RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 YEATS4O95619 227 aa20.86■□□□□ 0.93
GNE-201ENST00000377902 CSB-PGBD3P0DP91 1061 aa20.86■□□□□ 0.93
GNE-201ENST00000377902 IL15P40933 162 aaPredicted RBP20.86■□□□□ 0.93
GNE-201ENST00000377902 EVCP57679 992 aa20.86■□□□□ 0.93
GNE-201ENST00000377902 ANKLE2Q86XL3 938 aa20.86■□□□□ 0.93
GNE-201ENST00000377902 SCN11AQ9UI33 1791 aa20.86■□□□□ 0.93
GNE-201ENST00000377902 CLCN6P51797 869 aa20.86■□□□□ 0.93
GNE-201ENST00000377902 KIF23Q02241 960 aaPredicted RBP20.86■□□□□ 0.93
GNE-201ENST00000377902 CABLES1Q8TDN4 633 aa20.86■□□□□ 0.93
GNE-201ENST00000377902 FER1L4A9Z1Z3 1794 aa20.85■□□□□ 0.93
GNE-201ENST00000377902 H2AFXP16104 143 aaPredicted RBP20.85■□□□□ 0.93
GNE-201ENST00000377902 CHRNA2Q15822 529 aa20.85■□□□□ 0.93
GNE-201ENST00000377902 ARHGAP29Q52LW3 1261 aa20.85■□□□□ 0.93
GNE-201ENST00000377902 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.85■□□□□ 0.93
GNE-201ENST00000377902 PSDA5PKW4 1024 aaPredicted RBP20.85■□□□□ 0.93
GNE-201ENST00000377902 TMEM232C9JQI7 657 aa20.85■□□□□ 0.93
GNE-201ENST00000377902 A1BGP04217 495 aa20.85■□□□□ 0.93
GNE-201ENST00000377902 CABP4P57796 275 aa20.85■□□□□ 0.93
GNE-201ENST00000377902 PNOCQ13519 176 aa20.85■□□□□ 0.93
GNE-201ENST00000377902 IMMTQ16891 758 aaKnown RBP20.85■□□□□ 0.93
GNE-201ENST00000377902 MB21D2Q8IYB1 491 aaPredicted RBP20.85■□□□□ 0.93
GNE-201ENST00000377902 A0A0U1RQG5 324 aaPredicted RBP20.84■□□□□ 0.93
GNE-201ENST00000377902 KIF2AO00139 706 aaPredicted RBP20.84■□□□□ 0.93
GNE-201ENST00000377902 FAM177A1Q8N128 213 aaPredicted RBP20.84■□□□□ 0.93
GNE-201ENST00000377902 CLIC6Q96NY7 704 aa20.84■□□□□ 0.93
GNE-201ENST00000377902 EPC1Q9H2F5 836 aa20.84■□□□□ 0.93
GNE-201ENST00000377902 CWC25Q9NXE8 425 aaPredicted RBP20.84■□□□□ 0.93
GNE-201ENST00000377902 UTP14AQ9BVJ6 771 aaKnown RBP20.84■□□□□ 0.93
GNE-201ENST00000377902 NWD2Q9ULI1 1742 aa20.84■□□□□ 0.93
GNE-201ENST00000377902 CAMTA1Q9Y6Y1 1673 aa20.83■□□□□ 0.93
GNE-201ENST00000377902 UBE2Q2LH0YL09 131 aa20.83■□□□□ 0.93
GNE-201ENST00000377902 CMA1P23946 247 aa20.83■□□□□ 0.93
GNE-201ENST00000377902 TMX1Q9H3N1 280 aa20.83■□□□□ 0.93
GNE-201ENST00000377902 FHOD1Q9Y613 1164 aa20.83■□□□□ 0.93
GNE-201ENST00000377902 UBASH3AP57075 661 aa20.83■□□□□ 0.92
GNE-201ENST00000377902 SHC4Q6S5L8 630 aa20.83■□□□□ 0.92
GNE-201ENST00000377902 DCAF5Q96JK2 942 aa20.83■□□□□ 0.92
GNE-201ENST00000377902 SENP2Q9HC62 589 aa20.83■□□□□ 0.92
GNE-201ENST00000377902 ZBTB22O15209 634 aa20.82■□□□□ 0.92
GNE-201ENST00000377902 SERPINC1P01008 464 aa20.82■□□□□ 0.92
GNE-201ENST00000377902 ZAP70P43403 619 aa20.82■□□□□ 0.92
GNE-201ENST00000377902 SYKP43405 635 aa20.82■□□□□ 0.92
GNE-201ENST00000377902 PHKBQ93100 1093 aa20.82■□□□□ 0.92
GNE-201ENST00000377902 GPR108Q9NPR9 543 aa20.82■□□□□ 0.92
GNE-201ENST00000377902 TPM4P67936 248 aa20.82■□□□□ 0.92
GNE-201ENST00000377902 CFAP100Q494V2 611 aa20.82■□□□□ 0.92
GNE-201ENST00000377902 TRIM65Q6PJ69 517 aa20.82■□□□□ 0.92
GNE-201ENST00000377902 BRAPQ7Z569 592 aa20.82■□□□□ 0.92
GNE-201ENST00000377902 XAGE2Q96GT9 111 aa20.82■□□□□ 0.92
GNE-201ENST00000377902 ETF1P62495 437 aaKnown RBP20.81■□□□□ 0.92
GNE-201ENST00000377902 TTC39AQ5SRH9 613 aa20.81■□□□□ 0.92
GNE-201ENST00000377902 FBXL16Q8N461 479 aa20.81■□□□□ 0.92
GNE-201ENST00000377902 SLC39A14Q15043 492 aa20.81■□□□□ 0.92
GNE-201ENST00000377902 SPECC1Q5M775 1068 aa20.81■□□□□ 0.92
GNE-201ENST00000377902 FOXP4Q8IVH2 680 aaPredicted RBP20.81■□□□□ 0.92
GNE-201ENST00000377902 DHX16O60231 1041 aaKnown RBP20.8■□□□□ 0.92
GNE-201ENST00000377902 URI1O94763 535 aaPredicted RBP20.8■□□□□ 0.92
GNE-201ENST00000377902 RALYLQ86SE5 291 aaKnown RBP20.8■□□□□ 0.92
GNE-201ENST00000377902 NCOA7Q8NI08 942 aa20.8■□□□□ 0.92
GNE-201ENST00000377902 FANCLQ9NW38 375 aa20.8■□□□□ 0.92
GNE-201ENST00000377902 CEP126Q9P2H0 1117 aa20.8■□□□□ 0.92
GNE-201ENST00000377902 FOXN1O15353 648 aa20.8■□□□□ 0.92
GNE-201ENST00000377902 VPS37DQ86XT2 251 aa20.8■□□□□ 0.92
GNE-201ENST00000377902 NBPF3Q9H094 633 aa20.8■□□□□ 0.92
GNE-201ENST00000377902 ZNF213O14771 459 aa20.79■□□□□ 0.92
GNE-201ENST00000377902 CDC27P30260 824 aa20.79■□□□□ 0.92
GNE-201ENST00000377902 ALG1Q9BT22 464 aa20.79■□□□□ 0.92
GNE-201ENST00000377902 INCENPQ9NQS7 918 aa20.79■□□□□ 0.92
GNE-201ENST00000377902 SEC31AO94979 1220 aaKnown RBP20.79■□□□□ 0.92
GNE-201ENST00000377902 LONRF3Q496Y0 759 aa20.79■□□□□ 0.92
GNE-201ENST00000377902 CCDC158Q5M9N0 1113 aa20.79■□□□□ 0.92
GNE-201ENST00000377902 REXO1L1PQ8IX06 675 aa20.79■□□□□ 0.92
GNE-201ENST00000377902 IKBKBO14920 756 aa20.78■□□□□ 0.92
GNE-201ENST00000377902 GPAA1O43292 621 aa20.78■□□□□ 0.92
GNE-201ENST00000377902 PNMA6AP0CW24 399 aaPredicted RBP20.78■□□□□ 0.92
GNE-201ENST00000377902 PLA2G4AP47712 749 aa20.78■□□□□ 0.92
GNE-201ENST00000377902 PDE4BQ07343 736 aa20.78■□□□□ 0.92
GNE-201ENST00000377902 BMS1Q14692 1282 aaKnown RBP20.78■□□□□ 0.92
GNE-201ENST00000377902 CYB5R4Q7L1T6 521 aa20.78■□□□□ 0.92
GNE-201ENST00000377902 MYL10Q9BUA6 226 aa20.78■□□□□ 0.92
GNE-201ENST00000377902 CARD6Q9BX69 1037 aa20.78■□□□□ 0.92
GNE-201ENST00000377902 ZNF330Q9Y3S2 320 aaPredicted RBP20.78■□□□□ 0.92
GNE-201ENST00000377902 TUBE1Q9UJT0 475 aa20.78■□□□□ 0.92
GNE-201ENST00000377902 BMP6P22004 513 aa20.77■□□□□ 0.92
GNE-201ENST00000377902 KRT40Q6A162 431 aa20.77■□□□□ 0.92
GNE-201ENST00000377902 METTL16Q86W50 562 aaKnown RBP20.77■□□□□ 0.92
GNE-201ENST00000377902 STK11IPQ8N1F8 1099 aa20.77■□□□□ 0.92
GNE-201ENST00000377902 UBXN4Q92575 508 aa20.77■□□□□ 0.92
GNE-201ENST00000377902 INTS13Q9NVM9 706 aa20.77■□□□□ 0.92
GNE-201ENST00000377902 MYL5Q02045 173 aa20.77■□□□□ 0.91
GNE-201ENST00000377902 PTPAQ15257 358 aa20.77■□□□□ 0.91
GNE-201ENST00000377902 NOL10Q9BSC4 688 aaKnown RBP20.77■□□□□ 0.91
GNE-201ENST00000377902 HPSEQ9Y251 543 aa20.77■□□□□ 0.91
GNE-201ENST00000377902 NRDCO43847 1150 aa20.76■□□□□ 0.91
GNE-201ENST00000377902 KCNJ6P48051 423 aa20.76■□□□□ 0.91
GNE-201ENST00000377902 MICU3Q86XE3 530 aa20.76■□□□□ 0.91
GNE-201ENST00000377902 TBC1D10CQ8IV04 446 aa20.76■□□□□ 0.91
GNE-201ENST00000377902 GNL2Q13823 731 aaKnown RBP20.76■□□□□ 0.91
GNE-201ENST00000377902 CHMP4CQ96CF2 233 aa20.76■□□□□ 0.91
GNE-201ENST00000377902 PCDHA5Q9Y5H7 936 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms