RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 SMIM23A6NLE4 172 aa12.57□□□□□ -0.4
PTCHD1-201ENST00000379361 YWHAEP62258 255 aaKnown RBP12.57□□□□□ -0.4
PTCHD1-201ENST00000379361 UAP1Q16222 522 aaPredicted RBP12.57□□□□□ -0.4
PTCHD1-201ENST00000379361 DCAF17Q5H9S7 520 aaPredicted RBP12.57□□□□□ -0.4
PTCHD1-201ENST00000379361 NSD3Q9BZ95 1437 aa12.57□□□□□ -0.4
PTCHD1-201ENST00000379361 CARD10Q9BWT7 1032 aa12.57□□□□□ -0.4
PTCHD1-201ENST00000379361 CPSF2Q9P2I0 782 aaKnown RBP12.57□□□□□ -0.4
PTCHD1-201ENST00000379361 UBE2HP62256 183 aa12.57□□□□□ -0.4
PTCHD1-201ENST00000379361 CDR2Q01850 454 aa12.57□□□□□ -0.4
PTCHD1-201ENST00000379361 UBXN1Q04323 297 aa12.57□□□□□ -0.4
PTCHD1-201ENST00000379361 TCIRG1Q13488 830 aa12.57□□□□□ -0.4
PTCHD1-201ENST00000379361 CEP85LQ5SZL2 805 aa12.57□□□□□ -0.4
PTCHD1-201ENST00000379361 GLT8D2Q9H1C3 349 aa12.57□□□□□ -0.4
PTCHD1-201ENST00000379361 ERCC3P19447 782 aa12.56□□□□□ -0.4
PTCHD1-201ENST00000379361 F8W031 263 aaPredicted RBP12.56□□□□□ -0.4
PTCHD1-201ENST00000379361 NEDD9Q14511 834 aa12.56□□□□□ -0.4
PTCHD1-201ENST00000379361 EP400NLQ6ZTU2 488 aa12.56□□□□□ -0.4
PTCHD1-201ENST00000379361 ARHGEF10LQ9HCE6 1279 aa12.56□□□□□ -0.4
PTCHD1-201ENST00000379361 GKAP1Q5VSY0 366 aaPredicted RBP12.56□□□□□ -0.4
PTCHD1-201ENST00000379361 TOM1O60784 492 aa12.56□□□□□ -0.4
PTCHD1-201ENST00000379361 TUBB4AP04350 444 aa12.56□□□□□ -0.4
PTCHD1-201ENST00000379361 SPDYE16A6NNV3 312 aaPredicted RBP12.56□□□□□ -0.4
PTCHD1-201ENST00000379361 SPDYE2Q495Y8 402 aa12.56□□□□□ -0.4
PTCHD1-201ENST00000379361 MIS18AQ9NYP9 233 aa12.56□□□□□ -0.4
PTCHD1-201ENST00000379361 MCM4P33991 863 aa12.56□□□□□ -0.4
PTCHD1-201ENST00000379361 GTF2A1P52655 376 aaPredicted RBP12.56□□□□□ -0.4
PTCHD1-201ENST00000379361 KRT3P12035 628 aa12.56□□□□□ -0.4
PTCHD1-201ENST00000379361 HAUS3Q68CZ6 603 aa12.56□□□□□ -0.4
PTCHD1-201ENST00000379361 ZFP91Q96JP5 570 aaPredicted RBP12.56□□□□□ -0.4
PTCHD1-201ENST00000379361 DACT3Q96B18 629 aaPredicted RBP12.55□□□□□ -0.4
PTCHD1-201ENST00000379361 ZNF165P49910 485 aa12.55□□□□□ -0.4
PTCHD1-201ENST00000379361 LMNTD2Q8IXW0 634 aa12.55□□□□□ -0.4
PTCHD1-201ENST00000379361 SLC4A4Q9Y6R1 1079 aa12.55□□□□□ -0.4
PTCHD1-201ENST00000379361 RFC1P35251 1148 aaPredicted RBP12.55□□□□□ -0.4
PTCHD1-201ENST00000379361 TSNAXIP1Q2TAA8 658 aa12.55□□□□□ -0.4
PTCHD1-201ENST00000379361 CAPZA3Q96KX2 299 aa12.55□□□□□ -0.4
PTCHD1-201ENST00000379361 SLC12A5Q9H2X9 1139 aa12.55□□□□□ -0.4
PTCHD1-201ENST00000379361 HAND2P61296 217 aa12.55□□□□□ -0.4
PTCHD1-201ENST00000379361 RPS6KA2Q15349 733 aa12.55□□□□□ -0.4
PTCHD1-201ENST00000379361 GOLGA8CPA6NN73 597 aa12.55□□□□□ -0.4
PTCHD1-201ENST00000379361 VWA3BQ502W6 1294 aa12.55□□□□□ -0.4
PTCHD1-201ENST00000379361 PHLDB2Q86SQ0 1253 aa12.55□□□□□ -0.4
PTCHD1-201ENST00000379361 MCUR1Q96AQ8 359 aa12.55□□□□□ -0.4
PTCHD1-201ENST00000379361 AFMP43652 599 aa12.55□□□□□ -0.4
PTCHD1-201ENST00000379361 MCM6Q14566 821 aa12.55□□□□□ -0.4
PTCHD1-201ENST00000379361 AZI2Q9H6S1 392 aa12.55□□□□□ -0.4
PTCHD1-201ENST00000379361 DNM2P50570 870 aa12.55□□□□□ -0.4
PTCHD1-201ENST00000379361 TUBBP07437 444 aa12.54□□□□□ -0.4
PTCHD1-201ENST00000379361 ATP6V1AP38606 617 aa12.54□□□□□ -0.4
PTCHD1-201ENST00000379361 ECHDC1Q9NTX5 307 aa12.54□□□□□ -0.4
PTCHD1-201ENST00000379361 FGD5Q6ZNL6 1462 aa12.54□□□□□ -0.4
PTCHD1-201ENST00000379361 CALUO43852 315 aaPredicted RBP12.54□□□□□ -0.4
PTCHD1-201ENST00000379361 NKTRP30414 1462 aaKnown RBP12.54□□□□□ -0.4
PTCHD1-201ENST00000379361 EBAG9O00559 213 aa12.54□□□□□ -0.4
PTCHD1-201ENST00000379361 TERF1P54274 439 aa12.54□□□□□ -0.4
PTCHD1-201ENST00000379361 SPOPO43791 374 aa12.54□□□□□ -0.4
PTCHD1-201ENST00000379361 FAM200AQ8TCP9 573 aa12.54□□□□□ -0.4
PTCHD1-201ENST00000379361 MSH6P52701 1360 aa12.54□□□□□ -0.4
PTCHD1-201ENST00000379361 SNRPA1P09661 255 aaKnown RBP12.54□□□□□ -0.4
PTCHD1-201ENST00000379361 KCNG1Q9UIX4 513 aa12.54□□□□□ -0.4
PTCHD1-201ENST00000379361 AMOTL2Q9Y2J4 779 aa12.54□□□□□ -0.4
PTCHD1-201ENST00000379361 KRT9P35527 623 aa12.54□□□□□ -0.4
PTCHD1-201ENST00000379361 KRT222Q8N1A0 295 aa12.54□□□□□ -0.4
PTCHD1-201ENST00000379361 MAGEB6P1A0A0J9YX57 407 aa12.54□□□□□ -0.4
PTCHD1-201ENST00000379361 ANKRD2Q9GZV1 360 aa12.54□□□□□ -0.4
PTCHD1-201ENST00000379361 CCDC8Q9H0W5 538 aaPredicted RBP12.54□□□□□ -0.4
PTCHD1-201ENST00000379361 CLSTN2Q9H4D0 955 aa12.54□□□□□ -0.4
PTCHD1-201ENST00000379361 GJB2P29033 226 aa12.53□□□□□ -0.4
PTCHD1-201ENST00000379361 CEP57Q86XR8 500 aa12.53□□□□□ -0.4
PTCHD1-201ENST00000379361 TMEM57Q8N5G2 664 aa12.53□□□□□ -0.4
PTCHD1-201ENST00000379361 SKA2Q8WVK7 121 aaPredicted RBP12.53□□□□□ -0.4
PTCHD1-201ENST00000379361 RBBP5Q15291 538 aaKnown RBP12.53□□□□□ -0.4
PTCHD1-201ENST00000379361 ZSWIM4Q9H7M6 989 aa12.53□□□□□ -0.4
PTCHD1-201ENST00000379361 BAG5Q9UL15 447 aa12.53□□□□□ -0.4
PTCHD1-201ENST00000379361 RBM28Q9NW13 759 aaKnown RBP12.53□□□□□ -0.4
PTCHD1-201ENST00000379361 RTCBQ9Y3I0 505 aaKnown RBP12.53□□□□□ -0.4
PTCHD1-201ENST00000379361 PARP1P09874 1014 aaKnown RBP12.53□□□□□ -0.4
PTCHD1-201ENST00000379361 ADCY5O95622 1261 aa12.53□□□□□ -0.4
PTCHD1-201ENST00000379361 ZNF853P0CG23 659 aa12.53□□□□□ -0.4
PTCHD1-201ENST00000379361 LUC7L2Q9Y383 392 aaKnown RBP12.53□□□□□ -0.4
PTCHD1-201ENST00000379361 SND1Q7KZF4 910 aaKnown RBP eCLIP12.53□□□□□ -0.4
PTCHD1-201ENST00000379361 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.53□□□□□ -0.4
PTCHD1-201ENST00000379361 LEO1Q8WVC0 666 aaPredicted RBP12.53□□□□□ -0.4
PTCHD1-201ENST00000379361 PICALMQ13492 652 aa12.53□□□□□ -0.4
PTCHD1-201ENST00000379361 IRAK4Q9NWZ3 460 aa12.53□□□□□ -0.4
PTCHD1-201ENST00000379361 CNGA4Q8IV77 575 aa12.53□□□□□ -0.4
PTCHD1-201ENST00000379361 ZBTB21Q9ULJ3 1066 aa12.53□□□□□ -0.4
PTCHD1-201ENST00000379361 ACTN4O43707 911 aaKnown RBP12.52□□□□□ -0.4
PTCHD1-201ENST00000379361 ZC3H12CQ9C0D7 883 aaKnown RBP12.52□□□□□ -0.4
PTCHD1-201ENST00000379361 EFCAB5A4FU69 1503 aa12.52□□□□□ -0.4
PTCHD1-201ENST00000379361 ZKSCAN3Q9BRR0 538 aa12.52□□□□□ -0.4
PTCHD1-201ENST00000379361 DDX27Q96GQ7 796 aaKnown RBP12.52□□□□□ -0.4
PTCHD1-201ENST00000379361 NBPF3Q9H094 633 aa12.52□□□□□ -0.4
PTCHD1-201ENST00000379361 TTLL3Q9Y4R7 772 aa12.52□□□□□ -0.4
PTCHD1-201ENST00000379361 TCHHQ07283 1943 aa12.52□□□□□ -0.41
PTCHD1-201ENST00000379361 HARSP12081 509 aaKnown RBP12.52□□□□□ -0.41
PTCHD1-201ENST00000379361 B4GALNT4Q76KP1 1039 aa12.52□□□□□ -0.41
PTCHD1-201ENST00000379361 PANK2Q9BZ23 570 aa12.52□□□□□ -0.41
PTCHD1-201ENST00000379361 KNTC1P50748 2209 aa12.52□□□□□ -0.41
PTCHD1-201ENST00000379361 UVSSAQ2YD98 709 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms