RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 SYCP1Q15431 976 aa14.07□□□□□ -0.16
GABPB1-203ENST00000380877 NOM1Q5C9Z4 860 aaKnown RBP14.07□□□□□ -0.16
GABPB1-203ENST00000380877 QTRT2Q9H974 415 aaKnown RBP14.07□□□□□ -0.16
GABPB1-203ENST00000380877 TECPR2O15040 1411 aa14.07□□□□□ -0.16
GABPB1-203ENST00000380877 POLD1P28340 1107 aa14.06□□□□□ -0.16
GABPB1-203ENST00000380877 GYG1P46976 350 aa14.06□□□□□ -0.16
GABPB1-203ENST00000380877 KCNQ4P56696 695 aa14.06□□□□□ -0.16
GABPB1-203ENST00000380877 PTPN12Q05209 780 aaKnown RBP14.06□□□□□ -0.16
GABPB1-203ENST00000380877 VEZTQ9HBM0 779 aa14.06□□□□□ -0.16
GABPB1-203ENST00000380877 SAP30BPQ9UHR5 308 aaKnown RBP14.06□□□□□ -0.16
GABPB1-203ENST00000380877 PTPRUQ92729 1446 aa14.06□□□□□ -0.16
GABPB1-203ENST00000380877 PDE6AP16499 860 aa14.06□□□□□ -0.16
GABPB1-203ENST00000380877 DPP8Q6V1X1 898 aaPredicted RBP14.06□□□□□ -0.16
GABPB1-203ENST00000380877 EHMT1Q9H9B1 1298 aa14.06□□□□□ -0.16
GABPB1-203ENST00000380877 IGKV5-2P06315 115 aa14.06□□□□□ -0.16
GABPB1-203ENST00000380877 ADORA1P30542 326 aa14.06□□□□□ -0.16
GABPB1-203ENST00000380877 BCAMP50895 628 aa14.06□□□□□ -0.16
GABPB1-203ENST00000380877 JDP2Q8WYK2 163 aa14.06□□□□□ -0.16
GABPB1-203ENST00000380877 AMPD3Q01432 767 aa14.06□□□□□ -0.16
GABPB1-203ENST00000380877 FAM173BQ6P4H8 233 aa14.06□□□□□ -0.16
GABPB1-203ENST00000380877 FAM200AQ8TCP9 573 aa14.06□□□□□ -0.16
GABPB1-203ENST00000380877 THRAP3Q9Y2W1 955 aaKnown RBP14.06□□□□□ -0.16
GABPB1-203ENST00000380877 CHRNDQ07001 517 aa14.05□□□□□ -0.16
GABPB1-203ENST00000380877 TTLL12Q14166 644 aaPredicted RBP14.05□□□□□ -0.16
GABPB1-203ENST00000380877 XRCC6P12956 609 aaKnown RBP eCLIP14.05□□□□□ -0.16
GABPB1-203ENST00000380877 PHKA1P46020 1223 aa14.05□□□□□ -0.16
GABPB1-203ENST00000380877 SPATA31D1Q6ZQQ2 1576 aa14.05□□□□□ -0.16
GABPB1-203ENST00000380877 ERVV-1B6SEH8 477 aa14.05□□□□□ -0.16
GABPB1-203ENST00000380877 HSPD1P10809 573 aaKnown RBP14.05□□□□□ -0.16
GABPB1-203ENST00000380877 CTDSPL2Q05D32 466 aa14.05□□□□□ -0.16
GABPB1-203ENST00000380877 ANO6Q4KMQ2 910 aa14.05□□□□□ -0.16
GABPB1-203ENST00000380877 ODF2Q5BJF6 829 aa14.05□□□□□ -0.16
GABPB1-203ENST00000380877 UBA5Q9GZZ9 404 aa14.04□□□□□ -0.16
GABPB1-203ENST00000380877 RBM28Q9NW13 759 aaKnown RBP14.04□□□□□ -0.16
GABPB1-203ENST00000380877 SASH1O94885 1247 aa14.04□□□□□ -0.16
GABPB1-203ENST00000380877 ZFYVE27Q5T4F4 411 aa14.04□□□□□ -0.16
GABPB1-203ENST00000380877 TSG101Q99816 390 aa14.04□□□□□ -0.16
GABPB1-203ENST00000380877 C6orf50Q9HD87 102 aa14.04□□□□□ -0.16
GABPB1-203ENST00000380877 H0YIN7 160 aa14.04□□□□□ -0.16
GABPB1-203ENST00000380877 KRT2P35908 639 aa14.04□□□□□ -0.16
GABPB1-203ENST00000380877 RRP36Q96EU6 259 aaKnown RBP14.04□□□□□ -0.16
GABPB1-203ENST00000380877 ATG3Q9NT62 314 aa14.04□□□□□ -0.16
GABPB1-203ENST00000380877 AFMP43652 599 aa14.04□□□□□ -0.16
GABPB1-203ENST00000380877 TRAF1Q13077 416 aa14.04□□□□□ -0.16
GABPB1-203ENST00000380877 ATL3Q6DD88 541 aa14.04□□□□□ -0.16
GABPB1-203ENST00000380877 ME3Q16798 604 aa14.03□□□□□ -0.16
GABPB1-203ENST00000380877 WDR78Q5VTH9 848 aa14.03□□□□□ -0.16
GABPB1-203ENST00000380877 LSG1Q9H089 658 aaKnown RBP14.03□□□□□ -0.16
GABPB1-203ENST00000380877 PATL2C9JE40 543 aaKnown RBP14.03□□□□□ -0.16
GABPB1-203ENST00000380877 H7C1W4 665 aa14.03□□□□□ -0.16
GABPB1-203ENST00000380877 PPP1R12BO60237 982 aaPredicted RBP14.03□□□□□ -0.16
GABPB1-203ENST00000380877 JAK2O60674 1132 aa14.03□□□□□ -0.16
GABPB1-203ENST00000380877 FAM196AQ6ZSG2 479 aa14.03□□□□□ -0.16
GABPB1-203ENST00000380877 MYL10Q9BUA6 226 aa14.03□□□□□ -0.16
GABPB1-203ENST00000380877 PDCL3Q9H2J4 239 aa14.03□□□□□ -0.16
GABPB1-203ENST00000380877 KIF20AO95235 890 aa14.03□□□□□ -0.16
GABPB1-203ENST00000380877 ARHGAP29Q52LW3 1261 aa14.03□□□□□ -0.16
GABPB1-203ENST00000380877 FKBP15Q5T1M5 1219 aa14.03□□□□□ -0.16
GABPB1-203ENST00000380877 AKNAD1Q5T1N1 836 aa14.03□□□□□ -0.16
GABPB1-203ENST00000380877 DEPDC5O75140 1603 aa14.03□□□□□ -0.16
GABPB1-203ENST00000380877 CERS3Q8IU89 383 aa14.03□□□□□ -0.16
GABPB1-203ENST00000380877 RASEFQ8IZ41 740 aa14.03□□□□□ -0.16
GABPB1-203ENST00000380877 MAP4K1Q92918 833 aa14.03□□□□□ -0.16
GABPB1-203ENST00000380877 DNAJC25Q9H1X3 360 aa14.03□□□□□ -0.16
GABPB1-203ENST00000380877 ZSWIM6Q9HCJ5 1215 aa14.03□□□□□ -0.16
GABPB1-203ENST00000380877 DEXIO95424 95 aa14.02□□□□□ -0.16
GABPB1-203ENST00000380877 OTUD7BQ6GQQ9 843 aa14.02□□□□□ -0.16
GABPB1-203ENST00000380877 SEC31BQ9NQW1 1179 aa14.02□□□□□ -0.16
GABPB1-203ENST00000380877 FGFR1OPO95684 399 aaKnown RBP14.02□□□□□ -0.16
GABPB1-203ENST00000380877 PALLDQ8WX93 1383 aa14.02□□□□□ -0.16
GABPB1-203ENST00000380877 TYRO3Q06418 890 aa14.02□□□□□ -0.17
GABPB1-203ENST00000380877 EPHA10Q5JZY3 1008 aa14.02□□□□□ -0.17
GABPB1-203ENST00000380877 TXLNBQ8N3L3 684 aa14.02□□□□□ -0.17
GABPB1-203ENST00000380877 TBC1D22AQ8WUA7 517 aa14.02□□□□□ -0.17
GABPB1-203ENST00000380877 FGAP02671 866 aa14.02□□□□□ -0.17
GABPB1-203ENST00000380877 GNA11P29992 359 aa14.02□□□□□ -0.17
GABPB1-203ENST00000380877 MTX1Q13505 466 aa14.02□□□□□ -0.17
GABPB1-203ENST00000380877 UBE4AQ14139 1066 aa14.02□□□□□ -0.17
GABPB1-203ENST00000380877 DIP2AQ14689 1571 aa14.02□□□□□ -0.17
GABPB1-203ENST00000380877 RBM26Q5T8P6 1007 aaKnown RBP14.02□□□□□ -0.17
GABPB1-203ENST00000380877 TMC6Q7Z403 805 aa14.02□□□□□ -0.17
GABPB1-203ENST00000380877 MAST3O60307 1309 aa14.01□□□□□ -0.17
GABPB1-203ENST00000380877 STAT6P42226 847 aa14.01□□□□□ -0.17
GABPB1-203ENST00000380877 ZNF397Q8NF99 534 aaPredicted RBP14.01□□□□□ -0.17
GABPB1-203ENST00000380877 CRB1P82279 1406 aa14.01□□□□□ -0.17
GABPB1-203ENST00000380877 PARP1P09874 1014 aaKnown RBP14.01□□□□□ -0.17
GABPB1-203ENST00000380877 V9GY48 417 aaPredicted RBP14.01□□□□□ -0.17
GABPB1-203ENST00000380877 BRD1O95696 1058 aa14.01□□□□□ -0.17
GABPB1-203ENST00000380877 ALDH1B1P30837 517 aa14.01□□□□□ -0.17
GABPB1-203ENST00000380877 DHX58Q96C10 678 aa14.01□□□□□ -0.17
GABPB1-203ENST00000380877 USP17L12C9JPN9 530 aa14.01□□□□□ -0.17
GABPB1-203ENST00000380877 USP17L21D6R901 530 aa14.01□□□□□ -0.17
GABPB1-203ENST00000380877 GSDMDP57764 484 aa14.01□□□□□ -0.17
GABPB1-203ENST00000380877 UBE3CQ15386 1083 aa14.01□□□□□ -0.17
GABPB1-203ENST00000380877 ZMYM1Q5SVZ6 1142 aa14.01□□□□□ -0.17
GABPB1-203ENST00000380877 MAPKAPK5Q8IW41 473 aa14.01□□□□□ -0.17
GABPB1-203ENST00000380877 CPLX3Q8WVH0 158 aa14.01□□□□□ -0.17
GABPB1-203ENST00000380877 GTF3C6Q969F1 213 aa14.01□□□□□ -0.17
GABPB1-203ENST00000380877 TRIM37O94972 964 aa14□□□□□ -0.17
GABPB1-203ENST00000380877 TNNI2P48788 182 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms