RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 MCM10Q7L590 875 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 IL17REQ8NFR9 667 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 DNAJC25Q9H1X3 360 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 KIF9Q9HAQ2 790 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 PARP3Q9Y6F1 533 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 COL22A1Q8NFW1 1626 aaPredicted RBP8.6□□□□□ -1.03
CDKL5-201ENST00000379989 SOS2Q07890 1332 aaPredicted RBP8.6□□□□□ -1.03
CDKL5-201ENST00000379989 CCDC151A5D8V7 595 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 URI1O94763 535 aaPredicted RBP8.6□□□□□ -1.03
CDKL5-201ENST00000379989 TUBB4AP04350 444 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 RDXP35241 583 aaKnown RBP8.6□□□□□ -1.03
CDKL5-201ENST00000379989 ATP2B2Q01814 1243 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 DNM1Q05193 864 aaKnown RBP8.6□□□□□ -1.03
CDKL5-201ENST00000379989 VPS53Q5VIR6 699 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 IQCA1Q86XH1 822 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 HYPKQ9NX55 129 aa8.6□□□□□ -1.03
CDKL5-201ENST00000379989 FRMD3A2A2Y4 597 aa8.59□□□□□ -1.03
CDKL5-201ENST00000379989 FAM83GA6ND36 823 aa8.59□□□□□ -1.03
CDKL5-201ENST00000379989 TATP17735 454 aaPredicted RBP8.59□□□□□ -1.03
CDKL5-201ENST00000379989 ANKRD18AQ8IVF6 992 aa8.59□□□□□ -1.03
CDKL5-201ENST00000379989 DBF4Q9UBU7 674 aaPredicted RBP8.59□□□□□ -1.03
CDKL5-201ENST00000379989 LRP6O75581 1613 aa8.59□□□□□ -1.03
CDKL5-201ENST00000379989 TMCO5BA8MYB1 307 aa8.59□□□□□ -1.03
CDKL5-201ENST00000379989 RNMTO43148 476 aaKnown RBP8.59□□□□□ -1.03
CDKL5-201ENST00000379989 DDX58O95786 925 aaKnown RBP8.59□□□□□ -1.03
CDKL5-201ENST00000379989 EIF4A1P60842 406 aaKnown RBP8.59□□□□□ -1.03
CDKL5-201ENST00000379989 FLIIQ13045 1269 aa8.59□□□□□ -1.03
CDKL5-201ENST00000379989 GNL2Q13823 731 aaKnown RBP8.59□□□□□ -1.03
CDKL5-201ENST00000379989 TRIM65Q6PJ69 517 aa8.59□□□□□ -1.03
CDKL5-201ENST00000379989 RAPGEF4Q8WZA2 1011 aa8.59□□□□□ -1.03
CDKL5-201ENST00000379989 THUMPD2Q9BTF0 503 aaKnown RBP8.59□□□□□ -1.03
CDKL5-201ENST00000379989 PALD1Q9ULE6 856 aa8.59□□□□□ -1.03
CDKL5-201ENST00000379989 RGPD2P0DJD1 1756 aa8.59□□□□□ -1.03
CDKL5-201ENST00000379989 MYO1FO00160 1098 aa8.59□□□□□ -1.04
CDKL5-201ENST00000379989 STX6O43752 255 aa8.59□□□□□ -1.04
CDKL5-201ENST00000379989 GCKP35557 465 aa8.59□□□□□ -1.04
CDKL5-201ENST00000379989 RBBP5Q15291 538 aaKnown RBP8.59□□□□□ -1.04
CDKL5-201ENST00000379989 C16orf71Q8IYS4 520 aaPredicted RBP8.59□□□□□ -1.04
CDKL5-201ENST00000379989 XAGE2Q96GT9 111 aa8.59□□□□□ -1.04
CDKL5-201ENST00000379989 TNMDQ9H2S6 317 aa8.59□□□□□ -1.04
CDKL5-201ENST00000379989 CHMP3Q9Y3E7 222 aa8.59□□□□□ -1.04
CDKL5-201ENST00000379989 PLCH1Q4KWH8 1693 aa8.58□□□□□ -1.04
CDKL5-201ENST00000379989 PHACTR2O75167 634 aa8.58□□□□□ -1.04
CDKL5-201ENST00000379989 SYT1P21579 422 aa8.58□□□□□ -1.04
CDKL5-201ENST00000379989 INPP5BP32019 993 aa8.58□□□□□ -1.04
CDKL5-201ENST00000379989 FNTAP49354 379 aa8.58□□□□□ -1.04
CDKL5-201ENST00000379989 BEND6Q5SZJ8 279 aaPredicted RBP8.58□□□□□ -1.04
CDKL5-201ENST00000379989 CEP85Q6P2H3 762 aa8.58□□□□□ -1.04
CDKL5-201ENST00000379989 ZNF530Q6P9A1 599 aaPredicted RBP8.58□□□□□ -1.04
CDKL5-201ENST00000379989 RBM43Q6ZSC3 357 aaKnown RBP8.58□□□□□ -1.04
CDKL5-201ENST00000379989 HOMER1Q86YM7 354 aa8.58□□□□□ -1.04
CDKL5-201ENST00000379989 MSL3Q8N5Y2 521 aaKnown RBP8.58□□□□□ -1.04
CDKL5-201ENST00000379989 ZBTB10Q96DT7 871 aa8.58□□□□□ -1.04
CDKL5-201ENST00000379989 FAM204AQ9H8W3 233 aa8.58□□□□□ -1.04
CDKL5-201ENST00000379989 AHDC1Q5TGY3 1603 aaPredicted RBP8.58□□□□□ -1.04
CDKL5-201ENST00000379989 CLNS1AP54105 237 aaKnown RBP8.58□□□□□ -1.04
CDKL5-201ENST00000379989 IQCB1Q15051 598 aa8.58□□□□□ -1.04
CDKL5-201ENST00000379989 NUTM1Q86Y26 1132 aa8.58□□□□□ -1.04
CDKL5-201ENST00000379989 KIRREL3Q8IZU9 778 aa8.58□□□□□ -1.04
CDKL5-201ENST00000379989 DRAXINQ8NBI3 349 aaPredicted RBP8.58□□□□□ -1.04
CDKL5-201ENST00000379989 RABGGTAQ92696 567 aa8.58□□□□□ -1.04
CDKL5-201ENST00000379989 ECEL1O95672 775 aa8.57□□□□□ -1.04
CDKL5-201ENST00000379989 MTX1Q13505 466 aa8.57□□□□□ -1.04
CDKL5-201ENST00000379989 BRD3Q15059 726 aa8.57□□□□□ -1.04
CDKL5-201ENST00000379989 IFNL2Q8IZJ0 200 aa8.57□□□□□ -1.04
CDKL5-201ENST00000379989 FAM71BQ8TC56 605 aa8.57□□□□□ -1.04
CDKL5-201ENST00000379989 OTUD7AQ8TE49 926 aaPredicted RBP8.57□□□□□ -1.04
CDKL5-201ENST00000379989 DCAF5Q96JK2 942 aa8.57□□□□□ -1.04
CDKL5-201ENST00000379989 ORAI2Q96SN7 254 aa8.57□□□□□ -1.04
CDKL5-201ENST00000379989 CAPN7Q9Y6W3 813 aa8.57□□□□□ -1.04
CDKL5-201ENST00000379989 PAPPAQ13219 1627 aa8.57□□□□□ -1.04
CDKL5-201ENST00000379989 A0A1B0GUA9 196 aa8.57□□□□□ -1.04
CDKL5-201ENST00000379989 FOXO3O43524 673 aa8.57□□□□□ -1.04
CDKL5-201ENST00000379989 EIF3JO75822 258 aaKnown RBP8.57□□□□□ -1.04
CDKL5-201ENST00000379989 PECAM1P16284 738 aaPredicted RBP8.57□□□□□ -1.04
CDKL5-201ENST00000379989 CCT5P48643 541 aa8.57□□□□□ -1.04
CDKL5-201ENST00000379989 ATP8B2P98198 1209 aa8.57□□□□□ -1.04
CDKL5-201ENST00000379989 NFXL1Q6ZNB6 911 aa8.57□□□□□ -1.04
CDKL5-201ENST00000379989 HDXQ7Z353 690 aa8.57□□□□□ -1.04
CDKL5-201ENST00000379989 KDM4CQ9H3R0 1056 aa8.57□□□□□ -1.04
CDKL5-201ENST00000379989 ZNF232Q9UNY5 417 aa8.57□□□□□ -1.04
CDKL5-201ENST00000379989 RAB27AP51159 221 aa8.57□□□□□ -1.04
CDKL5-201ENST00000379989 GSDMDP57764 484 aa8.57□□□□□ -1.04
CDKL5-201ENST00000379989 SF3A1Q15459 793 aaKnown RBP8.57□□□□□ -1.04
CDKL5-201ENST00000379989 PDCD2Q16342 344 aaPredicted RBP8.57□□□□□ -1.04
CDKL5-201ENST00000379989 HDGFL1Q5TGJ6 251 aa8.57□□□□□ -1.04
CDKL5-201ENST00000379989 NUTM2GQ5VZR2 741 aa8.57□□□□□ -1.04
CDKL5-201ENST00000379989 CDCA2Q69YH5 1023 aaPredicted RBP8.57□□□□□ -1.04
CDKL5-201ENST00000379989 SUGCTQ9HAC7 445 aa8.57□□□□□ -1.04
CDKL5-201ENST00000379989 ATP6V1DQ9Y5K8 247 aa8.57□□□□□ -1.04
CDKL5-201ENST00000379989 COL14A1Q05707 1796 aaKnown RBP8.57□□□□□ -1.04
CDKL5-201ENST00000379989 RGPD5Q99666 1765 aa8.57□□□□□ -1.04
CDKL5-201ENST00000379989 PPFIA2O75334 1257 aa8.56□□□□□ -1.04
CDKL5-201ENST00000379989 IBSPP21815 317 aaPredicted RBP8.56□□□□□ -1.04
CDKL5-201ENST00000379989 KCNJ6P48051 423 aa8.56□□□□□ -1.04
CDKL5-201ENST00000379989 DCTN1Q14203 1278 aa8.56□□□□□ -1.04
CDKL5-201ENST00000379989 HNRNPLLQ8WVV9 542 aaKnown RBP8.56□□□□□ -1.04
CDKL5-201ENST00000379989 IRX2Q9BZI1 471 aaPredicted RBP8.56□□□□□ -1.04
CDKL5-201ENST00000379989 UPF3BQ9BZI7 483 aaKnown RBP8.56□□□□□ -1.04
CDKL5-201ENST00000379989 OSBPL5Q9H0X9 879 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms