RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 LTBP1Q14766 1721 aa20.61■□□□□ 0.89
THUMPD2-201ENST00000378727 PATL2C9JE40 543 aaKnown RBP20.6■□□□□ 0.89
THUMPD2-201ENST00000378727 APPP05067 770 aa20.6■□□□□ 0.89
THUMPD2-201ENST00000378727 MIGA1Q8NAN2 632 aa20.6■□□□□ 0.89
THUMPD2-201ENST00000378727 ZNF213O14771 459 aa20.6■□□□□ 0.89
THUMPD2-201ENST00000378727 SRGNP10124 158 aa20.6■□□□□ 0.89
THUMPD2-201ENST00000378727 ALX1Q15699 326 aa20.6■□□□□ 0.89
THUMPD2-201ENST00000378727 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.6■□□□□ 0.89
THUMPD2-201ENST00000378727 QSER1Q2KHR3 1735 aa20.6■□□□□ 0.89
THUMPD2-201ENST00000378727 GSG1L2A8MUP6 293 aa20.59■□□□□ 0.89
THUMPD2-201ENST00000378727 PRKAB2O43741 272 aa20.59■□□□□ 0.89
THUMPD2-201ENST00000378727 ZMYM6O95789 1325 aa20.59■□□□□ 0.89
THUMPD2-201ENST00000378727 UFL1O94874 794 aa20.58■□□□□ 0.89
THUMPD2-201ENST00000378727 CHAF1AQ13111 956 aaPredicted RBP20.58■□□□□ 0.89
THUMPD2-201ENST00000378727 GBP4Q96PP9 640 aa20.58■□□□□ 0.89
THUMPD2-201ENST00000378727 AGXT2Q9BYV1 514 aa20.58■□□□□ 0.89
THUMPD2-201ENST00000378727 PODXL2Q9NZ53 605 aa20.58■□□□□ 0.89
THUMPD2-201ENST00000378727 BRD1O95696 1058 aa20.58■□□□□ 0.88
THUMPD2-201ENST00000378727 ATP2B4P23634 1241 aa20.58■□□□□ 0.88
THUMPD2-201ENST00000378727 IFNL3Q8IZI9 196 aa20.58■□□□□ 0.88
THUMPD2-201ENST00000378727 TDRD7Q8NHU6 1098 aaKnown RBP20.58■□□□□ 0.88
THUMPD2-201ENST00000378727 BRF1Q92994 677 aa20.58■□□□□ 0.88
THUMPD2-201ENST00000378727 PPEF1O14829 653 aaPredicted RBP20.57■□□□□ 0.88
THUMPD2-201ENST00000378727 DTNBO60941 627 aa20.57■□□□□ 0.88
THUMPD2-201ENST00000378727 CHST3Q7LGC8 479 aa20.57■□□□□ 0.88
THUMPD2-201ENST00000378727 TBC1D10CQ8IV04 446 aa20.57■□□□□ 0.88
THUMPD2-201ENST00000378727 NSUN4Q96CB9 384 aaKnown RBP20.57■□□□□ 0.88
THUMPD2-201ENST00000378727 STK32BQ9NY57 414 aa20.57■□□□□ 0.88
THUMPD2-201ENST00000378727 GGA1Q9UJY5 639 aa20.57■□□□□ 0.88
THUMPD2-201ENST00000378727 JAG2Q9Y219 1238 aa20.57■□□□□ 0.88
THUMPD2-201ENST00000378727 NPR1P16066 1061 aa20.57■□□□□ 0.88
THUMPD2-201ENST00000378727 GNAT2P19087 354 aa20.57■□□□□ 0.88
THUMPD2-201ENST00000378727 NAA16Q6N069 864 aaPredicted RBP20.57■□□□□ 0.88
THUMPD2-201ENST00000378727 TMC4Q7Z404 712 aa20.57■□□□□ 0.88
THUMPD2-201ENST00000378727 MB21D2Q8IYB1 491 aaPredicted RBP20.57■□□□□ 0.88
THUMPD2-201ENST00000378727 RIOK1Q9BRS2 568 aaKnown RBP20.57■□□□□ 0.88
THUMPD2-201ENST00000378727 POLLQ9UGP5 575 aa20.57■□□□□ 0.88
THUMPD2-201ENST00000378727 SMC3Q9UQE7 1217 aa20.57■□□□□ 0.88
THUMPD2-201ENST00000378727 SLC4A4Q9Y6R1 1079 aa20.57■□□□□ 0.88
THUMPD2-201ENST00000378727 MAST2Q6P0Q8 1798 aa20.56■□□□□ 0.88
THUMPD2-201ENST00000378727 CCDC88AQ3V6T2 1871 aa20.56■□□□□ 0.88
THUMPD2-201ENST00000378727 BAG4O95429 457 aaKnown RBP20.56■□□□□ 0.88
THUMPD2-201ENST00000378727 PRDX5P30044 214 aa20.56■□□□□ 0.88
THUMPD2-201ENST00000378727 PDE6BP35913 854 aa20.56■□□□□ 0.88
THUMPD2-201ENST00000378727 MECOMQ03112 1051 aa20.56■□□□□ 0.88
THUMPD2-201ENST00000378727 ZNF804AQ7Z570 1209 aa20.56■□□□□ 0.88
THUMPD2-201ENST00000378727 SP8Q8IXZ3 490 aa20.56■□□□□ 0.88
THUMPD2-201ENST00000378727 MAGEB6P1A0A0J9YX57 407 aa20.55■□□□□ 0.88
THUMPD2-201ENST00000378727 TBC1D16Q8TBP0 767 aa20.55■□□□□ 0.88
THUMPD2-201ENST00000378727 ATP6V0A2Q9Y487 856 aa20.55■□□□□ 0.88
THUMPD2-201ENST00000378727 CHD4Q14839 1912 aa20.55■□□□□ 0.88
THUMPD2-201ENST00000378727 DDX11L8A8MPP1 907 aa20.55■□□□□ 0.88
THUMPD2-201ENST00000378727 STK3Q13188 491 aa20.55■□□□□ 0.88
THUMPD2-201ENST00000378727 FBXL16Q8N461 479 aa20.55■□□□□ 0.88
THUMPD2-201ENST00000378727 NCOA7Q8NI08 942 aa20.55■□□□□ 0.88
THUMPD2-201ENST00000378727 NKX2-3Q8TAU0 364 aa20.55■□□□□ 0.88
THUMPD2-201ENST00000378727 NAPBQ9H115 298 aa20.55■□□□□ 0.88
THUMPD2-201ENST00000378727 GJB2P29033 226 aa20.54■□□□□ 0.88
THUMPD2-201ENST00000378727 FGD1P98174 961 aa20.54■□□□□ 0.88
THUMPD2-201ENST00000378727 FOXD4L5Q5VV16 416 aaPredicted RBP20.54■□□□□ 0.88
THUMPD2-201ENST00000378727 DEFB132Q7Z7B7 95 aa20.54■□□□□ 0.88
THUMPD2-201ENST00000378727 FOXD4L4Q8WXT5 416 aaPredicted RBP20.54■□□□□ 0.88
THUMPD2-201ENST00000378727 SALL1Q9NSC2 1324 aa20.54■□□□□ 0.88
THUMPD2-201ENST00000378727 ANTXR2P58335 489 aa20.54■□□□□ 0.88
THUMPD2-201ENST00000378727 DYNLL1P63167 89 aaKnown RBP20.54■□□□□ 0.88
THUMPD2-201ENST00000378727 GTF3C6Q969F1 213 aa20.54■□□□□ 0.88
THUMPD2-201ENST00000378727 TIAM2Q8IVF5 1701 aa20.53■□□□□ 0.88
THUMPD2-201ENST00000378727 APOBRQ0VD83 1088 aa20.53■□□□□ 0.88
THUMPD2-201ENST00000378727 CD209Q9NNX6 404 aa20.53■□□□□ 0.88
THUMPD2-201ENST00000378727 GPHNQ9NQX3 736 aaPredicted RBP20.53■□□□□ 0.88
THUMPD2-201ENST00000378727 KIAA1551Q9HCM1 1747 aa20.52■□□□□ 0.88
THUMPD2-201ENST00000378727 SYT1P21579 422 aa20.52■□□□□ 0.88
THUMPD2-201ENST00000378727 MCM5P33992 734 aa20.52■□□□□ 0.88
THUMPD2-201ENST00000378727 OLFM4Q6UX06 510 aa20.52■□□□□ 0.88
THUMPD2-201ENST00000378727 WDR66Q8TBY9 1149 aa20.52■□□□□ 0.88
THUMPD2-201ENST00000378727 SDR42E1Q8WUS8 393 aa20.52■□□□□ 0.88
THUMPD2-201ENST00000378727 MASTLQ96GX5 879 aa20.52■□□□□ 0.88
THUMPD2-201ENST00000378727 NACAP1Q9BZK3 213 aa20.52■□□□□ 0.88
THUMPD2-201ENST00000378727 TACC3Q9Y6A5 838 aa20.52■□□□□ 0.88
THUMPD2-201ENST00000378727 DUOX1Q9NRD9 1551 aa20.52■□□□□ 0.88
THUMPD2-201ENST00000378727 PRC1O43663 620 aa20.52■□□□□ 0.87
THUMPD2-201ENST00000378727 IL1R1P14778 569 aa20.52■□□□□ 0.87
THUMPD2-201ENST00000378727 BAG6P46379 1132 aa20.52■□□□□ 0.87
THUMPD2-201ENST00000378727 RALYLQ86SE5 291 aaKnown RBP20.52■□□□□ 0.87
THUMPD2-201ENST00000378727 NEDD4P46934 1319 aa20.51■□□□□ 0.87
THUMPD2-201ENST00000378727 ALDH1B1P30837 517 aa20.51■□□□□ 0.87
THUMPD2-201ENST00000378727 TDO2P48775 406 aa20.51■□□□□ 0.87
THUMPD2-201ENST00000378727 CHAMP1Q96JM3 812 aa20.51■□□□□ 0.87
THUMPD2-201ENST00000378727 PDGFDQ9GZP0 370 aaPredicted RBP20.51■□□□□ 0.87
THUMPD2-201ENST00000378727 INCENPQ9NQS7 918 aa20.51■□□□□ 0.87
THUMPD2-201ENST00000378727 WDR19Q8NEZ3 1342 aa20.51■□□□□ 0.87
THUMPD2-201ENST00000378727 WDR33Q9C0J8 1336 aaKnown RBP20.51■□□□□ 0.87
THUMPD2-201ENST00000378727 C6orf229H3BNL8 230 aa20.5■□□□□ 0.87
THUMPD2-201ENST00000378727 PFKFB2O60825 505 aa20.5■□□□□ 0.87
THUMPD2-201ENST00000378727 EVCP57679 992 aa20.5■□□□□ 0.87
THUMPD2-201ENST00000378727 CTDSPL2Q05D32 466 aa20.5■□□□□ 0.87
THUMPD2-201ENST00000378727 SCRN1Q12765 414 aa20.5■□□□□ 0.87
THUMPD2-201ENST00000378727 SF3B2Q13435 895 aaKnown RBP20.5■□□□□ 0.87
THUMPD2-201ENST00000378727 GRIK5Q16478 980 aa20.5■□□□□ 0.87
THUMPD2-201ENST00000378727 SPTY2D1Q68D10 685 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms