RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 OPTNQ96CV9 577 aa28.59■■■□□ 2.17
VLDLR-201ENST00000382096 TEPSINQ96N21 525 aa28.59■■■□□ 2.17
VLDLR-201ENST00000382096 TDRD3Q9H7E2 651 aaKnown RBP28.59■■■□□ 2.17
VLDLR-201ENST00000382096 UTYO14607 1347 aa28.59■■■□□ 2.17
VLDLR-201ENST00000382096 HIBADHP31937 336 aaKnown RBP28.58■■■□□ 2.17
VLDLR-201ENST00000382096 GYG1P46976 350 aa28.58■■■□□ 2.17
VLDLR-201ENST00000382096 GCC1Q96CN9 775 aa28.58■■■□□ 2.17
VLDLR-201ENST00000382096 MS4A4AQ96JQ5 239 aa28.58■■■□□ 2.17
VLDLR-201ENST00000382096 FAM84BQ96KN1 310 aaPredicted RBP28.58■■■□□ 2.17
VLDLR-201ENST00000382096 ELP3Q9H9T3 547 aa28.58■■■□□ 2.17
VLDLR-201ENST00000382096 SP3Q02447 781 aa28.57■■■□□ 2.16
VLDLR-201ENST00000382096 DZIP1LQ8IYY4 767 aaKnown RBP28.57■■■□□ 2.16
VLDLR-201ENST00000382096 ARMC5Q96C12 935 aa28.57■■■□□ 2.16
VLDLR-201ENST00000382096 KAZALD1Q96I82 304 aa28.57■■■□□ 2.16
VLDLR-201ENST00000382096 EFCC1Q9HA90 598 aa28.57■■■□□ 2.16
VLDLR-201ENST00000382096 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.56■■■□□ 2.16
VLDLR-201ENST00000382096 CDAN1Q8IWY9 1227 aa28.56■■■□□ 2.16
VLDLR-201ENST00000382096 PTPRCP08575 1304 aa28.55■■■□□ 2.16
VLDLR-201ENST00000382096 CAP1Q01518 475 aa28.55■■■□□ 2.16
VLDLR-201ENST00000382096 SUCLG2Q96I99 432 aa28.55■■■□□ 2.16
VLDLR-201ENST00000382096 MYH13Q9UKX3 1938 aa28.54■■■□□ 2.16
VLDLR-201ENST00000382096 NBPF7P0C2Y1 421 aaPredicted RBP28.54■■■□□ 2.16
VLDLR-201ENST00000382096 CRKP46108 304 aa28.54■■■□□ 2.16
VLDLR-201ENST00000382096 SLFN5Q08AF3 891 aa28.54■■■□□ 2.16
VLDLR-201ENST00000382096 PUS3Q9BZE2 481 aaKnown RBP28.54■■■□□ 2.16
VLDLR-201ENST00000382096 MROH5Q6ZUA9 1318 aa28.53■■■□□ 2.16
VLDLR-201ENST00000382096 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.53■■■□□ 2.16
VLDLR-201ENST00000382096 TMEM39BQ9GZU3 492 aa28.53■■■□□ 2.16
VLDLR-201ENST00000382096 RIPOR2Q9Y4F9 1068 aa28.53■■■□□ 2.16
VLDLR-201ENST00000382096 TCP10L2B9ZVM9 353 aa28.52■■■□□ 2.16
VLDLR-201ENST00000382096 TNNI2P48788 182 aa28.52■■■□□ 2.16
VLDLR-201ENST00000382096 VGLL4Q14135 290 aa28.52■■■□□ 2.16
VLDLR-201ENST00000382096 RABL6Q3YEC7 729 aaPredicted RBP28.52■■■□□ 2.16
VLDLR-201ENST00000382096 BRI3BPQ8WY22 251 aa28.52■■■□□ 2.16
VLDLR-201ENST00000382096 GTF2A2P52657 109 aa28.51■■■□□ 2.15
VLDLR-201ENST00000382096 CNKSR2Q8WXI2 1034 aa28.51■■■□□ 2.15
VLDLR-201ENST00000382096 SSH1Q8WYL5 1049 aa28.51■■■□□ 2.15
VLDLR-201ENST00000382096 MAP3K9P80192 1104 aa28.5■■■□□ 2.15
VLDLR-201ENST00000382096 HDLBPQ00341 1268 aaKnown RBP28.5■■■□□ 2.15
VLDLR-201ENST00000382096 FBXO33Q7Z6M2 555 aa28.5■■■□□ 2.15
VLDLR-201ENST00000382096 ZSWIM8A7E2V4 1837 aa28.5■■■□□ 2.15
VLDLR-201ENST00000382096 CCL15-CCL14A0A0B4J2E2 113 aa28.49■■■□□ 2.15
VLDLR-201ENST00000382096 TAF1CQ15572 869 aaPredicted RBP28.49■■■□□ 2.15
VLDLR-201ENST00000382096 GRIK5Q16478 980 aa28.49■■■□□ 2.15
VLDLR-201ENST00000382096 CCL15Q16663 113 aa28.49■■■□□ 2.15
VLDLR-201ENST00000382096 CSADQ9Y600 493 aa28.49■■■□□ 2.15
VLDLR-201ENST00000382096 TRMT2AQ8IZ69 625 aaKnown RBP28.48■■■□□ 2.15
VLDLR-201ENST00000382096 TBC1D22AQ8WUA7 517 aa28.48■■■□□ 2.15
VLDLR-201ENST00000382096 ZFYVE28Q9HCC9 887 aa28.48■■■□□ 2.15
VLDLR-201ENST00000382096 ARHGEF6Q15052 776 aa28.47■■■□□ 2.15
VLDLR-201ENST00000382096 ALDH1L2Q3SY69 923 aa28.47■■■□□ 2.15
VLDLR-201ENST00000382096 VPS37DQ86XT2 251 aa28.47■■■□□ 2.15
VLDLR-201ENST00000382096 ANKRD44Q8N8A2 993 aa28.47■■■□□ 2.15
VLDLR-201ENST00000382096 OTUD5Q96G74 571 aa28.47■■■□□ 2.15
VLDLR-201ENST00000382096 ZNF333Q96JL9 665 aa28.47■■■□□ 2.15
VLDLR-201ENST00000382096 BICC1Q9H694 974 aaKnown RBP28.47■■■□□ 2.15
VLDLR-201ENST00000382096 SPDYE5A6NIY4 337 aa28.46■■■□□ 2.15
VLDLR-201ENST00000382096 EN2P19622 333 aaPredicted RBP28.46■■■□□ 2.15
VLDLR-201ENST00000382096 FAM43AQ8N2R8 423 aa28.46■■■□□ 2.15
VLDLR-201ENST00000382096 IQSEC3Q9UPP2 1182 aaPredicted RBP28.46■■■□□ 2.15
VLDLR-201ENST00000382096 CAVIN4Q5BKX8 364 aa28.45■■■□□ 2.14
VLDLR-201ENST00000382096 HABP4Q5JVS0 413 aaKnown RBP28.45■■■□□ 2.14
VLDLR-201ENST00000382096 VGLL2Q8N8G2 317 aa28.45■■■□□ 2.14
VLDLR-201ENST00000382096 TEKT1Q969V4 418 aa28.45■■■□□ 2.14
VLDLR-201ENST00000382096 CDCA7LQ96GN5 454 aa28.45■■■□□ 2.14
VLDLR-201ENST00000382096 CHAF1AQ13111 956 aaPredicted RBP28.44■■■□□ 2.14
VLDLR-201ENST00000382096 MRIQ9BWK5 157 aa28.44■■■□□ 2.14
VLDLR-201ENST00000382096 USP44Q9H0E7 712 aa28.44■■■□□ 2.14
VLDLR-201ENST00000382096 SNCAIPQ9Y6H5 919 aa28.44■■■□□ 2.14
VLDLR-201ENST00000382096 CACNB3P54284 484 aa28.43■■■□□ 2.14
VLDLR-201ENST00000382096 LRRC24Q50LG9 513 aa28.43■■■□□ 2.14
VLDLR-201ENST00000382096 METTL24Q5JXM2 366 aa28.43■■■□□ 2.14
VLDLR-201ENST00000382096 ZDHHC15Q96MV8 337 aa28.43■■■□□ 2.14
VLDLR-201ENST00000382096 TMEM106CQ9BVX2 250 aa28.43■■■□□ 2.14
VLDLR-201ENST00000382096 ZCCHC17Q9NP64 241 aaKnown RBP28.43■■■□□ 2.14
VLDLR-201ENST00000382096 PTCH2Q9Y6C5 1203 aa28.43■■■□□ 2.14
VLDLR-201ENST00000382096 RPAP1Q9BWH6 1393 aaPredicted RBP28.42■■■□□ 2.14
VLDLR-201ENST00000382096 FRAT2O75474 233 aaPredicted RBP28.42■■■□□ 2.14
VLDLR-201ENST00000382096 PDE8BO95263 885 aa28.42■■■□□ 2.14
VLDLR-201ENST00000382096 SLC9C1Q4G0N8 1177 aa28.42■■■□□ 2.14
VLDLR-201ENST00000382096 FKBP1CQ5VVH2 108 aa28.42■■■□□ 2.14
VLDLR-201ENST00000382096 FAM83AQ86UY5 434 aa28.42■■■□□ 2.14
VLDLR-201ENST00000382096 CCER2I3L3R5 266 aa28.41■■■□□ 2.14
VLDLR-201ENST00000382096 CETPP11597 493 aa28.41■■■□□ 2.14
VLDLR-201ENST00000382096 NBPF11Q86T75 865 aa28.41■■■□□ 2.14
VLDLR-201ENST00000382096 ERO1BQ86YB8 467 aa28.41■■■□□ 2.14
VLDLR-201ENST00000382096 TMOD2Q9NZR1 351 aa28.41■■■□□ 2.14
VLDLR-201ENST00000382096 MAST3O60307 1309 aa28.41■■■□□ 2.14
VLDLR-201ENST00000382096 KIF16BQ96L93 1317 aa28.41■■■□□ 2.14
VLDLR-201ENST00000382096 TLR2O60603 784 aa28.4■■■□□ 2.14
VLDLR-201ENST00000382096 WDHD1O75717 1129 aaPredicted RBP28.4■■■□□ 2.14
VLDLR-201ENST00000382096 CT47B1P0C2W7 299 aaPredicted RBP28.4■■■□□ 2.14
VLDLR-201ENST00000382096 HOOK2Q96ED9 719 aa28.4■■■□□ 2.14
VLDLR-201ENST00000382096 WRNIP1Q96S55 665 aa28.4■■■□□ 2.14
VLDLR-201ENST00000382096 SUGT1Q9Y2Z0 365 aa28.4■■■□□ 2.14
VLDLR-201ENST00000382096 AK9Q5TCS8 1911 aa28.39■■■□□ 2.14
VLDLR-201ENST00000382096 CEP290O15078 2479 aa28.39■■■□□ 2.14
VLDLR-201ENST00000382096 APOBEC3HQ6NTF7 200 aaKnown RBP28.39■■■□□ 2.14
VLDLR-201ENST00000382096 BCAMP50895 628 aa28.38■■■□□ 2.13
VLDLR-201ENST00000382096 ZKSCAN4Q969J2 545 aaPredicted RBP28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms