RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 INHBEP58166 350 aa17.17■□□□□ 0.34
VLDLR-202ENST00000382099 PTH1RQ03431 593 aa17.17■□□□□ 0.34
VLDLR-202ENST00000382099 DPF2Q92785 391 aa17.17■□□□□ 0.34
VLDLR-202ENST00000382099 CRYMQ14894 314 aa17.17■□□□□ 0.34
VLDLR-202ENST00000382099 SF3A1Q15459 793 aaKnown RBP17.17■□□□□ 0.34
VLDLR-202ENST00000382099 NME9Q86XW9 330 aa17.17■□□□□ 0.34
VLDLR-202ENST00000382099 CNTROBQ8N137 903 aa17.17■□□□□ 0.34
VLDLR-202ENST00000382099 PNMA6EA0A0J9YXQ4 647 aa17.16■□□□□ 0.34
VLDLR-202ENST00000382099 GOLGA6CA6NDK9 693 aa17.16■□□□□ 0.34
VLDLR-202ENST00000382099 GOLGA6DP0CG33 693 aa17.16■□□□□ 0.34
VLDLR-202ENST00000382099 ADKP55263 362 aaKnown RBP17.16■□□□□ 0.34
VLDLR-202ENST00000382099 PSMD2Q13200 908 aa17.16■□□□□ 0.34
VLDLR-202ENST00000382099 GOLGA6AQ9NYA3 693 aa17.16■□□□□ 0.34
VLDLR-202ENST00000382099 MIS18AQ9NYP9 233 aa17.16■□□□□ 0.34
VLDLR-202ENST00000382099 TAOK2Q9UL54 1235 aa17.16■□□□□ 0.34
VLDLR-202ENST00000382099 YTHDC2Q9H6S0 1430 aaKnown RBP17.16■□□□□ 0.34
VLDLR-202ENST00000382099 CTAGE15A4D2H0 777 aa17.16■□□□□ 0.34
VLDLR-202ENST00000382099 ENO4A6NNW6 628 aa17.16■□□□□ 0.34
VLDLR-202ENST00000382099 PPP1R12BO60237 982 aaPredicted RBP17.16■□□□□ 0.34
VLDLR-202ENST00000382099 CTAGE8P0CG41 777 aa17.16■□□□□ 0.34
VLDLR-202ENST00000382099 CTAGE6Q86UF2 777 aa17.16■□□□□ 0.34
VLDLR-202ENST00000382099 CTAGE4Q8IX94 777 aa17.16■□□□□ 0.34
VLDLR-202ENST00000382099 ETAA1Q9NY74 926 aa17.16■□□□□ 0.34
VLDLR-202ENST00000382099 TMEM232C9JQI7 657 aa17.15■□□□□ 0.34
VLDLR-202ENST00000382099 EZRP15311 586 aaKnown RBP17.15■□□□□ 0.34
VLDLR-202ENST00000382099 FAM160A1Q05DH4 1040 aa17.15■□□□□ 0.34
VLDLR-202ENST00000382099 MTX1Q13505 466 aa17.15■□□□□ 0.34
VLDLR-202ENST00000382099 PREPLQ4J6C6 727 aaPredicted RBP17.15■□□□□ 0.34
VLDLR-202ENST00000382099 ZNF569Q5MCW4 686 aa17.15■□□□□ 0.34
VLDLR-202ENST00000382099 ZBTB10Q96DT7 871 aa17.15■□□□□ 0.34
VLDLR-202ENST00000382099 ZNF202O95125 648 aa17.15■□□□□ 0.34
VLDLR-202ENST00000382099 FAM69CQ0P6D2 419 aa17.15■□□□□ 0.34
VLDLR-202ENST00000382099 NECTIN2Q92692 538 aa17.15■□□□□ 0.34
VLDLR-202ENST00000382099 RBM33Q96EV2 1170 aaKnown RBP17.15■□□□□ 0.34
VLDLR-202ENST00000382099 CAPS2Q9BXY5 557 aa17.15■□□□□ 0.34
VLDLR-202ENST00000382099 NUCKS1Q9H1E3 243 aaKnown RBP17.15■□□□□ 0.34
VLDLR-202ENST00000382099 KLC4Q9NSK0 619 aa17.15■□□□□ 0.34
VLDLR-202ENST00000382099 GUCY1B3Q02153 619 aa17.15■□□□□ 0.34
VLDLR-202ENST00000382099 KIFC2Q96AC6 838 aa17.15■□□□□ 0.34
VLDLR-202ENST00000382099 KIF5CO60282 957 aa17.14■□□□□ 0.33
VLDLR-202ENST00000382099 NAP1L1P55209 391 aaKnown RBP17.14■□□□□ 0.33
VLDLR-202ENST00000382099 SH3GL3Q99963 347 aa17.14■□□□□ 0.33
VLDLR-202ENST00000382099 A1CFQ9NQ94 594 aaKnown RBP17.14■□□□□ 0.33
VLDLR-202ENST00000382099 CDC23Q9UJX2 597 aa17.14■□□□□ 0.33
VLDLR-202ENST00000382099 ZFYVE9O95405 1425 aa17.14■□□□□ 0.33
VLDLR-202ENST00000382099 KNDC1Q76NI1 1749 aa17.14■□□□□ 0.33
VLDLR-202ENST00000382099 STIM1Q13586 685 aa17.14■□□□□ 0.33
VLDLR-202ENST00000382099 NUTM2GQ5VZR2 741 aa17.14■□□□□ 0.33
VLDLR-202ENST00000382099 ZNF483Q8TF39 744 aaPredicted RBP17.14■□□□□ 0.33
VLDLR-202ENST00000382099 FANCLQ9NW38 375 aa17.14■□□□□ 0.33
VLDLR-202ENST00000382099 SYF2O95926 243 aaKnown RBP17.13■□□□□ 0.33
VLDLR-202ENST00000382099 USP5P45974 858 aa17.13■□□□□ 0.33
VLDLR-202ENST00000382099 BLOC1S2Q6QNY1 142 aa17.13■□□□□ 0.33
VLDLR-202ENST00000382099 PARD3BQ8TEW8 1205 aa17.13■□□□□ 0.33
VLDLR-202ENST00000382099 PIK3R5Q8WYR1 880 aa17.13■□□□□ 0.33
VLDLR-202ENST00000382099 SPDL1Q96EA4 605 aa17.13■□□□□ 0.33
VLDLR-202ENST00000382099 ZSWIM6Q9HCJ5 1215 aa17.13■□□□□ 0.33
VLDLR-202ENST00000382099 CBFA2T2O43439 604 aa17.13■□□□□ 0.33
VLDLR-202ENST00000382099 ZEB2O60315 1214 aa17.13■□□□□ 0.33
VLDLR-202ENST00000382099 GGCXP38435 758 aa17.13■□□□□ 0.33
VLDLR-202ENST00000382099 SNX1Q13596 522 aa17.13■□□□□ 0.33
VLDLR-202ENST00000382099 HINFPQ9BQA5 517 aa17.13■□□□□ 0.33
VLDLR-202ENST00000382099 RAB21Q9UL25 225 aa17.13■□□□□ 0.33
VLDLR-202ENST00000382099 CDHR2Q9BYE9 1310 aa17.13■□□□□ 0.33
VLDLR-202ENST00000382099 ZMYND10O75800 440 aa17.13■□□□□ 0.33
VLDLR-202ENST00000382099 KIF24Q5T7B8 1368 aa17.12■□□□□ 0.33
VLDLR-202ENST00000382099 MYBL2P10244 700 aa17.12■□□□□ 0.33
VLDLR-202ENST00000382099 COL9A3Q14050 684 aaPredicted RBP17.12■□□□□ 0.33
VLDLR-202ENST00000382099 TMEM131LA2VDJ0 1609 aa17.12■□□□□ 0.33
VLDLR-202ENST00000382099 SURF6O75683 361 aaKnown RBP17.12■□□□□ 0.33
VLDLR-202ENST00000382099 SLC3A2P08195 630 aaKnown RBP17.12■□□□□ 0.33
VLDLR-202ENST00000382099 DDR1Q08345 913 aa17.12■□□□□ 0.33
VLDLR-202ENST00000382099 HDGFL2Q7Z4V5 671 aaPredicted RBP17.12■□□□□ 0.33
VLDLR-202ENST00000382099 KCNB2Q92953 911 aa17.12■□□□□ 0.33
VLDLR-202ENST00000382099 IPO7O95373 1038 aaKnown RBP17.11■□□□□ 0.33
VLDLR-202ENST00000382099 RBBP5Q15291 538 aaKnown RBP17.11■□□□□ 0.33
VLDLR-202ENST00000382099 RUFY2Q8WXA3 655 aa17.11■□□□□ 0.33
VLDLR-202ENST00000382099 ITFG2Q969R8 447 aa17.11■□□□□ 0.33
VLDLR-202ENST00000382099 IL17RAQ96F46 866 aa17.11■□□□□ 0.33
VLDLR-202ENST00000382099 POLD4Q9HCU8 107 aa17.11■□□□□ 0.33
VLDLR-202ENST00000382099 MAP2P11137 1827 aaKnown RBP17.11■□□□□ 0.33
VLDLR-202ENST00000382099 ADCY2Q08462 1091 aa17.11■□□□□ 0.33
VLDLR-202ENST00000382099 RESTQ13127 1097 aa17.11■□□□□ 0.33
VLDLR-202ENST00000382099 MTF1Q14872 753 aa17.11■□□□□ 0.33
VLDLR-202ENST00000382099 MSANTD4Q8NCY6 345 aa17.11■□□□□ 0.33
VLDLR-202ENST00000382099 USP28Q96RU2 1077 aa17.11■□□□□ 0.33
VLDLR-202ENST00000382099 KIAA1468Q9P260 1216 aa17.11■□□□□ 0.33
VLDLR-202ENST00000382099 DIP2CQ9Y2E4 1556 aa17.11■□□□□ 0.33
VLDLR-202ENST00000382099 SALL3Q9BXA9 1300 aa17.11■□□□□ 0.33
VLDLR-202ENST00000382099 PDHBP11177 359 aa17.11■□□□□ 0.33
VLDLR-202ENST00000382099 NOA1Q8NC60 698 aaKnown RBP17.11■□□□□ 0.33
VLDLR-202ENST00000382099 MRPL44Q9H9J2 332 aaKnown RBP17.11■□□□□ 0.33
VLDLR-202ENST00000382099 CCDC40Q4G0X9 1142 aa17.1■□□□□ 0.33
VLDLR-202ENST00000382099 FCHSD1Q86WN1 690 aa17.1■□□□□ 0.33
VLDLR-202ENST00000382099 GSPT2Q8IYD1 628 aaKnown RBP17.1■□□□□ 0.33
VLDLR-202ENST00000382099 PPARDQ03181 441 aa17.1■□□□□ 0.33
VLDLR-202ENST00000382099 B4GALNT4Q76KP1 1039 aa17.1■□□□□ 0.33
VLDLR-202ENST00000382099 CPLX3Q8WVH0 158 aa17.1■□□□□ 0.33
VLDLR-202ENST00000382099 BORCS6Q96GS4 357 aa17.1■□□□□ 0.33
VLDLR-202ENST00000382099 CTAGE9A4FU28 777 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms