RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 KIF22Q14807 665 aa15.89■□□□□ 0.13
TRIM13-202ENST00000378182 IFT74Q96LB3 600 aa15.89■□□□□ 0.13
TRIM13-202ENST00000378182 TNRQ92752 1358 aa15.89■□□□□ 0.13
TRIM13-202ENST00000378182 GSDMDP57764 484 aa15.89■□□□□ 0.13
TRIM13-202ENST00000378182 GPIHBP1Q8IV16 184 aa15.89■□□□□ 0.13
TRIM13-202ENST00000378182 MED10Q9BTT4 135 aa15.89■□□□□ 0.13
TRIM13-202ENST00000378182 ZNF165P49910 485 aa15.89■□□□□ 0.13
TRIM13-202ENST00000378182 NMIQ13287 307 aaPredicted RBP15.89■□□□□ 0.13
TRIM13-202ENST00000378182 ZNF174Q15697 407 aa15.89■□□□□ 0.13
TRIM13-202ENST00000378182 RHPN1Q8TCX5 695 aa15.89■□□□□ 0.13
TRIM13-202ENST00000378182 AATFQ9NY61 560 aaKnown RBP eCLIP15.89■□□□□ 0.13
TRIM13-202ENST00000378182 PPIP5K1Q6PFW1 1433 aa15.89■□□□□ 0.13
TRIM13-202ENST00000378182 SPDYE16A6NNV3 312 aaPredicted RBP15.89■□□□□ 0.13
TRIM13-202ENST00000378182 RIOK3O14730 519 aaKnown RBP15.89■□□□□ 0.13
TRIM13-202ENST00000378182 ERCC3P19447 782 aa15.89■□□□□ 0.13
TRIM13-202ENST00000378182 CCT6AP40227 531 aaKnown RBP15.89■□□□□ 0.13
TRIM13-202ENST00000378182 IRX3P78415 501 aaPredicted RBP15.89■□□□□ 0.13
TRIM13-202ENST00000378182 SPDYE2Q495Y8 402 aa15.89■□□□□ 0.13
TRIM13-202ENST00000378182 PTPN23Q9H3S7 1636 aa15.89■□□□□ 0.13
TRIM13-202ENST00000378182 NCAPH2Q6IBW4 605 aa15.88■□□□□ 0.13
TRIM13-202ENST00000378182 TBC1D7Q9P0N9 293 aa15.88■□□□□ 0.13
TRIM13-202ENST00000378182 GGA1Q9UJY5 639 aa15.88■□□□□ 0.13
TRIM13-202ENST00000378182 AOPEPQ8N6M6 819 aa15.88■□□□□ 0.13
TRIM13-202ENST00000378182 MEIS3Q99687 375 aa15.88■□□□□ 0.13
TRIM13-202ENST00000378182 AFG3L2Q9Y4W6 797 aa15.88■□□□□ 0.13
TRIM13-202ENST00000378182 NAP1L3Q99457 506 aaPredicted RBP15.88■□□□□ 0.13
TRIM13-202ENST00000378182 ZRANB1Q9UGI0 708 aa15.88■□□□□ 0.13
TRIM13-202ENST00000378182 GOLGA6L9A6NEM1 432 aa15.88■□□□□ 0.13
TRIM13-202ENST00000378182 NIM1KQ8IY84 436 aa15.88■□□□□ 0.13
TRIM13-202ENST00000378182 ZFYP08048 801 aaPredicted RBP15.88■□□□□ 0.13
TRIM13-202ENST00000378182 SH2D4AQ9H788 454 aa15.88■□□□□ 0.13
TRIM13-202ENST00000378182 STK25O00506 426 aa15.87■□□□□ 0.13
TRIM13-202ENST00000378182 DNAJC21Q5F1R6 531 aaKnown RBP15.87■□□□□ 0.13
TRIM13-202ENST00000378182 TNPO1Q92973 898 aaKnown RBP15.87■□□□□ 0.13
TRIM13-202ENST00000378182 RNASE9P60153 205 aaKnown RBP15.87■□□□□ 0.13
TRIM13-202ENST00000378182 DAAM2Q86T65 1068 aa15.87■□□□□ 0.13
TRIM13-202ENST00000378182 DDX17Q92841 729 aaKnown RBP15.87■□□□□ 0.13
TRIM13-202ENST00000378182 VWA3AA6NCI4 1184 aa15.87■□□□□ 0.13
TRIM13-202ENST00000378182 SMTNP53814 917 aa15.87■□□□□ 0.13
TRIM13-202ENST00000378182 TBC1D31Q96DN5 1066 aa15.87■□□□□ 0.13
TRIM13-202ENST00000378182 CTAGE1Q96RT6 745 aa15.87■□□□□ 0.13
TRIM13-202ENST00000378182 USTQ9Y2C2 406 aa15.87■□□□□ 0.13
TRIM13-202ENST00000378182 RAD51AP2Q09MP3 1159 aa15.87■□□□□ 0.13
TRIM13-202ENST00000378182 CTNND2Q9UQB3 1225 aa15.87■□□□□ 0.13
TRIM13-202ENST00000378182 EPB41P11171 864 aaKnown RBP15.87■□□□□ 0.13
TRIM13-202ENST00000378182 PRPHP41219 470 aa15.87■□□□□ 0.13
TRIM13-202ENST00000378182 SMC6Q96SB8 1091 aa15.87■□□□□ 0.13
TRIM13-202ENST00000378182 BICC1Q9H694 974 aaKnown RBP15.87■□□□□ 0.13
TRIM13-202ENST00000378182 TRIM7Q9C029 511 aa15.86■□□□□ 0.13
TRIM13-202ENST00000378182 AZI2Q9H6S1 392 aa15.86■□□□□ 0.13
TRIM13-202ENST00000378182 FAM204AQ9H8W3 233 aa15.86■□□□□ 0.13
TRIM13-202ENST00000378182 USP21Q9UK80 565 aa15.86■□□□□ 0.13
TRIM13-202ENST00000378182 KARSQ15046 597 aaKnown RBP15.86■□□□□ 0.13
TRIM13-202ENST00000378182 LEO1Q8WVC0 666 aaPredicted RBP15.86■□□□□ 0.13
TRIM13-202ENST00000378182 AKAP4Q5JQC9 854 aa15.86■□□□□ 0.13
TRIM13-202ENST00000378182 TLDC2A0PJX2 215 aa15.86■□□□□ 0.13
TRIM13-202ENST00000378182 ZBED4O75132 1171 aa15.86■□□□□ 0.13
TRIM13-202ENST00000378182 ATP2A2P16615 1042 aaKnown RBP15.86■□□□□ 0.13
TRIM13-202ENST00000378182 TTC22Q5TAA0 569 aa15.86■□□□□ 0.13
TRIM13-202ENST00000378182 SEC62Q99442 399 aaKnown RBP15.86■□□□□ 0.13
TRIM13-202ENST00000378182 ZSCAN16Q9H4T2 348 aaPredicted RBP15.86■□□□□ 0.13
TRIM13-202ENST00000378182 H7C1D1 291 aa15.86■□□□□ 0.13
TRIM13-202ENST00000378182 FAM89AQ96GI7 184 aa15.86■□□□□ 0.13
TRIM13-202ENST00000378182 EHBP1Q8NDI1 1231 aa15.86■□□□□ 0.13
TRIM13-202ENST00000378182 MAGI1Q96QZ7 1491 aaPredicted RBP15.86■□□□□ 0.13
TRIM13-202ENST00000378182 TAF5LO75529 589 aa15.85■□□□□ 0.13
TRIM13-202ENST00000378182 GNA11P29992 359 aa15.85■□□□□ 0.13
TRIM13-202ENST00000378182 IL15P40933 162 aaPredicted RBP15.85■□□□□ 0.13
TRIM13-202ENST00000378182 PRPF6O94906 941 aaKnown RBP15.85■□□□□ 0.13
TRIM13-202ENST00000378182 GNAT2P19087 354 aa15.85■□□□□ 0.13
TRIM13-202ENST00000378182 TRIM75PA6NK02 468 aa15.85■□□□□ 0.13
TRIM13-202ENST00000378182 ESPNB1AK53 854 aa15.85■□□□□ 0.13
TRIM13-202ENST00000378182 MBD4O95243 580 aa15.85■□□□□ 0.13
TRIM13-202ENST00000378182 CALML3P27482 149 aa15.85■□□□□ 0.13
TRIM13-202ENST00000378182 SESTD1Q86VW0 696 aa15.85■□□□□ 0.13
TRIM13-202ENST00000378182 CCDC77Q9BR77 488 aa15.85■□□□□ 0.13
TRIM13-202ENST00000378182 RIOK1Q9BRS2 568 aaKnown RBP15.85■□□□□ 0.13
TRIM13-202ENST00000378182 ARMT1Q9H993 441 aa15.85■□□□□ 0.13
TRIM13-202ENST00000378182 CCDC87Q9NVE4 849 aa15.85■□□□□ 0.13
TRIM13-202ENST00000378182 GUCA1BQ9UMX6 200 aa15.85■□□□□ 0.13
TRIM13-202ENST00000378182 POTEB2H3BUK9 544 aa15.85■□□□□ 0.13
TRIM13-202ENST00000378182 TTC30AQ86WT1 665 aa15.85■□□□□ 0.13
TRIM13-202ENST00000378182 UBLCP1Q8WVY7 318 aaPredicted RBP15.85■□□□□ 0.13
TRIM13-202ENST00000378182 NSRP1Q9H0G5 558 aaKnown RBP15.85■□□□□ 0.13
TRIM13-202ENST00000378182 KIAA1524Q8TCG1 905 aa15.85■□□□□ 0.13
TRIM13-202ENST00000378182 KIFAP3Q92845 792 aa15.85■□□□□ 0.13
TRIM13-202ENST00000378182 SPC25Q9HBM1 224 aa15.85■□□□□ 0.13
TRIM13-202ENST00000378182 CDAN1Q8IWY9 1227 aa15.84■□□□□ 0.13
TRIM13-202ENST00000378182 PPIP5K2O43314 1243 aa15.84■□□□□ 0.13
TRIM13-202ENST00000378182 MKRN3Q13064 507 aaKnown RBP15.84■□□□□ 0.13
TRIM13-202ENST00000378182 CASC4Q6P4E1 433 aa15.84■□□□□ 0.13
TRIM13-202ENST00000378182 SYNJ1O43426 1573 aa15.84■□□□□ 0.13
TRIM13-202ENST00000378182 LMBR1Q8WVP7 490 aa15.84■□□□□ 0.13
TRIM13-202ENST00000378182 IQGAP2Q13576 1575 aa15.84■□□□□ 0.13
TRIM13-202ENST00000378182 TOPBP1Q92547 1522 aa15.84■□□□□ 0.13
TRIM13-202ENST00000378182 RTL1A6NKG5 1358 aa15.84■□□□□ 0.13
TRIM13-202ENST00000378182 TACC1O75410 805 aa15.84■□□□□ 0.13
TRIM13-202ENST00000378182 MAPK8IP1Q9UQF2 711 aa15.84■□□□□ 0.13
TRIM13-202ENST00000378182 UBE2HP62256 183 aa15.84■□□□□ 0.13
TRIM13-202ENST00000378182 MCM6Q14566 821 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms