RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 MXD3Q9BW11 206 aa19.02■□□□□ 0.64
CCDC107-204ENST00000378409 ADAMTSL1Q8N6G6 1762 aa19.01■□□□□ 0.63
CCDC107-204ENST00000378409 MFAP1P55081 439 aaKnown RBP19.01■□□□□ 0.63
CCDC107-204ENST00000378409 MECOMQ03112 1051 aa19.01■□□□□ 0.63
CCDC107-204ENST00000378409 UBE3CQ15386 1083 aa19.01■□□□□ 0.63
CCDC107-204ENST00000378409 DACT2Q5SW24 774 aa19.01■□□□□ 0.63
CCDC107-204ENST00000378409 NAA16Q6N069 864 aaPredicted RBP19.01■□□□□ 0.63
CCDC107-204ENST00000378409 APPBP2Q92624 585 aa19.01■□□□□ 0.63
CCDC107-204ENST00000378409 SEC62Q99442 399 aaKnown RBP19.01■□□□□ 0.63
CCDC107-204ENST00000378409 IL25Q9H293 177 aa19.01■□□□□ 0.63
CCDC107-204ENST00000378409 HELLSQ9NRZ9 838 aa19.01■□□□□ 0.63
CCDC107-204ENST00000378409 RAD50Q92878 1312 aa19■□□□□ 0.63
CCDC107-204ENST00000378409 TCRBV5S4A2TA0A5A2 114 aa19■□□□□ 0.63
CCDC107-204ENST00000378409 SGSM2O43147 1006 aa19■□□□□ 0.63
CCDC107-204ENST00000378409 RAD17O75943 681 aa19■□□□□ 0.63
CCDC107-204ENST00000378409 LMNB1P20700 586 aa19■□□□□ 0.63
CCDC107-204ENST00000378409 CYP7A1P22680 504 aa19■□□□□ 0.63
CCDC107-204ENST00000378409 CERS5Q8N5B7 392 aa19■□□□□ 0.63
CCDC107-204ENST00000378409 NSUN4Q96CB9 384 aaKnown RBP19■□□□□ 0.63
CCDC107-204ENST00000378409 F8W031 263 aaPredicted RBP18.99■□□□□ 0.63
CCDC107-204ENST00000378409 M0R2C6 588 aa18.99■□□□□ 0.63
CCDC107-204ENST00000378409 EIF5BO60841 1220 aaKnown RBP18.99■□□□□ 0.63
CCDC107-204ENST00000378409 FKBP1AP62942 108 aaKnown RBP18.99■□□□□ 0.63
CCDC107-204ENST00000378409 MCMDC2Q4G0Z9 681 aa18.99■□□□□ 0.63
CCDC107-204ENST00000378409 ZNF384Q8TF68 577 aa18.99■□□□□ 0.63
CCDC107-204ENST00000378409 OSBP2Q969R2 916 aa18.99■□□□□ 0.63
CCDC107-204ENST00000378409 SUGT1Q9Y2Z0 365 aa18.99■□□□□ 0.63
CCDC107-204ENST00000378409 MAST3O60307 1309 aa18.99■□□□□ 0.63
CCDC107-204ENST00000378409 PSMD14O00487 310 aa18.98■□□□□ 0.63
CCDC107-204ENST00000378409 IGSF3O75054 1194 aa18.98■□□□□ 0.63
CCDC107-204ENST00000378409 REC8O95072 547 aa18.98■□□□□ 0.63
CCDC107-204ENST00000378409 CCDC129Q6ZRS4 1044 aa18.98■□□□□ 0.63
CCDC107-204ENST00000378409 ZNF589Q86UQ0 364 aaPredicted RBP18.98■□□□□ 0.63
CCDC107-204ENST00000378409 PUS7LQ9H0K6 701 aaKnown RBP18.98■□□□□ 0.63
CCDC107-204ENST00000378409 ANO2Q9NQ90 1003 aa18.98■□□□□ 0.63
CCDC107-204ENST00000378409 CDK5RAP2Q96SN8 1893 aa18.98■□□□□ 0.63
CCDC107-204ENST00000378409 GSTO1P78417 241 aa18.97■□□□□ 0.63
CCDC107-204ENST00000378409 CXCL9Q07325 125 aa18.97■□□□□ 0.63
CCDC107-204ENST00000378409 DIXDC1Q155Q3 683 aa18.97■□□□□ 0.63
CCDC107-204ENST00000378409 ADGRA1Q86SQ6 560 aa18.97■□□□□ 0.63
CCDC107-204ENST00000378409 TTF2Q9UNY4 1162 aaKnown RBP18.97■□□□□ 0.63
CCDC107-204ENST00000378409 ECM29Q5VYK3 1845 aa18.97■□□□□ 0.63
CCDC107-204ENST00000378409 CCDC171Q6TFL3 1326 aa18.97■□□□□ 0.63
CCDC107-204ENST00000378409 GRIN3BO60391 1043 aa18.96■□□□□ 0.63
CCDC107-204ENST00000378409 VIL1P09327 827 aaKnown RBP18.96■□□□□ 0.63
CCDC107-204ENST00000378409 EIF6P56537 245 aaKnown RBP18.96■□□□□ 0.63
CCDC107-204ENST00000378409 CIAPIN1Q6FI81 312 aa18.96■□□□□ 0.63
CCDC107-204ENST00000378409 RSBN1LQ6PCB5 846 aaPredicted RBP18.96■□□□□ 0.63
CCDC107-204ENST00000378409 TMED8Q6PL24 325 aaPredicted RBP18.96■□□□□ 0.63
CCDC107-204ENST00000378409 KIAA1211Q6ZU35 1233 aa18.96■□□□□ 0.63
CCDC107-204ENST00000378409 KIAA0825Q8IV33 1275 aa18.96■□□□□ 0.63
CCDC107-204ENST00000378409 MIGA1Q8NAN2 632 aa18.96■□□□□ 0.63
CCDC107-204ENST00000378409 MYO3BQ8WXR4 1341 aa18.96■□□□□ 0.63
CCDC107-204ENST00000378409 FZD9O00144 591 aa18.95■□□□□ 0.62
CCDC107-204ENST00000378409 MBD4O95243 580 aa18.95■□□□□ 0.62
CCDC107-204ENST00000378409 LDHCP07864 332 aa18.95■□□□□ 0.62
CCDC107-204ENST00000378409 TNIP1Q15025 636 aa18.95■□□□□ 0.62
CCDC107-204ENST00000378409 SLF2Q8IX21 1173 aa18.95■□□□□ 0.62
CCDC107-204ENST00000378409 AIDAQ96BJ3 306 aa18.95■□□□□ 0.62
CCDC107-204ENST00000378409 UPF2Q9HAU5 1272 aaKnown RBP18.95■□□□□ 0.62
CCDC107-204ENST00000378409 RNF181Q9P0P0 153 aa18.95■□□□□ 0.62
CCDC107-204ENST00000378409 MROH7-TTC4A0A0A0MT08 1334 aa18.95■□□□□ 0.62
CCDC107-204ENST00000378409 MAGEB6P1A0A0J9YX57 407 aa18.94■□□□□ 0.62
CCDC107-204ENST00000378409 GPAA1O43292 621 aa18.94■□□□□ 0.62
CCDC107-204ENST00000378409 SCNN1DP51172 638 aa18.94■□□□□ 0.62
CCDC107-204ENST00000378409 NOL10Q9BSC4 688 aaKnown RBP18.94■□□□□ 0.62
CCDC107-204ENST00000378409 ARMT1Q9H993 441 aa18.94■□□□□ 0.62
CCDC107-204ENST00000378409 FOCADQ5VW36 1801 aa18.94■□□□□ 0.62
CCDC107-204ENST00000378409 BAZ2AQ9UIF9 1905 aaKnown RBP18.94■□□□□ 0.62
CCDC107-204ENST00000378409 LSG1Q9H089 658 aaKnown RBP18.93■□□□□ 0.62
CCDC107-204ENST00000378409 AATFQ9NY61 560 aaKnown RBP eCLIP18.93■□□□□ 0.62
CCDC107-204ENST00000378409 ZBTB12Q9Y330 459 aaPredicted RBP18.93■□□□□ 0.62
CCDC107-204ENST00000378409 ZNF541Q9H0D2 1346 aa18.93■□□□□ 0.62
CCDC107-204ENST00000378409 DYNLL1P63167 89 aaKnown RBP18.92■□□□□ 0.62
CCDC107-204ENST00000378409 PTH1RQ03431 593 aa18.92■□□□□ 0.62
CCDC107-204ENST00000378409 C9orf131Q5VYM1 1079 aa18.92■□□□□ 0.62
CCDC107-204ENST00000378409 LCORLQ8N3X6 602 aa18.92■□□□□ 0.62
CCDC107-204ENST00000378409 ZNF784Q8NCA9 323 aaPredicted RBP18.92■□□□□ 0.62
CCDC107-204ENST00000378409 AGBL3Q8NEM8 1001 aa18.92■□□□□ 0.62
CCDC107-204ENST00000378409 TEKT1Q969V4 418 aa18.92■□□□□ 0.62
CCDC107-204ENST00000378409 GMLQ99445 158 aa18.92■□□□□ 0.62
CCDC107-204ENST00000378409 GJA3Q9Y6H8 435 aa18.92■□□□□ 0.62
CCDC107-204ENST00000378409 NAV1Q8NEY1 1877 aa18.92■□□□□ 0.62
CCDC107-204ENST00000378409 STRBPQ96SI9 672 aaKnown RBP18.91■□□□□ 0.62
CCDC107-204ENST00000378409 RIOK1Q9BRS2 568 aaKnown RBP18.91■□□□□ 0.62
CCDC107-204ENST00000378409 USP26Q9BXU7 913 aa18.91■□□□□ 0.62
CCDC107-204ENST00000378409 DAGLAQ9Y4D2 1042 aa18.91■□□□□ 0.62
CCDC107-204ENST00000378409 GAKO14976 1311 aa18.91■□□□□ 0.62
CCDC107-204ENST00000378409 LAMA4Q16363 1823 aa18.9■□□□□ 0.62
CCDC107-204ENST00000378409 BAG3O95817 575 aa18.9■□□□□ 0.62
CCDC107-204ENST00000378409 BTDP43251 543 aa18.9■□□□□ 0.62
CCDC107-204ENST00000378409 CRKP46108 304 aa18.9■□□□□ 0.62
CCDC107-204ENST00000378409 RBM5P52756 815 aaKnown RBP eCLIP18.9■□□□□ 0.62
CCDC107-204ENST00000378409 VPS53Q5VIR6 699 aa18.9■□□□□ 0.62
CCDC107-204ENST00000378409 HHIPL2Q6UWX4 724 aa18.9■□□□□ 0.62
CCDC107-204ENST00000378409 FAM163AQ96GL9 167 aaPredicted RBP18.9■□□□□ 0.62
CCDC107-204ENST00000378409 MYH1P12882 1939 aa18.9■□□□□ 0.62
CCDC107-204ENST00000378409 GPR75-ASB3A0A0A6YYF3 556 aa18.89■□□□□ 0.61
CCDC107-204ENST00000378409 USP17L8P0C7I0 530 aa18.89■□□□□ 0.61
CCDC107-204ENST00000378409 HSPD1P10809 573 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms