RNA–Protein interactions for RNA: ENST00000380151.3

CDKN2A-203, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best)

Gene CDKN2A, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-203ENST00000380151 TDRD3Q9H7E2 651 aaKnown RBP29.64■■■□□ 2.34
CDKN2A-203ENST00000380151 COPRSQ9NQ92 184 aa29.64■■■□□ 2.34
CDKN2A-203ENST00000380151 ZNF70Q9UC06 446 aaPredicted RBP29.64■■■□□ 2.34
CDKN2A-203ENST00000380151 RASA3Q14644 834 aa29.63■■■□□ 2.33
CDKN2A-203ENST00000380151 SAGE1Q9NXZ1 904 aa29.63■■■□□ 2.33
CDKN2A-203ENST00000380151 SRGAP3O43295 1099 aa29.62■■■□□ 2.33
CDKN2A-203ENST00000380151 MKRN3Q13064 507 aaKnown RBP29.62■■■□□ 2.33
CDKN2A-203ENST00000380151 RNF186Q9NXI6 227 aa29.62■■■□□ 2.33
CDKN2A-203ENST00000380151 TRPA1O75762 1119 aa29.61■■■□□ 2.33
CDKN2A-203ENST00000380151 NBPF12Q5TAG4 269 aaPredicted RBP29.61■■■□□ 2.33
CDKN2A-203ENST00000380151 ZKSCAN2Q63HK3 967 aa29.61■■■□□ 2.33
CDKN2A-203ENST00000380151 MYH13Q9UKX3 1938 aa29.61■■■□□ 2.33
CDKN2A-203ENST00000380151 TNFAIP1Q13829 316 aa29.6■■■□□ 2.33
CDKN2A-203ENST00000380151 LDLRAD1Q5T700 205 aa29.6■■■□□ 2.33
CDKN2A-203ENST00000380151 TEKT1Q969V4 418 aa29.6■■■□□ 2.33
CDKN2A-203ENST00000380151 ZBED9Q6R2W3 1325 aa29.6■■■□□ 2.33
CDKN2A-203ENST00000380151 CASP8AP2Q9UKL3 1982 aa29.59■■■□□ 2.33
CDKN2A-203ENST00000380151 MTX1Q13505 466 aa29.59■■■□□ 2.33
CDKN2A-203ENST00000380151 SUPT20HL1Q3ZLR7 823 aa29.59■■■□□ 2.33
CDKN2A-203ENST00000380151 TMEM57Q8N5G2 664 aa29.59■■■□□ 2.33
CDKN2A-203ENST00000380151 AKAP11Q9UKA4 1901 aa29.59■■■□□ 2.33
CDKN2A-203ENST00000380151 PPP1R12BO60237 982 aaPredicted RBP29.58■■■□□ 2.33
CDKN2A-203ENST00000380151 HDLBPQ00341 1268 aaKnown RBP29.58■■■□□ 2.33
CDKN2A-203ENST00000380151 REM2Q8IYK8 340 aaPredicted RBP29.58■■■□□ 2.33
CDKN2A-203ENST00000380151 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.58■■■□□ 2.33
CDKN2A-203ENST00000380151 MAST3O60307 1309 aa29.57■■■□□ 2.32
CDKN2A-203ENST00000380151 TCP10L2B9ZVM9 353 aa29.57■■■□□ 2.32
CDKN2A-203ENST00000380151 GNAI2P04899 355 aa29.57■■■□□ 2.32
CDKN2A-203ENST00000380151 MAP3K11Q16584 847 aa29.57■■■□□ 2.32
CDKN2A-203ENST00000380151 SUGT1Q9Y2Z0 365 aa29.57■■■□□ 2.32
CDKN2A-203ENST00000380151 ADORA1P30542 326 aa29.56■■■□□ 2.32
CDKN2A-203ENST00000380151 PHKA1P46020 1223 aa29.56■■■□□ 2.32
CDKN2A-203ENST00000380151 CDAN1Q8IWY9 1227 aa29.56■■■□□ 2.32
CDKN2A-203ENST00000380151 WDR66Q8TBY9 1149 aa29.56■■■□□ 2.32
CDKN2A-203ENST00000380151 CACNB3P54284 484 aa29.55■■■□□ 2.32
CDKN2A-203ENST00000380151 ABHD8Q96I13 439 aa29.55■■■□□ 2.32
CDKN2A-203ENST00000380151 CLMNQ96JQ2 1002 aa29.55■■■□□ 2.32
CDKN2A-203ENST00000380151 ZDHHC15Q96MV8 337 aa29.55■■■□□ 2.32
CDKN2A-203ENST00000380151 GNL3LQ9NVN8 582 aaKnown RBP29.55■■■□□ 2.32
CDKN2A-203ENST00000380151 TMEM39BQ9GZU3 492 aa29.54■■■□□ 2.32
CDKN2A-203ENST00000380151 TFCP2Q12800 502 aa29.53■■■□□ 2.32
CDKN2A-203ENST00000380151 SPRYD7Q5W111 196 aa29.53■■■□□ 2.32
CDKN2A-203ENST00000380151 TEPSINQ96N21 525 aa29.53■■■□□ 2.32
CDKN2A-203ENST00000380151 PNMA6EA0A0J9YXQ4 647 aa29.52■■■□□ 2.32
CDKN2A-203ENST00000380151 IREB2P48200 963 aaKnown RBP29.52■■■□□ 2.32
CDKN2A-203ENST00000380151 TNNI2P48788 182 aa29.52■■■□□ 2.32
CDKN2A-203ENST00000380151 APOBEC3HQ6NTF7 200 aaKnown RBP29.52■■■□□ 2.32
CDKN2A-203ENST00000380151 FTSJ3Q8IY81 847 aaKnown RBP29.52■■■□□ 2.32
CDKN2A-203ENST00000380151 SLC10A4Q96EP9 437 aa29.52■■■□□ 2.32
CDKN2A-203ENST00000380151 MRIQ9BWK5 157 aa29.52■■■□□ 2.32
CDKN2A-203ENST00000380151 USP2O75604 605 aaPredicted RBP29.51■■■□□ 2.31
CDKN2A-203ENST00000380151 PRDX5P30044 214 aa29.51■■■□□ 2.31
CDKN2A-203ENST00000380151 CCDC102BQ68D86 513 aa29.51■■■□□ 2.31
CDKN2A-203ENST00000380151 TMOD2Q9NZR1 351 aa29.51■■■□□ 2.31
CDKN2A-203ENST00000380151 TIMM10P62072 90 aa29.5■■■□□ 2.31
CDKN2A-203ENST00000380151 HHIPL2Q6UWX4 724 aa29.5■■■□□ 2.31
CDKN2A-203ENST00000380151 MCOLN1Q9GZU1 580 aa29.5■■■□□ 2.31
CDKN2A-203ENST00000380151 DENND2AQ9ULE3 1009 aa29.5■■■□□ 2.31
CDKN2A-203ENST00000380151 OTOFQ9HC10 1997 aa29.5■■■□□ 2.31
CDKN2A-203ENST00000380151 A0A1B0GUL7 405 aa29.49■■■□□ 2.31
CDKN2A-203ENST00000380151 SEMA3EO15041 775 aa29.49■■■□□ 2.31
CDKN2A-203ENST00000380151 TM4SF4P48230 202 aa29.49■■■□□ 2.31
CDKN2A-203ENST00000380151 SREBF2Q12772 1141 aa29.49■■■□□ 2.31
CDKN2A-203ENST00000380151 DIXDC1Q155Q3 683 aa29.49■■■□□ 2.31
CDKN2A-203ENST00000380151 WNK4Q96J92 1243 aa29.49■■■□□ 2.31
CDKN2A-203ENST00000380151 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.49■■■□□ 2.31
CDKN2A-203ENST00000380151 RLBP1P12271 317 aa29.48■■■□□ 2.31
CDKN2A-203ENST00000380151 DGKZQ13574 1117 aa29.48■■■□□ 2.31
CDKN2A-203ENST00000380151 ITPRIPQ8IWB1 547 aa29.48■■■□□ 2.31
CDKN2A-203ENST00000380151 AKAP2Q9Y2D5 859 aa29.48■■■□□ 2.31
CDKN2A-203ENST00000380151 DAGLAQ9Y4D2 1042 aa29.48■■■□□ 2.31
CDKN2A-203ENST00000380151 SALL1Q9NSC2 1324 aa29.47■■■□□ 2.31
CDKN2A-203ENST00000380151 LDHBP07195 334 aaKnown RBP29.47■■■□□ 2.31
CDKN2A-203ENST00000380151 RASGRF1Q13972 1273 aa29.47■■■□□ 2.31
CDKN2A-203ENST00000380151 ANKRD13AQ8IZ07 590 aa29.47■■■□□ 2.31
CDKN2A-203ENST00000380151 XAGE2Q96GT9 111 aa29.47■■■□□ 2.31
CDKN2A-203ENST00000380151 C1orf115Q9H7X2 142 aa29.47■■■□□ 2.31
CDKN2A-203ENST00000380151 UNCXA6NJT0 531 aa29.46■■■□□ 2.31
CDKN2A-203ENST00000380151 TBC1D8O95759 1140 aa29.45■■■□□ 2.31
CDKN2A-203ENST00000380151 ZBTB48P10074 688 aaPredicted RBP29.45■■■□□ 2.31
CDKN2A-203ENST00000380151 MANSC4A6NHS7 340 aaPredicted RBP29.44■■■□□ 2.3
CDKN2A-203ENST00000380151 GJA5P36382 358 aa29.44■■■□□ 2.3
CDKN2A-203ENST00000380151 G3BP1Q13283 466 aaKnown RBP eCLIP29.44■■■□□ 2.3
CDKN2A-203ENST00000380151 MVPQ14764 893 aaKnown RBP29.44■■■□□ 2.3
CDKN2A-203ENST00000380151 FKBP1CQ5VVH2 108 aa29.44■■■□□ 2.3
CDKN2A-203ENST00000380151 NEUROD6Q96NK8 337 aa29.44■■■□□ 2.3
CDKN2A-203ENST00000380151 ELP3Q9H9T3 547 aa29.44■■■□□ 2.3
CDKN2A-203ENST00000380151 FAM83AQ86UY5 434 aa29.43■■■□□ 2.3
CDKN2A-203ENST00000380151 ZBTB22O15209 634 aa29.42■■■□□ 2.3
CDKN2A-203ENST00000380151 ZGPATQ8N5A5 531 aaKnown RBP29.42■■■□□ 2.3
CDKN2A-203ENST00000380151 RPAP1Q9BWH6 1393 aaPredicted RBP29.41■■■□□ 2.3
CDKN2A-203ENST00000380151 POLA2Q14181 598 aa29.41■■■□□ 2.3
CDKN2A-203ENST00000380151 CDC42EP5Q6NZY7 148 aa29.41■■■□□ 2.3
CDKN2A-203ENST00000380151 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.41■■■□□ 2.3
CDKN2A-203ENST00000380151 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.41■■■□□ 2.3
CDKN2A-203ENST00000380151 PDS5AQ29RF7 1337 aaKnown RBP29.41■■■□□ 2.3
CDKN2A-203ENST00000380151 CCDC85CA6NKD9 419 aa29.4■■■□□ 2.3
CDKN2A-203ENST00000380151 VGLL4Q14135 290 aa29.4■■■□□ 2.3
CDKN2A-203ENST00000380151 OPTNQ96CV9 577 aa29.4■■■□□ 2.3
CDKN2A-203ENST00000380151 ABCF2Q9UG63 623 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms