 1.17
RPUSD3-201ENST00000383820 RFX5P48382 616 aaPredicted RBP22.38■■□□□ 1.17
RPUSD3-201ENST00000383820 TAF1CQ15572 869 aaPredicted RBP22.38■■□□□ 1.17
RPUSD3-201ENST00000383820 WDR66Q8TBY9 1149 aa22.38■■□□□ 1.17
RPUSD3-201ENST00000383820 LPIN2Q92539 896 aa22.38■■□□□ 1.17
RPUSD3-201ENST00000383820 ARMC5Q96C12 935 aa22.38■■□□□ 1.17
RPUSD3-201ENST00000383820 OTUD5Q96G74 571 aa22.38■■□□□ 1.17
RPUSD3-201ENST00000383820 FBXO3Q9UK99 471 aa22.38■■□□□ 1.17
RPUSD3-201ENST00000383820 WDHD1O75717 1129 aaPredicted RBP22.37■■□□□ 1.17
RPUSD3-201ENST00000383820 CACNB3P54284 484 aa22.37■■□□□ 1.17
RPUSD3-201ENST00000383820 ERO1BQ86YB8 467 aa22.37■■□□□ 1.17
RPUSD3-201ENST00000383820 ZCCHC17Q9NP64 241 aaKnown RBP22.37■■□□□ 1.17
RPUSD3-201ENST00000383820 SNCAIPQ9Y6H5 919 aa22.37■■□□□ 1.17
RPUSD3-201ENST00000383820 MYH13Q9UKX3 1938 aa22.37■■□□□ 1.17
RPUSD3-201ENST00000383820 DCAF15Q66K64 600 aa22.36■■□□□ 1.17
RPUSD3-201ENST00000383820 WRNIP1Q96S55 665 aa22.36■■□□□ 1.17
RPUSD3-201ENST00000383820 CETPP11597 493 aa22.35■■□□□ 1.17
RPUSD3-201ENST00000383820 FAM43AQ8N2R8 423 aa22.35■■□□□ 1.17
RPUSD3-201ENST00000383820 POTEFA5A3E0 1075 aa22.34■■□□□ 1.17
RPUSD3-201ENST00000383820 ATG9AQ7Z3C6 839 aa22.34■■□□□ 1.17
RPUSD3-201ENST00000383820 CIAO1O76071 339 aa22.33■■□□□ 1.17
RPUSD3-201ENST00000383820 CAP1Q01518 475 aa22.33■■□□□ 1.17
RPUSD3-201ENST00000383820 PPIL2Q13356 520 aa22.33■■□□□ 1.17
RPUSD3-201ENST00000383820 SNAPC2Q13487 334 aa22.33■■□□□ 1.17
RPUSD3-201ENST00000383820 FAM151AQ8WW52 585 aa22.33■■□□□ 1.17
RPUSD3-201ENST00000383820 ZNF341Q9BYN7 854 aa22.33■■□□□ 1.17
RPUSD3-201ENST00000383820 SMC4Q9NTJ3 1288 aa22.33■■□□□ 1.17
RPUSD3-201ENST00000383820 HDAC5Q9UQL6 1122 aa22.33■■□□□ 1.17
RPUSD3-201ENST00000383820 HTTP42858 3142 aa22.33■■□□□ 1.16
RPUSD3-201ENST00000383820 TLR2O60603 784 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms