RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 KCNJ6P48051 423 aa12.4□□□□□ -0.42
USP6NL-202ENST00000379237 MEX3CQ5U5Q3 659 aaKnown RBP12.4□□□□□ -0.42
USP6NL-202ENST00000379237 AFAP1Q8N556 730 aa12.4□□□□□ -0.42
USP6NL-202ENST00000379237 HMG20BQ9P0W2 317 aa12.4□□□□□ -0.42
USP6NL-202ENST00000379237 TCHHQ07283 1943 aa12.4□□□□□ -0.42
USP6NL-202ENST00000379237 OTUD7BQ6GQQ9 843 aa12.4□□□□□ -0.42
USP6NL-202ENST00000379237 MIEF2Q96C03 454 aa12.4□□□□□ -0.42
USP6NL-202ENST00000379237 SH3GL3Q99963 347 aa12.4□□□□□ -0.42
USP6NL-202ENST00000379237 NFE2L3Q9Y4A8 694 aa12.4□□□□□ -0.42
USP6NL-202ENST00000379237 ERVK-7P63135 1459 aa12.4□□□□□ -0.42
USP6NL-202ENST00000379237 ADGBQ8N7X0 1667 aa12.4□□□□□ -0.42
USP6NL-202ENST00000379237 ENO4A6NNW6 628 aa12.4□□□□□ -0.42
USP6NL-202ENST00000379237 TMEM232C9JQI7 657 aa12.4□□□□□ -0.42
USP6NL-202ENST00000379237 SKAP2O75563 359 aaPredicted RBP12.4□□□□□ -0.42
USP6NL-202ENST00000379237 SLC8A1P32418 973 aa12.4□□□□□ -0.42
USP6NL-202ENST00000379237 PDCLQ13371 301 aa12.4□□□□□ -0.42
USP6NL-202ENST00000379237 SF3B2Q13435 895 aaKnown RBP12.4□□□□□ -0.42
USP6NL-202ENST00000379237 RALYLQ86SE5 291 aaKnown RBP12.4□□□□□ -0.42
USP6NL-202ENST00000379237 SAAL1Q96ER3 474 aa12.4□□□□□ -0.42
USP6NL-202ENST00000379237 PNKPQ96T60 521 aa12.4□□□□□ -0.42
USP6NL-202ENST00000379237 PPANQ9NQ55 473 aaKnown RBP12.4□□□□□ -0.42
USP6NL-202ENST00000379237 PLEKHO1Q53GL0 409 aaPredicted RBP12.4□□□□□ -0.43
USP6NL-202ENST00000379237 SPATS2Q86XZ4 545 aaKnown RBP12.4□□□□□ -0.43
USP6NL-202ENST00000379237 PRAM1Q96QH2 718 aa12.4□□□□□ -0.43
USP6NL-202ENST00000379237 ITSN2Q9NZM3 1697 aa12.39□□□□□ -0.43
USP6NL-202ENST00000379237 ARHGAP5Q13017 1502 aa12.39□□□□□ -0.43
USP6NL-202ENST00000379237 TTC21BQ7Z4L5 1316 aa12.39□□□□□ -0.43
USP6NL-202ENST00000379237 A6NNZ2 444 aa12.39□□□□□ -0.43
USP6NL-202ENST00000379237 YEATS4O95619 227 aa12.39□□□□□ -0.43
USP6NL-202ENST00000379237 STX17P56962 302 aa12.39□□□□□ -0.43
USP6NL-202ENST00000379237 SF3A3Q12874 501 aaKnown RBP eCLIP12.39□□□□□ -0.43
USP6NL-202ENST00000379237 TUBB8Q3ZCM7 444 aa12.39□□□□□ -0.43
USP6NL-202ENST00000379237 NCAPH2Q6IBW4 605 aa12.39□□□□□ -0.43
USP6NL-202ENST00000379237 VSTM4Q8IW00 320 aa12.39□□□□□ -0.43
USP6NL-202ENST00000379237 CDC5LQ99459 802 aaKnown RBP12.39□□□□□ -0.43
USP6NL-202ENST00000379237 STAP2Q9UGK3 403 aa12.39□□□□□ -0.43
USP6NL-202ENST00000379237 L1RE1Q9UN81 338 aa12.39□□□□□ -0.43
USP6NL-202ENST00000379237 TTF2Q9UNY4 1162 aaKnown RBP12.39□□□□□ -0.43
USP6NL-202ENST00000379237 CFAP58Q5T655 872 aa12.39□□□□□ -0.43
USP6NL-202ENST00000379237 TRMT44Q8IYL2 757 aaKnown RBP12.39□□□□□ -0.43
USP6NL-202ENST00000379237 NCOA5Q9HCD5 579 aaKnown RBP12.39□□□□□ -0.43
USP6NL-202ENST00000379237 SOWAHDA6NJG2 315 aa12.39□□□□□ -0.43
USP6NL-202ENST00000379237 N4BP3O15049 544 aa12.39□□□□□ -0.43
USP6NL-202ENST00000379237 PAFAH1B1P43034 410 aa12.39□□□□□ -0.43
USP6NL-202ENST00000379237 RESTQ13127 1097 aa12.39□□□□□ -0.43
USP6NL-202ENST00000379237 SAFBQ15424 915 aaKnown RBP eCLIP12.39□□□□□ -0.43
USP6NL-202ENST00000379237 ADALQ6DHV7 355 aa12.39□□□□□ -0.43
USP6NL-202ENST00000379237 RCOR1Q9UKL0 485 aa12.39□□□□□ -0.43
USP6NL-202ENST00000379237 CPLX4Q7Z7G2 160 aa12.38□□□□□ -0.43
USP6NL-202ENST00000379237 LTV1Q96GA3 475 aaPredicted RBP12.38□□□□□ -0.43
USP6NL-202ENST00000379237 AOX1Q06278 1338 aa12.38□□□□□ -0.43
USP6NL-202ENST00000379237 IRAK1P51617 712 aa12.38□□□□□ -0.43
USP6NL-202ENST00000379237 ATL3Q6DD88 541 aa12.38□□□□□ -0.43
USP6NL-202ENST00000379237 TRIM65Q6PJ69 517 aa12.38□□□□□ -0.43
USP6NL-202ENST00000379237 RPUSD2Q8IZ73 545 aaKnown RBP12.38□□□□□ -0.43
USP6NL-202ENST00000379237 ANKRD18BA2A2Z9 1011 aa12.38□□□□□ -0.43
USP6NL-202ENST00000379237 HLTFQ14527 1009 aaKnown RBP eCLIP12.38□□□□□ -0.43
USP6NL-202ENST00000379237 SGSM3Q96HU1 749 aa12.38□□□□□ -0.43
USP6NL-202ENST00000379237 SLF1Q9BQI6 1058 aa12.38□□□□□ -0.43
USP6NL-202ENST00000379237 PLA2R1Q13018 1463 aa12.38□□□□□ -0.43
USP6NL-202ENST00000379237 ERBB3P21860 1342 aa12.38□□□□□ -0.43
USP6NL-202ENST00000379237 IQSEC2Q5JU85 1478 aa12.38□□□□□ -0.43
USP6NL-202ENST00000379237 MAGI1Q96QZ7 1491 aaPredicted RBP12.38□□□□□ -0.43
USP6NL-202ENST00000379237 TMCO5BA8MYB1 307 aa12.38□□□□□ -0.43
USP6NL-202ENST00000379237 GSCP56915 257 aaPredicted RBP12.38□□□□□ -0.43
USP6NL-202ENST00000379237 PSMD2Q13200 908 aa12.38□□□□□ -0.43
USP6NL-202ENST00000379237 PNOCQ13519 176 aa12.38□□□□□ -0.43
USP6NL-202ENST00000379237 RSRC2Q7L4I2 434 aaKnown RBP12.38□□□□□ -0.43
USP6NL-202ENST00000379237 GSPT2Q8IYD1 628 aaKnown RBP12.38□□□□□ -0.43
USP6NL-202ENST00000379237 HNRNPLLQ8WVV9 542 aaKnown RBP12.38□□□□□ -0.43
USP6NL-202ENST00000379237 ENC1O14682 589 aa12.37□□□□□ -0.43
USP6NL-202ENST00000379237 NFXL1Q6ZNB6 911 aa12.37□□□□□ -0.43
USP6NL-202ENST00000379237 RBM43Q6ZSC3 357 aaKnown RBP12.37□□□□□ -0.43
USP6NL-202ENST00000379237 NUTM2AQ8IVF1 878 aaPredicted RBP12.37□□□□□ -0.43
USP6NL-202ENST00000379237 DPF2Q92785 391 aa12.37□□□□□ -0.43
USP6NL-202ENST00000379237 REREQ9P2R6 1566 aa12.37□□□□□ -0.43
USP6NL-202ENST00000379237 GOLGA8KD6RF30 607 aa12.37□□□□□ -0.43
USP6NL-202ENST00000379237 MAP2K7O14733 419 aa12.37□□□□□ -0.43
USP6NL-202ENST00000379237 CHST3Q7LGC8 479 aa12.37□□□□□ -0.43
USP6NL-202ENST00000379237 OSCARQ8IYS5 282 aa12.37□□□□□ -0.43
USP6NL-202ENST00000379237 PPP1R7Q15435 360 aa12.37□□□□□ -0.43
USP6NL-202ENST00000379237 CCDC122Q5T0U0 273 aa12.37□□□□□ -0.43
USP6NL-202ENST00000379237 IFT81Q8WYA0 676 aa12.37□□□□□ -0.43
USP6NL-202ENST00000379237 YIPF3Q9GZM5 350 aa12.37□□□□□ -0.43
USP6NL-202ENST00000379237 TAX1BP1Q86VP1 789 aa12.36□□□□□ -0.43
USP6NL-202ENST00000379237 CDK19Q9BWU1 502 aa12.36□□□□□ -0.43
USP6NL-202ENST00000379237 LRRIQ1Q96JM4 1722 aa12.36□□□□□ -0.43
USP6NL-202ENST00000379237 LRRIQ3A6PVS8 624 aaPredicted RBP12.36□□□□□ -0.43
USP6NL-202ENST00000379237 MEFVO15553 781 aaPredicted RBP12.36□□□□□ -0.43
USP6NL-202ENST00000379237 RPS6KA5O75582 802 aa12.36□□□□□ -0.43
USP6NL-202ENST00000379237 CRYMQ14894 314 aa12.36□□□□□ -0.43
USP6NL-202ENST00000379237 TAF7Q15545 349 aaPredicted RBP12.36□□□□□ -0.43
USP6NL-202ENST00000379237 IMMTQ16891 758 aaKnown RBP12.36□□□□□ -0.43
USP6NL-202ENST00000379237 NBPF20Q3BBV1 942 aa12.36□□□□□ -0.43
USP6NL-202ENST00000379237 NAA16Q6N069 864 aaPredicted RBP12.36□□□□□ -0.43
USP6NL-202ENST00000379237 SHANK2Q9UPX8 1470 aa12.36□□□□□ -0.43
USP6NL-202ENST00000379237 CNGA4Q8IV77 575 aa12.36□□□□□ -0.43
USP6NL-202ENST00000379237 U3KPZ7 1027 aaPredicted RBP12.36□□□□□ -0.43
USP6NL-202ENST00000379237 ADGRL1O94910 1474 aa12.36□□□□□ -0.43
USP6NL-202ENST00000379237 PFKFB1P16118 471 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms