RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 MYO1BO43795 1136 aa21.5■■□□□ 1.03
CD9-202ENST00000382515 CYP2E1P05181 493 aaPredicted RBP21.5■■□□□ 1.03
CD9-202ENST00000382515 MX1P20591 662 aa21.5■■□□□ 1.03
CD9-202ENST00000382515 ZAP70P43403 619 aa21.5■■□□□ 1.03
CD9-202ENST00000382515 EAPPQ56P03 285 aaPredicted RBP21.5■■□□□ 1.03
CD9-202ENST00000382515 PPP4R2Q9NY27 417 aa21.5■■□□□ 1.03
CD9-202ENST00000382515 SCN9AQ15858 1988 aa21.49■■□□□ 1.03
CD9-202ENST00000382515 FSTL1Q12841 308 aa21.49■■□□□ 1.03
CD9-202ENST00000382515 MAP3K12Q12852 859 aa21.49■■□□□ 1.03
CD9-202ENST00000382515 TBC1D10BQ4KMP7 808 aaPredicted RBP21.49■■□□□ 1.03
CD9-202ENST00000382515 RBM26Q5T8P6 1007 aaKnown RBP21.49■■□□□ 1.03
CD9-202ENST00000382515 TICAM2Q86XR7 235 aa21.49■■□□□ 1.03
CD9-202ENST00000382515 DZIP1Q86YF9 867 aaKnown RBP21.49■■□□□ 1.03
CD9-202ENST00000382515 ZBED3Q96IU2 234 aaPredicted RBP21.49■■□□□ 1.03
CD9-202ENST00000382515 ZDHHC15Q96MV8 337 aa21.49■■□□□ 1.03
CD9-202ENST00000382515 LNPKQ9C0E8 428 aa21.49■■□□□ 1.03
CD9-202ENST00000382515 BOLA2Q9H3K6 86 aa21.49■■□□□ 1.03
CD9-202ENST00000382515 SNRKQ9NRH2 765 aa21.49■■□□□ 1.03
CD9-202ENST00000382515 CLEC11AQ9Y240 323 aa21.49■■□□□ 1.03
CD9-202ENST00000382515 SCN4AP35499 1836 aa21.48■■□□□ 1.03
CD9-202ENST00000382515 WNT10BO00744 389 aa21.48■■□□□ 1.03
CD9-202ENST00000382515 MAP4K4O95819 1239 aaPredicted RBP21.48■■□□□ 1.03
CD9-202ENST00000382515 PRDX5P30044 214 aa21.48■■□□□ 1.03
CD9-202ENST00000382515 CRKP46108 304 aa21.48■■□□□ 1.03
CD9-202ENST00000382515 RBM5P52756 815 aaKnown RBP eCLIP21.48■■□□□ 1.03
CD9-202ENST00000382515 HIRAP54198 1017 aaPredicted RBP21.48■■□□□ 1.03
CD9-202ENST00000382515 CFAP100Q494V2 611 aa21.48■■□□□ 1.03
CD9-202ENST00000382515 CHADLQ6NUI6 762 aa21.48■■□□□ 1.03
CD9-202ENST00000382515 PI16Q6UXB8 463 aa21.48■■□□□ 1.03
CD9-202ENST00000382515 SMC1BQ8NDV3 1235 aa21.48■■□□□ 1.03
CD9-202ENST00000382515 OSBPL3Q9H4L5 887 aa21.48■■□□□ 1.03
CD9-202ENST00000382515 SALL3Q9BXA9 1300 aa21.48■■□□□ 1.03
CD9-202ENST00000382515 SPDYE2BA6NHP3 402 aa21.47■■□□□ 1.03
CD9-202ENST00000382515 SPDYE6P0CI01 402 aa21.47■■□□□ 1.03
CD9-202ENST00000382515 PDE1AP54750 535 aa21.47■■□□□ 1.03
CD9-202ENST00000382515 TRPM4Q8TD43 1214 aa21.47■■□□□ 1.03
CD9-202ENST00000382515 DCPSQ96C86 337 aaKnown RBP21.47■■□□□ 1.03
CD9-202ENST00000382515 RAI14Q9P0K7 980 aa21.47■■□□□ 1.03
CD9-202ENST00000382515 AOX1Q06278 1338 aa21.47■■□□□ 1.03
CD9-202ENST00000382515 PITPNM2Q9BZ72 1349 aa21.47■■□□□ 1.03
CD9-202ENST00000382515 SHTN1A0MZ66 631 aa21.46■■□□□ 1.03
CD9-202ENST00000382515 GRIK5Q16478 980 aa21.46■■□□□ 1.03
CD9-202ENST00000382515 LRRFIP1Q32MZ4 808 aaKnown RBP21.46■■□□□ 1.03
CD9-202ENST00000382515 TBC1D9Q6ZT07 1266 aa21.46■■□□□ 1.03
CD9-202ENST00000382515 CERS3Q8IU89 383 aa21.46■■□□□ 1.03
CD9-202ENST00000382515 NSUN4Q96CB9 384 aaKnown RBP21.46■■□□□ 1.03
CD9-202ENST00000382515 PAG1Q9NWQ8 432 aa21.46■■□□□ 1.03
CD9-202ENST00000382515 ARAP2Q8WZ64 1704 aa21.46■■□□□ 1.03
CD9-202ENST00000382515 COL1A1P02452 1464 aaPredicted RBP21.45■■□□□ 1.03
CD9-202ENST00000382515 MECOMQ03112 1051 aa21.45■■□□□ 1.02
CD9-202ENST00000382515 ZSCAN25Q6NSZ9 544 aa21.45■■□□□ 1.02
CD9-202ENST00000382515 CDC37L1Q7L3B6 337 aa21.45■■□□□ 1.02
CD9-202ENST00000382515 PRMT6Q96LA8 375 aaPredicted RBP21.45■■□□□ 1.02
CD9-202ENST00000382515 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.45■■□□□ 1.02
CD9-202ENST00000382515 EGFRP00533 1210 aa21.44■■□□□ 1.02
CD9-202ENST00000382515 NAA16Q6N069 864 aaPredicted RBP21.44■■□□□ 1.02
CD9-202ENST00000382515 PI4K2BQ8TCG2 481 aa21.44■■□□□ 1.02
CD9-202ENST00000382515 DNAJC2Q99543 621 aaKnown RBP21.44■■□□□ 1.02
CD9-202ENST00000382515 PSME4Q14997 1843 aa21.43■■□□□ 1.02
CD9-202ENST00000382515 GOLIM4O00461 696 aa21.43■■□□□ 1.02
CD9-202ENST00000382515 BAG3O95817 575 aa21.43■■□□□ 1.02
CD9-202ENST00000382515 NBPF9Q3BBW0 867 aa21.43■■□□□ 1.02
CD9-202ENST00000382515 FKBP1CQ5VVH2 108 aa21.43■■□□□ 1.02
CD9-202ENST00000382515 APOBEC3HQ6NTF7 200 aaKnown RBP21.43■■□□□ 1.02
CD9-202ENST00000382515 PLEKHM2Q8IWE5 1019 aa21.43■■□□□ 1.02
CD9-202ENST00000382515 CNTROBQ8N137 903 aa21.43■■□□□ 1.02
CD9-202ENST00000382515 GAKO14976 1311 aa21.43■■□□□ 1.02
CD9-202ENST00000382515 GPR75-ASB3A0A0A6YYF3 556 aa21.42■■□□□ 1.02
CD9-202ENST00000382515 IDH1O75874 414 aaKnown RBP21.42■■□□□ 1.02
CD9-202ENST00000382515 TNFAIP1Q13829 316 aa21.42■■□□□ 1.02
CD9-202ENST00000382515 APOBEC3FQ8IUX4 373 aaKnown RBP21.42■■□□□ 1.02
CD9-202ENST00000382515 SULF1Q8IWU6 871 aa21.42■■□□□ 1.02
CD9-202ENST00000382515 OTUD7AQ8TE49 926 aaPredicted RBP21.42■■□□□ 1.02
CD9-202ENST00000382515 NOL10Q9BSC4 688 aaKnown RBP21.42■■□□□ 1.02
CD9-202ENST00000382515 ANTXR1Q9H6X2 564 aa21.42■■□□□ 1.02
CD9-202ENST00000382515 PIH1D3Q9NQM4 214 aaKnown RBP21.42■■□□□ 1.02
CD9-202ENST00000382515 PLCG2P16885 1265 aa21.41■■□□□ 1.02
CD9-202ENST00000382515 PPP4CP60510 307 aa21.41■■□□□ 1.02
CD9-202ENST00000382515 TMOD2Q9NZR1 351 aa21.41■■□□□ 1.02
CD9-202ENST00000382515 DAGLAQ9Y4D2 1042 aa21.41■■□□□ 1.02
CD9-202ENST00000382515 MROH7-TTC4A0A0A0MT08 1334 aa21.4■■□□□ 1.02
CD9-202ENST00000382515 ZFYP08048 801 aaPredicted RBP21.4■■□□□ 1.02
CD9-202ENST00000382515 POTEIP0CG38 1075 aa21.4■■□□□ 1.02
CD9-202ENST00000382515 POTEJP0CG39 1038 aa21.4■■□□□ 1.02
CD9-202ENST00000382515 DIXDC1Q155Q3 683 aa21.4■■□□□ 1.02
CD9-202ENST00000382515 SPDYE2Q495Y8 402 aa21.4■■□□□ 1.02
CD9-202ENST00000382515 SLC9C2Q5TAH2 1124 aa21.4■■□□□ 1.02
CD9-202ENST00000382515 ANGEL2Q5VTE6 544 aaKnown RBP21.4■■□□□ 1.02
CD9-202ENST00000382515 KBTBD3Q8NAB2 608 aa21.4■■□□□ 1.02
CD9-202ENST00000382515 EVI5LQ96CN4 794 aa21.4■■□□□ 1.02
CD9-202ENST00000382515 PPP2R3BQ9Y5P8 575 aa21.4■■□□□ 1.02
CD9-202ENST00000382515 TNNI2P48788 182 aa21.39■■□□□ 1.01
CD9-202ENST00000382515 UBE3CQ15386 1083 aa21.39■■□□□ 1.01
CD9-202ENST00000382515 MAP1SQ66K74 1059 aaPredicted RBP21.39■■□□□ 1.01
CD9-202ENST00000382515 KRT26Q7Z3Y9 468 aa21.39■■□□□ 1.01
CD9-202ENST00000382515 GGA3Q9NZ52 723 aa21.39■■□□□ 1.01
CD9-202ENST00000382515 ZNF70Q9UC06 446 aaPredicted RBP21.39■■□□□ 1.01
CD9-202ENST00000382515 NPM3O75607 178 aaKnown RBP21.38■■□□□ 1.01
CD9-202ENST00000382515 ITGBL1O95965 494 aaPredicted RBP21.38■■□□□ 1.01
CD9-202ENST00000382515 TDRD3Q9H7E2 651 aaKnown RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms