RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 ATP5JP18859 108 aa16.17■□□□□ 0.18
CKAP2-202ENST00000378034 CRKP46108 304 aa16.17■□□□□ 0.18
CKAP2-202ENST00000378034 C1QTNF8P60827 252 aa16.17■□□□□ 0.18
CKAP2-202ENST00000378034 HHIPL2Q6UWX4 724 aa16.17■□□□□ 0.18
CKAP2-202ENST00000378034 ERICH6Q7L0X2 663 aa16.17■□□□□ 0.18
CKAP2-202ENST00000378034 TEKT1Q969V4 418 aa16.17■□□□□ 0.18
CKAP2-202ENST00000378034 GPATCH3Q96I76 525 aa16.17■□□□□ 0.18
CKAP2-202ENST00000378034 ABCF2Q9UG63 623 aa16.17■□□□□ 0.18
CKAP2-202ENST00000378034 PITPNM2Q9BZ72 1349 aa16.16■□□□□ 0.18
CKAP2-202ENST00000378034 ECM29Q5VYK3 1845 aa16.16■□□□□ 0.18
CKAP2-202ENST00000378034 PRDX5P30044 214 aa16.16■□□□□ 0.18
CKAP2-202ENST00000378034 PI16Q6UXB8 463 aa16.16■□□□□ 0.18
CKAP2-202ENST00000378034 SLF2Q8IX21 1173 aa16.16■□□□□ 0.18
CKAP2-202ENST00000378034 CNTROBQ8N137 903 aa16.16■□□□□ 0.18
CKAP2-202ENST00000378034 DCPSQ96C86 337 aaKnown RBP16.16■□□□□ 0.18
CKAP2-202ENST00000378034 BCL11AQ9H165 835 aa16.16■□□□□ 0.18
CKAP2-202ENST00000378034 SPDYE2BA6NHP3 402 aa16.15■□□□□ 0.18
CKAP2-202ENST00000378034 MYO1BO43795 1136 aa16.15■□□□□ 0.18
CKAP2-202ENST00000378034 SPDYE6P0CI01 402 aa16.15■□□□□ 0.18
CKAP2-202ENST00000378034 ZAP70P43403 619 aa16.15■□□□□ 0.18
CKAP2-202ENST00000378034 RBM5P52756 815 aaKnown RBP eCLIP16.15■□□□□ 0.18
CKAP2-202ENST00000378034 NBPF9Q3BBW0 867 aa16.15■□□□□ 0.18
CKAP2-202ENST00000378034 MAP1SQ66K74 1059 aaPredicted RBP16.15■□□□□ 0.18
CKAP2-202ENST00000378034 ZDHHC15Q96MV8 337 aa16.15■□□□□ 0.18
CKAP2-202ENST00000378034 SNRKQ9NRH2 765 aa16.15■□□□□ 0.18
CKAP2-202ENST00000378034 ECHDC1Q9NTX5 307 aa16.15■□□□□ 0.18
CKAP2-202ENST00000378034 CYP2E1P05181 493 aaPredicted RBP16.15■□□□□ 0.18
CKAP2-202ENST00000378034 CDC37L1Q7L3B6 337 aa16.15■□□□□ 0.18
CKAP2-202ENST00000378034 ITGBL1O95965 494 aaPredicted RBP16.14■□□□□ 0.17
CKAP2-202ENST00000378034 GSTO1P78417 241 aa16.14■□□□□ 0.17
CKAP2-202ENST00000378034 TTF1Q15361 905 aaPredicted RBP16.14■□□□□ 0.17
CKAP2-202ENST00000378034 TMED8Q6PL24 325 aaPredicted RBP16.14■□□□□ 0.17
CKAP2-202ENST00000378034 DZIP1Q86YF9 867 aaKnown RBP16.14■□□□□ 0.17
CKAP2-202ENST00000378034 PRMT6Q96LA8 375 aaPredicted RBP16.14■□□□□ 0.17
CKAP2-202ENST00000378034 GGA3Q9NZ52 723 aa16.14■□□□□ 0.17
CKAP2-202ENST00000378034 LRP2BPQ9P2M1 347 aa16.14■□□□□ 0.17
CKAP2-202ENST00000378034 TTC41PQ6P2S7 1318 aa16.14■□□□□ 0.17
CKAP2-202ENST00000378034 ANGEL2Q5VTE6 544 aaKnown RBP16.13■□□□□ 0.17
CKAP2-202ENST00000378034 TBC1D9Q6ZT07 1266 aa16.13■□□□□ 0.17
CKAP2-202ENST00000378034 FAM163AQ96GL9 167 aaPredicted RBP16.13■□□□□ 0.17
CKAP2-202ENST00000378034 LDHCP07864 332 aa16.13■□□□□ 0.17
CKAP2-202ENST00000378034 NUCB1Q02818 461 aa16.13■□□□□ 0.17
CKAP2-202ENST00000378034 APOBEC3FQ8IUX4 373 aaKnown RBP16.13■□□□□ 0.17
CKAP2-202ENST00000378034 SULF1Q8IWU6 871 aa16.13■□□□□ 0.17
CKAP2-202ENST00000378034 HAUS7Q99871 368 aa16.13■□□□□ 0.17
CKAP2-202ENST00000378034 RAI14Q9P0K7 980 aa16.13■□□□□ 0.17
CKAP2-202ENST00000378034 MAST2Q6P0Q8 1798 aa16.12■□□□□ 0.17
CKAP2-202ENST00000378034 PASKQ96RG2 1323 aa16.12■□□□□ 0.17
CKAP2-202ENST00000378034 POLR2AP24928 1970 aaKnown RBP16.12■□□□□ 0.17
CKAP2-202ENST00000378034 MYH2Q9UKX2 1941 aa16.12■□□□□ 0.17
CKAP2-202ENST00000378034 MECOMQ03112 1051 aa16.12■□□□□ 0.17
CKAP2-202ENST00000378034 KRT26Q7Z3Y9 468 aa16.12■□□□□ 0.17
CKAP2-202ENST00000378034 CHD1LQ86WJ1 897 aa16.12■□□□□ 0.17
CKAP2-202ENST00000378034 NSUN4Q96CB9 384 aaKnown RBP16.12■□□□□ 0.17
CKAP2-202ENST00000378034 DOCK2Q92608 1830 aa16.11■□□□□ 0.17
CKAP2-202ENST00000378034 GAKO14976 1311 aa16.11■□□□□ 0.17
CKAP2-202ENST00000378034 ASTN2O75129 1339 aaPredicted RBP16.11■□□□□ 0.17
CKAP2-202ENST00000378034 ERC2O15083 957 aa16.11■□□□□ 0.17
CKAP2-202ENST00000378034 SPDYE2Q495Y8 402 aa16.11■□□□□ 0.17
CKAP2-202ENST00000378034 DAGLAQ9Y4D2 1042 aa16.11■□□□□ 0.17
CKAP2-202ENST00000378034 PCDHAC2Q9Y5I4 1007 aa16.11■□□□□ 0.17
CKAP2-202ENST00000378034 SALL3Q9BXA9 1300 aa16.11■□□□□ 0.17
CKAP2-202ENST00000378034 MX1P20591 662 aa16.11■□□□□ 0.17
CKAP2-202ENST00000378034 DIXDC1Q155Q3 683 aa16.11■□□□□ 0.17
CKAP2-202ENST00000378034 ERICH6BQ5W0A0 696 aa16.11■□□□□ 0.17
CKAP2-202ENST00000378034 B4GALNT3Q6L9W6 998 aa16.11■□□□□ 0.17
CKAP2-202ENST00000378034 APOBEC3HQ6NTF7 200 aaKnown RBP16.11■□□□□ 0.17
CKAP2-202ENST00000378034 BOLA2Q9H3K6 86 aa16.11■□□□□ 0.17
CKAP2-202ENST00000378034 PIH1D3Q9NQM4 214 aaKnown RBP16.11■□□□□ 0.17
CKAP2-202ENST00000378034 MROH7-TTC4A0A0A0MT08 1334 aa16.1■□□□□ 0.17
CKAP2-202ENST00000378034 MAP3K12Q12852 859 aa16.1■□□□□ 0.17
CKAP2-202ENST00000378034 USP48Q86UV5 1035 aa16.1■□□□□ 0.17
CKAP2-202ENST00000378034 DNAJC2Q99543 621 aaKnown RBP16.1■□□□□ 0.17
CKAP2-202ENST00000378034 GLIS2Q9BZE0 524 aaPredicted RBP16.1■□□□□ 0.17
CKAP2-202ENST00000378034 PAG1Q9NWQ8 432 aa16.1■□□□□ 0.17
CKAP2-202ENST00000378034 ZNF70Q9UC06 446 aaPredicted RBP16.1■□□□□ 0.17
CKAP2-202ENST00000378034 STAP2Q9UGK3 403 aa16.1■□□□□ 0.17
CKAP2-202ENST00000378034 GLRX3O76003 335 aaKnown RBP16.09■□□□□ 0.17
CKAP2-202ENST00000378034 TNFAIP1Q13829 316 aa16.09■□□□□ 0.17
CKAP2-202ENST00000378034 LNPKQ9C0E8 428 aa16.09■□□□□ 0.17
CKAP2-202ENST00000378034 TDRD3Q9H7E2 651 aaKnown RBP16.09■□□□□ 0.17
CKAP2-202ENST00000378034 PPP2R3BQ9Y5P8 575 aa16.09■□□□□ 0.17
CKAP2-202ENST00000378034 MYO5AQ9Y4I1 1855 aaKnown RBP16.09■□□□□ 0.17
CKAP2-202ENST00000378034 GOLIM4O00461 696 aa16.09■□□□□ 0.17
CKAP2-202ENST00000378034 MAP4K4O95819 1239 aaPredicted RBP16.09■□□□□ 0.17
CKAP2-202ENST00000378034 FKBP1CQ5VVH2 108 aa16.09■□□□□ 0.17
CKAP2-202ENST00000378034 NAA16Q6N069 864 aaPredicted RBP16.09■□□□□ 0.17
CKAP2-202ENST00000378034 ZNF384Q8TF68 577 aa16.09■□□□□ 0.17
CKAP2-202ENST00000378034 ANTXR1Q9H6X2 564 aa16.09■□□□□ 0.17
CKAP2-202ENST00000378034 TMOD2Q9NZR1 351 aa16.09■□□□□ 0.17
CKAP2-202ENST00000378034 NDUFB9Q9Y6M9 179 aa16.09■□□□□ 0.17
CKAP2-202ENST00000378034 TRPM7Q96QT4 1865 aa16.08■□□□□ 0.17
CKAP2-202ENST00000378034 GPR75-ASB3A0A0A6YYF3 556 aa16.08■□□□□ 0.16
CKAP2-202ENST00000378034 IDH1O75874 414 aaKnown RBP16.08■□□□□ 0.16
CKAP2-202ENST00000378034 APLP1P51693 650 aa16.08■□□□□ 0.16
CKAP2-202ENST00000378034 OTUD7AQ8TE49 926 aaPredicted RBP16.08■□□□□ 0.16
CKAP2-202ENST00000378034 CLRN2A0PK11 232 aa16.07■□□□□ 0.16
CKAP2-202ENST00000378034 ADM5C9JUS6 153 aa16.07■□□□□ 0.16
CKAP2-202ENST00000378034 HSPA6P17066 643 aa16.07■□□□□ 0.16
CKAP2-202ENST00000378034 PDE1AP54750 535 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms