RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 NOM1Q5C9Z4 860 aaKnown RBP21.58■■□□□ 1.04
HMGN1-204ENST00000380749 DZIP1LQ8IYY4 767 aaKnown RBP21.58■■□□□ 1.04
HMGN1-204ENST00000380749 ZNF296Q8WUU4 475 aaPredicted RBP21.58■■□□□ 1.04
HMGN1-204ENST00000380749 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.58■■□□□ 1.04
HMGN1-204ENST00000380749 TNNI2P48788 182 aa21.57■■□□□ 1.04
HMGN1-204ENST00000380749 WNK4Q96J92 1243 aa21.57■■□□□ 1.04
HMGN1-204ENST00000380749 CLMNQ96JQ2 1002 aa21.57■■□□□ 1.04
HMGN1-204ENST00000380749 CFHR5Q9BXR6 569 aa21.57■■□□□ 1.04
HMGN1-204ENST00000380749 TDRD3Q9H7E2 651 aaKnown RBP21.57■■□□□ 1.04
HMGN1-204ENST00000380749 HTTP42858 3142 aa21.56■■□□□ 1.04
HMGN1-204ENST00000380749 CENPFP49454 3210 aa21.56■■□□□ 1.04
HMGN1-204ENST00000380749 GPR25O00155 361 aa21.56■■□□□ 1.04
HMGN1-204ENST00000380749 UBTFL1P0CB47 393 aaPredicted RBP21.56■■□□□ 1.04
HMGN1-204ENST00000380749 INHBEP58166 350 aa21.56■■□□□ 1.04
HMGN1-204ENST00000380749 ANKRD13AQ8IZ07 590 aa21.56■■□□□ 1.04
HMGN1-204ENST00000380749 TRMT2AQ8IZ69 625 aaKnown RBP21.56■■□□□ 1.04
HMGN1-204ENST00000380749 MAST3O60307 1309 aa21.56■■□□□ 1.04
HMGN1-204ENST00000380749 CCER2I3L3R5 266 aa21.55■■□□□ 1.04
HMGN1-204ENST00000380749 EYA2O00167 538 aa21.55■■□□□ 1.04
HMGN1-204ENST00000380749 SLC5A1P13866 664 aa21.55■■□□□ 1.04
HMGN1-204ENST00000380749 HDLBPQ00341 1268 aaKnown RBP21.55■■□□□ 1.04
HMGN1-204ENST00000380749 PKN2Q16513 984 aaKnown RBP21.55■■□□□ 1.04
HMGN1-204ENST00000380749 TEKT1Q969V4 418 aa21.55■■□□□ 1.04
HMGN1-204ENST00000380749 API5Q9BZZ5 524 aaKnown RBP21.54■■□□□ 1.04
HMGN1-204ENST00000380749 MYH2Q9UKX2 1941 aa21.54■■□□□ 1.04
HMGN1-204ENST00000380749 TCP10L2B9ZVM9 353 aa21.53■■□□□ 1.04
HMGN1-204ENST00000380749 USP2O75604 605 aaPredicted RBP21.53■■□□□ 1.04
HMGN1-204ENST00000380749 FGFR2P21802 821 aa21.53■■□□□ 1.04
HMGN1-204ENST00000380749 RFX5P48382 616 aaPredicted RBP21.53■■□□□ 1.04
HMGN1-204ENST00000380749 BCAMP50895 628 aa21.53■■□□□ 1.04
HMGN1-204ENST00000380749 TMOD2Q9NZR1 351 aa21.53■■□□□ 1.04
HMGN1-204ENST00000380749 HDAC5Q9UQL6 1122 aa21.53■■□□□ 1.04
HMGN1-204ENST00000380749 SUGT1Q9Y2Z0 365 aa21.53■■□□□ 1.04
HMGN1-204ENST00000380749 FKTNO75072 461 aa21.52■■□□□ 1.04
HMGN1-204ENST00000380749 GRIK5Q16478 980 aa21.52■■□□□ 1.04
HMGN1-204ENST00000380749 IFNL1Q8IU54 200 aa21.52■■□□□ 1.04
HMGN1-204ENST00000380749 LPIN2Q92539 896 aa21.52■■□□□ 1.04
HMGN1-204ENST00000380749 FBXO3Q9UK99 471 aa21.52■■□□□ 1.04
HMGN1-204ENST00000380749 KIAA0100Q14667 2235 aaKnown RBP21.52■■□□□ 1.04
HMGN1-204ENST00000380749 TMEM39BQ9GZU3 492 aa21.51■■□□□ 1.03
HMGN1-204ENST00000380749 NOB1Q9ULX3 412 aaKnown RBP21.51■■□□□ 1.03
HMGN1-204ENST00000380749 SOX10P56693 466 aa21.5■■□□□ 1.03
HMGN1-204ENST00000380749 OTUD7BQ6GQQ9 843 aa21.5■■□□□ 1.03
HMGN1-204ENST00000380749 ZDHHC15Q96MV8 337 aa21.5■■□□□ 1.03
HMGN1-204ENST00000380749 TEPSINQ96N21 525 aa21.5■■□□□ 1.03
HMGN1-204ENST00000380749 HPS5Q9UPZ3 1129 aa21.5■■□□□ 1.03
HMGN1-204ENST00000380749 DOCK2Q92608 1830 aa21.5■■□□□ 1.03
HMGN1-204ENST00000380749 CIAO1O76071 339 aa21.49■■□□□ 1.03
HMGN1-204ENST00000380749 WDR66Q8TBY9 1149 aa21.49■■□□□ 1.03
HMGN1-204ENST00000380749 SIL1Q9H173 461 aa21.49■■□□□ 1.03
HMGN1-204ENST00000380749 ELP3Q9H9T3 547 aa21.49■■□□□ 1.03
HMGN1-204ENST00000380749 IGF2BP3O00425 579 aaKnown RBP eCLIP21.48■■□□□ 1.03
HMGN1-204ENST00000380749 ATP2B3Q16720 1220 aa21.48■■□□□ 1.03
HMGN1-204ENST00000380749 ATG9AQ7Z3C6 839 aa21.48■■□□□ 1.03
HMGN1-204ENST00000380749 CDAN1Q8IWY9 1227 aa21.48■■□□□ 1.03
HMGN1-204ENST00000380749 MRIQ9BWK5 157 aa21.48■■□□□ 1.03
HMGN1-204ENST00000380749 CSADQ9Y600 493 aa21.48■■□□□ 1.03
HMGN1-204ENST00000380749 LRRFIP2Q9Y608 721 aaKnown RBP21.48■■□□□ 1.03
HMGN1-204ENST00000380749 RPAP1Q9BWH6 1393 aaPredicted RBP21.48■■□□□ 1.03
HMGN1-204ENST00000380749 GJA5P36382 358 aa21.48■■□□□ 1.03
HMGN1-204ENST00000380749 FBXO46Q6PJ61 603 aaPredicted RBP21.48■■□□□ 1.03
HMGN1-204ENST00000380749 OPTNQ96CV9 577 aa21.48■■□□□ 1.03
HMGN1-204ENST00000380749 HOOK2Q96ED9 719 aa21.48■■□□□ 1.03
HMGN1-204ENST00000380749 R3HDMLQ9H3Y0 253 aa21.48■■□□□ 1.03
HMGN1-204ENST00000380749 CEP126Q9P2H0 1117 aa21.48■■□□□ 1.03
HMGN1-204ENST00000380749 CACNB3P54284 484 aa21.47■■□□□ 1.03
HMGN1-204ENST00000380749 FKBP1CQ5VVH2 108 aa21.47■■□□□ 1.03
HMGN1-204ENST00000380749 HHIPL2Q6UWX4 724 aa21.47■■□□□ 1.03
HMGN1-204ENST00000380749 FAM83AQ86UY5 434 aa21.47■■□□□ 1.03
HMGN1-204ENST00000380749 GNL3LQ9NVN8 582 aaKnown RBP21.47■■□□□ 1.03
HMGN1-204ENST00000380749 RARSP54136 660 aaKnown RBP21.46■■□□□ 1.03
HMGN1-204ENST00000380749 MAP3K9P80192 1104 aa21.46■■□□□ 1.03
HMGN1-204ENST00000380749 VGLL4Q14135 290 aa21.46■■□□□ 1.03
HMGN1-204ENST00000380749 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.46■■□□□ 1.03
HMGN1-204ENST00000380749 RBBP6Q7Z6E9 1792 aaKnown RBP21.45■■□□□ 1.03
HMGN1-204ENST00000380749 IL15P40933 162 aaPredicted RBP21.45■■□□□ 1.02
HMGN1-204ENST00000380749 APOBEC3HQ6NTF7 200 aaKnown RBP21.45■■□□□ 1.02
HMGN1-204ENST00000380749 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.45■■□□□ 1.02
HMGN1-204ENST00000380749 BRCA2P51587 3418 aa21.44■■□□□ 1.02
HMGN1-204ENST00000380749 TESPA1A2RU30 521 aaPredicted RBP21.44■■□□□ 1.02
HMGN1-204ENST00000380749 CRHR2Q13324 411 aa21.44■■□□□ 1.02
HMGN1-204ENST00000380749 MEIS3Q99687 375 aa21.44■■□□□ 1.02
HMGN1-204ENST00000380749 SEMA3EO15041 775 aa21.43■■□□□ 1.02
HMGN1-204ENST00000380749 DCAF15Q66K64 600 aa21.43■■□□□ 1.02
HMGN1-204ENST00000380749 ARHGAP45Q92619 1136 aa21.43■■□□□ 1.02
HMGN1-204ENST00000380749 ERO1AQ96HE7 468 aa21.43■■□□□ 1.02
HMGN1-204ENST00000380749 GTF2A2P52657 109 aa21.42■■□□□ 1.02
HMGN1-204ENST00000380749 OTUD5Q96G74 571 aa21.42■■□□□ 1.02
HMGN1-204ENST00000380749 WRNIP1Q96S55 665 aa21.42■■□□□ 1.02
HMGN1-204ENST00000380749 COPRSQ9NQ92 184 aa21.42■■□□□ 1.02
HMGN1-204ENST00000380749 DENND2AQ9ULE3 1009 aa21.42■■□□□ 1.02
HMGN1-204ENST00000380749 PA2G4Q9UQ80 394 aaKnown RBP21.42■■□□□ 1.02
HMGN1-204ENST00000380749 TRIM17Q9Y577 477 aa21.42■■□□□ 1.02
HMGN1-204ENST00000380749 SALL1Q9NSC2 1324 aa21.41■■□□□ 1.02
HMGN1-204ENST00000380749 MKI67P46013 3256 aaKnown RBP21.41■■□□□ 1.02
HMGN1-204ENST00000380749 CCL15-CCL14A0A0B4J2E2 113 aa21.41■■□□□ 1.02
HMGN1-204ENST00000380749 LDHBP07195 334 aaKnown RBP21.41■■□□□ 1.02
HMGN1-204ENST00000380749 GNAI3P08754 354 aa21.41■■□□□ 1.02
HMGN1-204ENST00000380749 CCL15Q16663 113 aa21.41■■□□□ 1.02
HMGN1-204ENST00000380749 INTS3Q68E01 1043 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms