RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 NAA16Q6N069 864 aaPredicted RBP8.34□□□□□ -1.07
TRIM6-202ENST00000380097 KCNB2Q92953 911 aa8.34□□□□□ -1.07
TRIM6-202ENST00000380097 FAM212AQ96EL1 285 aa8.34□□□□□ -1.07
TRIM6-202ENST00000380097 PLCD4Q9BRC7 762 aa8.34□□□□□ -1.07
TRIM6-202ENST00000380097 DESI2Q9BSY9 194 aa8.34□□□□□ -1.07
TRIM6-202ENST00000380097 CDK12Q9NYV4 1490 aaPredicted RBP8.34□□□□□ -1.07
TRIM6-202ENST00000380097 NPHP4O75161 1426 aaPredicted RBP8.34□□□□□ -1.07
TRIM6-202ENST00000380097 TMEM94Q12767 1356 aa8.34□□□□□ -1.07
TRIM6-202ENST00000380097 ZNF142P52746 1687 aaPredicted RBP8.34□□□□□ -1.07
TRIM6-202ENST00000380097 SHTN1A0MZ66 631 aa8.34□□□□□ -1.07
TRIM6-202ENST00000380097 CTAGE15A4D2H0 777 aa8.34□□□□□ -1.07
TRIM6-202ENST00000380097 CTAGE8P0CG41 777 aa8.34□□□□□ -1.07
TRIM6-202ENST00000380097 CCT2P78371 535 aaKnown RBP8.34□□□□□ -1.07
TRIM6-202ENST00000380097 SATB1Q01826 763 aa8.34□□□□□ -1.07
TRIM6-202ENST00000380097 MTX1Q13505 466 aa8.34□□□□□ -1.07
TRIM6-202ENST00000380097 CTAGE6Q86UF2 777 aa8.34□□□□□ -1.07
TRIM6-202ENST00000380097 EGFL6Q8IUX8 553 aa8.34□□□□□ -1.07
TRIM6-202ENST00000380097 CTAGE4Q8IX94 777 aa8.34□□□□□ -1.07
TRIM6-202ENST00000380097 FMR1NBQ8N0W7 255 aaPredicted RBP8.34□□□□□ -1.07
TRIM6-202ENST00000380097 BOLA2Q9H3K6 86 aa8.34□□□□□ -1.07
TRIM6-202ENST00000380097 CUTAO60888 179 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 RNF40O75150 1001 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 TUBBP07437 444 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 CALRP27797 417 aaKnown RBP8.33□□□□□ -1.08
TRIM6-202ENST00000380097 AKAP17AQ02040 695 aaKnown RBP8.33□□□□□ -1.08
TRIM6-202ENST00000380097 STRN4Q9NRL3 753 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 NLRP2Q9NX02 1062 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 L1RE1Q9UN81 338 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 SETD1AO15047 1707 aaKnown RBP8.33□□□□□ -1.08
TRIM6-202ENST00000380097 MAP3K5Q99683 1374 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 SETD1BQ9UPS6 1966 aaKnown RBP8.33□□□□□ -1.08
TRIM6-202ENST00000380097 PTPDC1A2A3K4 754 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 IKBKBO14920 756 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 FANCGO15287 622 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 STX10O60499 249 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 KIAA0754O94854 1291 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 ZNF202O95125 648 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 POLR3DP05423 398 aaPredicted RBP8.33□□□□□ -1.08
TRIM6-202ENST00000380097 INPP5BP32019 993 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 CCT5P48643 541 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 ADKP55263 362 aaKnown RBP8.33□□□□□ -1.08
TRIM6-202ENST00000380097 HDGFL1Q5TGJ6 251 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 VSTM4Q8IW00 320 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 KCNG4Q8TDN1 519 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 CRACR2AQ9BSW2 395 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 C19orf44Q9H6X5 657 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 CDC23Q9UJX2 597 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 C3P01024 1663 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 CTAGE9A4FU28 777 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 NUTM2BA6NNL0 878 aaPredicted RBP8.33□□□□□ -1.08
TRIM6-202ENST00000380097 NUTM2EB1AL46 878 aaPredicted RBP8.33□□□□□ -1.08
TRIM6-202ENST00000380097 COL9A3Q14050 684 aaPredicted RBP8.33□□□□□ -1.08
TRIM6-202ENST00000380097 MTHFSDQ2M296 383 aaKnown RBP8.33□□□□□ -1.08
TRIM6-202ENST00000380097 ZNF569Q5MCW4 686 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 TOGARAM2Q6ZUX3 1019 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 NUTM2AQ8IVF1 878 aaPredicted RBP8.33□□□□□ -1.08
TRIM6-202ENST00000380097 CTCFLQ8NI51 663 aaPredicted RBP8.33□□□□□ -1.08
TRIM6-202ENST00000380097 DPF2Q92785 391 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 C9orf78Q9NZ63 289 aaPredicted RBP8.33□□□□□ -1.08
TRIM6-202ENST00000380097 ADCY9O60503 1353 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 USP54Q70EL1 1684 aa8.33□□□□□ -1.08
TRIM6-202ENST00000380097 CPP00450 1065 aa8.32□□□□□ -1.08
TRIM6-202ENST00000380097 HNRNPH1P31943 449 aaKnown RBP8.32□□□□□ -1.08
TRIM6-202ENST00000380097 MAP9Q49MG5 647 aa8.32□□□□□ -1.08
TRIM6-202ENST00000380097 RPAINQ86UA6 219 aa8.32□□□□□ -1.08
TRIM6-202ENST00000380097 POTEDQ86YR6 584 aa8.32□□□□□ -1.08
TRIM6-202ENST00000380097 EYA1Q99502 592 aa8.32□□□□□ -1.08
TRIM6-202ENST00000380097 JPH2Q9BR39 696 aaPredicted RBP8.32□□□□□ -1.08
TRIM6-202ENST00000380097 CCDC8Q9H0W5 538 aaPredicted RBP8.32□□□□□ -1.08
TRIM6-202ENST00000380097 RAI14Q9P0K7 980 aa8.32□□□□□ -1.08
TRIM6-202ENST00000380097 TMEM232C9JQI7 657 aa8.32□□□□□ -1.08
TRIM6-202ENST00000380097 SPTLC2O15270 562 aa8.32□□□□□ -1.08
TRIM6-202ENST00000380097 NBPF7P0C2Y1 421 aaPredicted RBP8.32□□□□□ -1.08
TRIM6-202ENST00000380097 GSCP56915 257 aaPredicted RBP8.32□□□□□ -1.08
TRIM6-202ENST00000380097 SCRN1Q12765 414 aa8.32□□□□□ -1.08
TRIM6-202ENST00000380097 AIMP1Q12904 312 aaKnown RBP8.32□□□□□ -1.08
TRIM6-202ENST00000380097 G3BP1Q13283 466 aaKnown RBP eCLIP8.32□□□□□ -1.08
TRIM6-202ENST00000380097 POLA2Q14181 598 aa8.32□□□□□ -1.08
TRIM6-202ENST00000380097 FBXW10Q5XX13 1052 aa8.32□□□□□ -1.08
TRIM6-202ENST00000380097 MPRIPQ6WCQ1 1025 aa8.32□□□□□ -1.08
TRIM6-202ENST00000380097 CCDC148Q8NFR7 591 aa8.32□□□□□ -1.08
TRIM6-202ENST00000380097 PNKPQ96T60 521 aa8.32□□□□□ -1.08
TRIM6-202ENST00000380097 LLPHQ9BRT6 129 aaKnown RBP8.32□□□□□ -1.08
TRIM6-202ENST00000380097 IRX2Q9BZI1 471 aaPredicted RBP8.32□□□□□ -1.08
TRIM6-202ENST00000380097 RABEP2Q9H5N1 569 aa8.32□□□□□ -1.08
TRIM6-202ENST00000380097 A0A0D9SFI3 127 aa8.32□□□□□ -1.08
TRIM6-202ENST00000380097 A0A1W2PQ27 194 aa8.32□□□□□ -1.08
TRIM6-202ENST00000380097 A0A1W2PQ64 194 aa8.32□□□□□ -1.08
TRIM6-202ENST00000380097 A0A1W2PQD8 194 aa8.32□□□□□ -1.08
TRIM6-202ENST00000380097 PLEKHG3A1L390 1219 aa8.32□□□□□ -1.08
TRIM6-202ENST00000380097 ADD1P35611 737 aaKnown RBP8.32□□□□□ -1.08
TRIM6-202ENST00000380097 TAF7Q15545 349 aaPredicted RBP8.32□□□□□ -1.08
TRIM6-202ENST00000380097 TSGA10IPQ3SY00 556 aa8.32□□□□□ -1.08
TRIM6-202ENST00000380097 GRIPAP1Q4V328 841 aa8.32□□□□□ -1.08
TRIM6-202ENST00000380097 ANKZF1Q9H8Y5 726 aa8.32□□□□□ -1.08
TRIM6-202ENST00000380097 TAF6LQ9Y6J9 622 aa8.32□□□□□ -1.08
TRIM6-202ENST00000380097 FAM169AQ9Y6X4 670 aa8.32□□□□□ -1.08
TRIM6-202ENST00000380097 CD163L1Q9NR16 1453 aa8.31□□□□□ -1.08
TRIM6-202ENST00000380097 CDC42BPGQ6DT37 1551 aa8.31□□□□□ -1.08
TRIM6-202ENST00000380097 IBSPP21815 317 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms