RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 DYNC1I1O14576 645 aa14.76□□□□□ -0.05
PUDP-201ENST00000381077 LIFRP42702 1097 aa14.76□□□□□ -0.05
PUDP-201ENST00000381077 RCAN1P53805 252 aa14.76□□□□□ -0.05
PUDP-201ENST00000381077 SNW1Q13573 536 aaKnown RBP14.76□□□□□ -0.05
PUDP-201ENST00000381077 MRPS27Q92552 414 aaKnown RBP14.76□□□□□ -0.05
PUDP-201ENST00000381077 MAP7D2Q96T17 732 aa14.76□□□□□ -0.05
PUDP-201ENST00000381077 UTP14AQ9BVJ6 771 aaKnown RBP14.76□□□□□ -0.05
PUDP-201ENST00000381077 CCDC87Q9NVE4 849 aa14.76□□□□□ -0.05
PUDP-201ENST00000381077 ANO10Q9NW15 660 aa14.76□□□□□ -0.05
PUDP-201ENST00000381077 ORC3Q9UBD5 711 aaPredicted RBP14.76□□□□□ -0.05
PUDP-201ENST00000381077 PHLPP1O60346 1717 aa14.76□□□□□ -0.05
PUDP-201ENST00000381077 STK36Q9NRP7 1315 aa14.76□□□□□ -0.05
PUDP-201ENST00000381077 PATL2C9JE40 543 aaKnown RBP14.75□□□□□ -0.05
PUDP-201ENST00000381077 SH2B2O14492 632 aaPredicted RBP14.75□□□□□ -0.05
PUDP-201ENST00000381077 DTNBO60941 627 aa14.75□□□□□ -0.05
PUDP-201ENST00000381077 CCDC152Q4G0S7 254 aa14.75□□□□□ -0.05
PUDP-201ENST00000381077 MTERF4Q7Z6M4 381 aaKnown RBP14.75□□□□□ -0.05
PUDP-201ENST00000381077 ILDR1Q86SU0 546 aaPredicted RBP14.75□□□□□ -0.05
PUDP-201ENST00000381077 CKAP2LQ8IYA6 745 aa14.75□□□□□ -0.05
PUDP-201ENST00000381077 LINC00301Q8NCQ3 95 aa14.75□□□□□ -0.05
PUDP-201ENST00000381077 R3HCC1Q9Y3T6 440 aaKnown RBP14.75□□□□□ -0.05
PUDP-201ENST00000381077 PNPLA7Q6ZV29 1317 aa14.75□□□□□ -0.05
PUDP-201ENST00000381077 ZNF532Q9HCE3 1301 aa14.75□□□□□ -0.05
PUDP-201ENST00000381077 HAND2P61296 217 aa14.75□□□□□ -0.05
PUDP-201ENST00000381077 KIAA1524Q8TCG1 905 aa14.75□□□□□ -0.05
PUDP-201ENST00000381077 CCDC85AQ96PX6 553 aaPredicted RBP14.75□□□□□ -0.05
PUDP-201ENST00000381077 STRBPQ96SI9 672 aaKnown RBP14.75□□□□□ -0.05
PUDP-201ENST00000381077 NAT10Q9H0A0 1025 aaKnown RBP14.75□□□□□ -0.05
PUDP-201ENST00000381077 PIH1D3Q9NQM4 214 aaKnown RBP14.75□□□□□ -0.05
PUDP-201ENST00000381077 NAP1L2Q9ULW6 460 aaPredicted RBP14.75□□□□□ -0.05
PUDP-201ENST00000381077 AP5Z1O43299 807 aa14.74□□□□□ -0.05
PUDP-201ENST00000381077 DHX8Q14562 1220 aaKnown RBP14.74□□□□□ -0.05
PUDP-201ENST00000381077 MYSM1Q5VVJ2 828 aa14.74□□□□□ -0.05
PUDP-201ENST00000381077 LUZP1Q86V48 1076 aa14.74□□□□□ -0.05
PUDP-201ENST00000381077 SPATA5Q8NB90 893 aa14.74□□□□□ -0.05
PUDP-201ENST00000381077 AIDAQ96BJ3 306 aa14.74□□□□□ -0.05
PUDP-201ENST00000381077 SPATA31A1Q5TZJ5 1347 aa14.74□□□□□ -0.05
PUDP-201ENST00000381077 GOLGA6L19H0YKK7 550 aa14.74□□□□□ -0.05
PUDP-201ENST00000381077 NEMFO60524 1076 aa14.74□□□□□ -0.05
PUDP-201ENST00000381077 IDH1O75874 414 aaKnown RBP14.74□□□□□ -0.05
PUDP-201ENST00000381077 PHKA1P46020 1223 aa14.74□□□□□ -0.05
PUDP-201ENST00000381077 ME1P48163 572 aa14.74□□□□□ -0.05
PUDP-201ENST00000381077 ZNF75DP51815 510 aa14.74□□□□□ -0.05
PUDP-201ENST00000381077 TPRNQ4KMQ1 711 aa14.74□□□□□ -0.05
PUDP-201ENST00000381077 INTS5Q6P9B9 1019 aaKnown RBP14.74□□□□□ -0.05
PUDP-201ENST00000381077 CHST3Q7LGC8 479 aa14.74□□□□□ -0.05
PUDP-201ENST00000381077 FMR1NBQ8N0W7 255 aaPredicted RBP14.74□□□□□ -0.05
PUDP-201ENST00000381077 SYNE4Q8N205 404 aa14.74□□□□□ -0.05
PUDP-201ENST00000381077 SMARCC1Q92922 1105 aaPredicted RBP14.74□□□□□ -0.05
PUDP-201ENST00000381077 MRFAP1L1Q96HT8 127 aa14.74□□□□□ -0.05
PUDP-201ENST00000381077 CDC5LQ99459 802 aaKnown RBP14.74□□□□□ -0.05
PUDP-201ENST00000381077 MPHOSPH8Q99549 860 aa14.74□□□□□ -0.05
PUDP-201ENST00000381077 BPIFA3Q9BQP9 254 aa14.74□□□□□ -0.05
PUDP-201ENST00000381077 KRT23Q9C075 422 aa14.74□□□□□ -0.05
PUDP-201ENST00000381077 METAP2P50579 478 aaKnown RBP eCLIP14.73□□□□□ -0.05
PUDP-201ENST00000381077 IQCB1Q15051 598 aa14.73□□□□□ -0.05
PUDP-201ENST00000381077 CLEC4GQ6UXB4 293 aa14.73□□□□□ -0.05
PUDP-201ENST00000381077 PI16Q6UXB8 463 aa14.73□□□□□ -0.05
PUDP-201ENST00000381077 SYNE3Q6ZMZ3 975 aa14.73□□□□□ -0.05
PUDP-201ENST00000381077 FSIP1Q8NA03 581 aa14.73□□□□□ -0.05
PUDP-201ENST00000381077 NBPF3Q9H094 633 aa14.73□□□□□ -0.05
PUDP-201ENST00000381077 TTC12Q9H892 705 aaPredicted RBP14.73□□□□□ -0.05
PUDP-201ENST00000381077 ZNF652Q9Y2D9 606 aa14.73□□□□□ -0.05
PUDP-201ENST00000381077 SLIT2O94813 1529 aa14.73□□□□□ -0.05
PUDP-201ENST00000381077 CHD4Q14839 1912 aa14.73□□□□□ -0.05
PUDP-201ENST00000381077 BCORQ6W2J9 1755 aa14.73□□□□□ -0.05
PUDP-201ENST00000381077 ZBTB22O15209 634 aa14.72□□□□□ -0.05
PUDP-201ENST00000381077 IGHMBP2P38935 993 aaKnown RBP14.72□□□□□ -0.05
PUDP-201ENST00000381077 PLCB2Q00722 1185 aa14.72□□□□□ -0.05
PUDP-201ENST00000381077 STK38Q15208 465 aa14.72□□□□□ -0.05
PUDP-201ENST00000381077 DDB1Q16531 1140 aa14.72□□□□□ -0.05
PUDP-201ENST00000381077 TMED8Q6PL24 325 aaPredicted RBP14.72□□□□□ -0.05
PUDP-201ENST00000381077 JMYQ8N9B5 988 aa14.72□□□□□ -0.05
PUDP-201ENST00000381077 WASF1Q92558 559 aa14.72□□□□□ -0.05
PUDP-201ENST00000381077 TIGD1Q96MW7 591 aa14.72□□□□□ -0.05
PUDP-201ENST00000381077 NACAP1Q9BZK3 213 aa14.72□□□□□ -0.05
PUDP-201ENST00000381077 PCDHA7Q9UN72 937 aa14.72□□□□□ -0.05
PUDP-201ENST00000381077 SPTLC2O15270 562 aa14.72□□□□□ -0.05
PUDP-201ENST00000381077 PPP6R2O75170 966 aa14.72□□□□□ -0.05
PUDP-201ENST00000381077 CAMTA2O94983 1202 aa14.72□□□□□ -0.05
PUDP-201ENST00000381077 KIF23Q02241 960 aaPredicted RBP14.72□□□□□ -0.05
PUDP-201ENST00000381077 SUSD4Q5VX71 490 aa14.72□□□□□ -0.05
PUDP-201ENST00000381077 APOA5Q6Q788 366 aa14.72□□□□□ -0.05
PUDP-201ENST00000381077 BARGINQ6ZT62 677 aa14.72□□□□□ -0.05
PUDP-201ENST00000381077 CEP57L1Q8IYX8 460 aa14.72□□□□□ -0.05
PUDP-201ENST00000381077 TMTC2Q8N394 836 aa14.72□□□□□ -0.05
PUDP-201ENST00000381077 TRIM5Q9C035 493 aa14.72□□□□□ -0.05
PUDP-201ENST00000381077 DNAJC25Q9H1X3 360 aa14.72□□□□□ -0.05
PUDP-201ENST00000381077 GOLPH3LQ9H4A5 285 aa14.72□□□□□ -0.05
PUDP-201ENST00000381077 GTF2F1P35269 517 aaKnown RBP eCLIP14.71□□□□□ -0.051e-12■■■■■ 33.6
PUDP-201ENST00000381077 PPP2R5BQ15173 497 aa14.71□□□□□ -0.05
PUDP-201ENST00000381077 SF3A1Q15459 793 aaKnown RBP14.71□□□□□ -0.05
PUDP-201ENST00000381077 TBC1D10CQ8IV04 446 aa14.71□□□□□ -0.05
PUDP-201ENST00000381077 MYRIPQ8NFW9 859 aa14.71□□□□□ -0.05
PUDP-201ENST00000381077 IGDCC4Q8TDY8 1250 aa14.71□□□□□ -0.05
PUDP-201ENST00000381077 MYO5AQ9Y4I1 1855 aaKnown RBP14.71□□□□□ -0.05
PUDP-201ENST00000381077 LOC102724428A0A0B4J2F2 783 aa14.71□□□□□ -0.06
PUDP-201ENST00000381077 FAM237AA0A1B0GTK4 181 aa14.71□□□□□ -0.06
PUDP-201ENST00000381077 ZBTB43O43298 467 aa14.71□□□□□ -0.06
PUDP-201ENST00000381077 IGSF3O75054 1194 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms