RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 CRHR2Q13324 411 aa29.07■■■□□ 2.24
U2AF1-202ENST00000380276 LRRC24Q50LG9 513 aa29.07■■■□□ 2.24
U2AF1-202ENST00000380276 CAVIN4Q5BKX8 364 aa29.07■■■□□ 2.24
U2AF1-202ENST00000380276 OTOP1Q7RTM1 612 aa29.07■■■□□ 2.24
U2AF1-202ENST00000380276 CD99L2Q8TCZ2 262 aa29.07■■■□□ 2.24
U2AF1-202ENST00000380276 RIPOR2Q9Y4F9 1068 aa29.07■■■□□ 2.24
U2AF1-202ENST00000380276 CDAN1Q8IWY9 1227 aa29.06■■■□□ 2.24
U2AF1-202ENST00000380276 TMEM39BQ9GZU3 492 aa29.06■■■□□ 2.24
U2AF1-202ENST00000380276 PDE4DIPQ5VU43 2346 aa29.06■■■□□ 2.24
U2AF1-202ENST00000380276 LAMB1P07942 1786 aa29.06■■■□□ 2.24
U2AF1-202ENST00000380276 ZEB1P37275 1124 aaPredicted RBP29.04■■■□□ 2.24
U2AF1-202ENST00000380276 GRIK5Q16478 980 aa29.04■■■□□ 2.24
U2AF1-202ENST00000380276 UTYO14607 1347 aa29.03■■■□□ 2.24
U2AF1-202ENST00000380276 MRPL50Q8N5N7 158 aaKnown RBP29.03■■■□□ 2.24
U2AF1-202ENST00000380276 TBC1D22AQ8WUA7 517 aa29.03■■■□□ 2.24
U2AF1-202ENST00000380276 CSADQ9Y600 493 aa29.03■■■□□ 2.24
U2AF1-202ENST00000380276 CACNB3P54284 484 aa29.02■■■□□ 2.24
U2AF1-202ENST00000380276 RABL6Q3YEC7 729 aaPredicted RBP29.02■■■□□ 2.24
U2AF1-202ENST00000380276 FBXO33Q7Z6M2 555 aa29.02■■■□□ 2.24
U2AF1-202ENST00000380276 ANKRD44Q8N8A2 993 aa29.02■■■□□ 2.24
U2AF1-202ENST00000380276 KLHDC4Q8TBB5 520 aa29.02■■■□□ 2.24
U2AF1-202ENST00000380276 CNKSR2Q8WXI2 1034 aa29.02■■■□□ 2.24
U2AF1-202ENST00000380276 TEKT1Q969V4 418 aa29.02■■■□□ 2.24
U2AF1-202ENST00000380276 TEPSINQ96N21 525 aa29.02■■■□□ 2.24
U2AF1-202ENST00000380276 PTPN18Q99952 460 aa29.02■■■□□ 2.24
U2AF1-202ENST00000380276 TMOD2Q9NZR1 351 aa29.02■■■□□ 2.24
U2AF1-202ENST00000380276 MAP3K9P80192 1104 aa29.01■■■□□ 2.23
U2AF1-202ENST00000380276 SP3Q02447 781 aa29.01■■■□□ 2.23
U2AF1-202ENST00000380276 VGLL4Q14135 290 aa29.01■■■□□ 2.23
U2AF1-202ENST00000380276 EFCC1Q9HA90 598 aa29.01■■■□□ 2.23
U2AF1-202ENST00000380276 PDE8BO95263 885 aa29■■■□□ 2.23
U2AF1-202ENST00000380276 PPP1R3FQ6ZSY5 799 aaPredicted RBP29■■■□□ 2.23
U2AF1-202ENST00000380276 OTUD5Q96G74 571 aa29■■■□□ 2.23
U2AF1-202ENST00000380276 PTPN22Q9Y2R2 807 aa29■■■□□ 2.23
U2AF1-202ENST00000380276 PTPRCP08575 1304 aa28.99■■■□□ 2.23
U2AF1-202ENST00000380276 CCL15-CCL14A0A0B4J2E2 113 aa28.99■■■□□ 2.23
U2AF1-202ENST00000380276 TESPA1A2RU30 521 aaPredicted RBP28.99■■■□□ 2.23
U2AF1-202ENST00000380276 BCAMP50895 628 aa28.99■■■□□ 2.23
U2AF1-202ENST00000380276 TAF1CQ15572 869 aaPredicted RBP28.99■■■□□ 2.23
U2AF1-202ENST00000380276 CCL15Q16663 113 aa28.99■■■□□ 2.23
U2AF1-202ENST00000380276 INTS3Q68E01 1043 aaKnown RBP28.98■■■□□ 2.23
U2AF1-202ENST00000380276 IFIT1P09914 478 aaKnown RBP28.97■■■□□ 2.23
U2AF1-202ENST00000380276 GTF2A2P52657 109 aa28.97■■■□□ 2.23
U2AF1-202ENST00000380276 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.97■■■□□ 2.23
U2AF1-202ENST00000380276 BRI3BPQ8WY22 251 aa28.97■■■□□ 2.23
U2AF1-202ENST00000380276 ZFYVE28Q9HCC9 887 aa28.97■■■□□ 2.23
U2AF1-202ENST00000380276 HDLBPQ00341 1268 aaKnown RBP28.96■■■□□ 2.23
U2AF1-202ENST00000380276 VGLL2Q8N8G2 317 aa28.96■■■□□ 2.23
U2AF1-202ENST00000380276 MS4A4AQ96JQ5 239 aa28.96■■■□□ 2.23
U2AF1-202ENST00000380276 MAST3O60307 1309 aa28.95■■■□□ 2.23
U2AF1-202ENST00000380276 ZNF521Q96K83 1311 aa28.95■■■□□ 2.23
U2AF1-202ENST00000380276 POTEFA5A3E0 1075 aa28.95■■■□□ 2.22
U2AF1-202ENST00000380276 PUM3Q15397 648 aaKnown RBP28.95■■■□□ 2.22
U2AF1-202ENST00000380276 SSH1Q8WYL5 1049 aa28.94■■■□□ 2.22
U2AF1-202ENST00000380276 WRNIP1Q96S55 665 aa28.94■■■□□ 2.22
U2AF1-202ENST00000380276 WDHD1O75717 1129 aaPredicted RBP28.93■■■□□ 2.22
U2AF1-202ENST00000380276 ZDHHC15Q96MV8 337 aa28.93■■■□□ 2.22
U2AF1-202ENST00000380276 E9PSI1 815 aa28.92■■■□□ 2.22
U2AF1-202ENST00000380276 SLC5A1P13866 664 aa28.92■■■□□ 2.22
U2AF1-202ENST00000380276 ARHGEF6Q15052 776 aa28.92■■■□□ 2.22
U2AF1-202ENST00000380276 FAM43AQ8N2R8 423 aa28.92■■■□□ 2.22
U2AF1-202ENST00000380276 HOOK2Q96ED9 719 aa28.92■■■□□ 2.22
U2AF1-202ENST00000380276 USP44Q9H0E7 712 aa28.92■■■□□ 2.22
U2AF1-202ENST00000380276 ZKSCAN4Q969J2 545 aaPredicted RBP28.91■■■□□ 2.22
U2AF1-202ENST00000380276 SPDYE5A6NIY4 337 aa28.9■■■□□ 2.22
U2AF1-202ENST00000380276 SNCAIPQ9Y6H5 919 aa28.9■■■□□ 2.22
U2AF1-202ENST00000380276 MYH13Q9UKX3 1938 aa28.9■■■□□ 2.22
U2AF1-202ENST00000380276 EYA2O00167 538 aa28.89■■■□□ 2.22
U2AF1-202ENST00000380276 CAP1Q01518 475 aa28.89■■■□□ 2.22
U2AF1-202ENST00000380276 DCAF15Q66K64 600 aa28.89■■■□□ 2.22
U2AF1-202ENST00000380276 FAM83AQ86UY5 434 aa28.89■■■□□ 2.22
U2AF1-202ENST00000380276 SUGT1Q9Y2Z0 365 aa28.89■■■□□ 2.22
U2AF1-202ENST00000380276 CETPP11597 493 aa28.88■■■□□ 2.21
U2AF1-202ENST00000380276 FGFR2P21802 821 aa28.88■■■□□ 2.21
U2AF1-202ENST00000380276 APOBEC3HQ6NTF7 200 aaKnown RBP28.88■■■□□ 2.21
U2AF1-202ENST00000380276 ERO1BQ86YB8 467 aa28.88■■■□□ 2.21
U2AF1-202ENST00000380276 LPIN2Q92539 896 aa28.88■■■□□ 2.21
U2AF1-202ENST00000380276 TMEM106CQ9BVX2 250 aa28.88■■■□□ 2.21
U2AF1-202ENST00000380276 SMC4Q9NTJ3 1288 aa28.88■■■□□ 2.21
U2AF1-202ENST00000380276 PCDH10Q9P2E7 1040 aa28.88■■■□□ 2.21
U2AF1-202ENST00000380276 KIF16BQ96L93 1317 aa28.88■■■□□ 2.21
U2AF1-202ENST00000380276 MIGA2Q7L4E1 593 aa28.87■■■□□ 2.21
U2AF1-202ENST00000380276 WDR66Q8TBY9 1149 aa28.87■■■□□ 2.21
U2AF1-202ENST00000380276 ARMC5Q96C12 935 aa28.87■■■□□ 2.21
U2AF1-202ENST00000380276 MRIQ9BWK5 157 aa28.87■■■□□ 2.21
U2AF1-202ENST00000380276 SIL1Q9H173 461 aa28.87■■■□□ 2.21
U2AF1-202ENST00000380276 ECM2O94769 699 aaPredicted RBP28.86■■■□□ 2.21
U2AF1-202ENST00000380276 EN2P19622 333 aaPredicted RBP28.86■■■□□ 2.21
U2AF1-202ENST00000380276 SNAPC2Q13487 334 aa28.86■■■□□ 2.21
U2AF1-202ENST00000380276 SLC9C1Q4G0N8 1177 aa28.86■■■□□ 2.21
U2AF1-202ENST00000380276 HHIPL2Q6UWX4 724 aa28.86■■■□□ 2.21
U2AF1-202ENST00000380276 ZNF341Q9BYN7 854 aa28.86■■■□□ 2.21
U2AF1-202ENST00000380276 PTCH2Q9Y6C5 1203 aa28.86■■■□□ 2.21
U2AF1-202ENST00000380276 MYCP01106 439 aaPredicted RBP28.85■■■□□ 2.21
U2AF1-202ENST00000380276 RFX5P48382 616 aaPredicted RBP28.85■■■□□ 2.21
U2AF1-202ENST00000380276 TCP10Q12799 353 aa28.85■■■□□ 2.21
U2AF1-202ENST00000380276 KIF22Q14807 665 aa28.85■■■□□ 2.21
U2AF1-202ENST00000380276 FKBP1CQ5VVH2 108 aa28.85■■■□□ 2.21
U2AF1-202ENST00000380276 RBBP6Q7Z6E9 1792 aaKnown RBP28.84■■■□□ 2.21
U2AF1-202ENST00000380276 BTBD19C9JJ37 291 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms