RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 FKBP1BP68106 108 aa14.31□□□□□ -0.12
SMARCE1-203ENST00000377808 GORABQ5T7V8 394 aa14.31□□□□□ -0.12
SMARCE1-203ENST00000377808 WDR66Q8TBY9 1149 aa14.31□□□□□ -0.12
SMARCE1-203ENST00000377808 TEKT1Q969V4 418 aa14.31□□□□□ -0.12
SMARCE1-203ENST00000377808 TDRD3Q9H7E2 651 aaKnown RBP14.31□□□□□ -0.12
SMARCE1-203ENST00000377808 PAPPA2Q9BXP8 1791 aa14.31□□□□□ -0.12
SMARCE1-203ENST00000377808 MAST3O60307 1309 aa14.31□□□□□ -0.12
SMARCE1-203ENST00000377808 AOX1Q06278 1338 aa14.31□□□□□ -0.12
SMARCE1-203ENST00000377808 ZBTB7BO15156 539 aaPredicted RBP14.3□□□□□ -0.12
SMARCE1-203ENST00000377808 NOGQ13253 232 aa14.3□□□□□ -0.12
SMARCE1-203ENST00000377808 COL13A1Q5TAT6 717 aaPredicted RBP14.3□□□□□ -0.12
SMARCE1-203ENST00000377808 CCDC102BQ68D86 513 aa14.3□□□□□ -0.12
SMARCE1-203ENST00000377808 ARMC9Q7Z3E5 817 aa14.3□□□□□ -0.12
SMARCE1-203ENST00000377808 CCDC102AQ96A19 550 aa14.3□□□□□ -0.12
SMARCE1-203ENST00000377808 YTHDC1Q96MU7 727 aaKnown RBP14.3□□□□□ -0.12
SMARCE1-203ENST00000377808 ZNF70Q9UC06 446 aaPredicted RBP14.3□□□□□ -0.12
SMARCE1-203ENST00000377808 DENND2AQ9ULE3 1009 aa14.3□□□□□ -0.12
SMARCE1-203ENST00000377808 COL1A1P02452 1464 aaPredicted RBP14.3□□□□□ -0.12
SMARCE1-203ENST00000377808 ECM29Q5VYK3 1845 aa14.29□□□□□ -0.12
SMARCE1-203ENST00000377808 THSD7BQ9C0I4 1608 aa14.29□□□□□ -0.12
SMARCE1-203ENST00000377808 TCP10L2B9ZVM9 353 aa14.29□□□□□ -0.12
SMARCE1-203ENST00000377808 SURF6O75683 361 aaKnown RBP14.29□□□□□ -0.12
SMARCE1-203ENST00000377808 ATP8B2P98198 1209 aa14.29□□□□□ -0.12
SMARCE1-203ENST00000377808 TNFAIP1Q13829 316 aa14.29□□□□□ -0.12
SMARCE1-203ENST00000377808 MVPQ14764 893 aaKnown RBP14.29□□□□□ -0.12
SMARCE1-203ENST00000377808 SPDYE2Q495Y8 402 aa14.29□□□□□ -0.12
SMARCE1-203ENST00000377808 XAGE2Q96GT9 111 aa14.29□□□□□ -0.12
SMARCE1-203ENST00000377808 TMOD2Q9NZR1 351 aa14.29□□□□□ -0.12
SMARCE1-203ENST00000377808 TSKSQ9UJT2 592 aa14.29□□□□□ -0.12
SMARCE1-203ENST00000377808 ANGEL1Q9UNK9 670 aaKnown RBP14.29□□□□□ -0.12
SMARCE1-203ENST00000377808 FZD1Q9UP38 647 aa14.29□□□□□ -0.12
SMARCE1-203ENST00000377808 PPP2R3BQ9Y5P8 575 aa14.29□□□□□ -0.12
SMARCE1-203ENST00000377808 LDHBP07195 334 aaKnown RBP14.28□□□□□ -0.12
SMARCE1-203ENST00000377808 SLC10A3P09131 477 aa14.28□□□□□ -0.12
SMARCE1-203ENST00000377808 LBX1P52954 281 aa14.28□□□□□ -0.12
SMARCE1-203ENST00000377808 MKRN3Q13064 507 aaKnown RBP14.28□□□□□ -0.12
SMARCE1-203ENST00000377808 RASA3Q14644 834 aa14.28□□□□□ -0.12
SMARCE1-203ENST00000377808 RASAL3Q86YV0 1011 aa14.28□□□□□ -0.12
SMARCE1-203ENST00000377808 ZIC5Q96T25 663 aa14.28□□□□□ -0.12
SMARCE1-203ENST00000377808 COG6Q9Y2V7 657 aa14.28□□□□□ -0.12
SMARCE1-203ENST00000377808 SUGT1Q9Y2Z0 365 aa14.28□□□□□ -0.12
SMARCE1-203ENST00000377808 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.28□□□□□ -0.12
SMARCE1-203ENST00000377808 FAM155AB1AL88 458 aaPredicted RBP14.27□□□□□ -0.12
SMARCE1-203ENST00000377808 SEMA3EO15041 775 aa14.27□□□□□ -0.12
SMARCE1-203ENST00000377808 PRDX5P30044 214 aa14.27□□□□□ -0.12
SMARCE1-203ENST00000377808 TNNI2P48788 182 aa14.27□□□□□ -0.12
SMARCE1-203ENST00000377808 CACNB3P54284 484 aa14.27□□□□□ -0.12
SMARCE1-203ENST00000377808 KIF23Q02241 960 aaPredicted RBP14.27□□□□□ -0.12
SMARCE1-203ENST00000377808 POLA2Q14181 598 aa14.27□□□□□ -0.12
SMARCE1-203ENST00000377808 SUPT20HL1Q3ZLR7 823 aa14.27□□□□□ -0.12
SMARCE1-203ENST00000377808 SSH3Q8TE77 659 aa14.27□□□□□ -0.12
SMARCE1-203ENST00000377808 ABCF2Q9UG63 623 aa14.27□□□□□ -0.12
SMARCE1-203ENST00000377808 PPP1R12BO60237 982 aaPredicted RBP14.26□□□□□ -0.13
SMARCE1-203ENST00000377808 HSPA8P11142 646 aaKnown RBP14.26□□□□□ -0.13
SMARCE1-203ENST00000377808 HDLBPQ00341 1268 aaKnown RBP14.26□□□□□ -0.13
SMARCE1-203ENST00000377808 RASGRF1Q13972 1273 aa14.26□□□□□ -0.13
SMARCE1-203ENST00000377808 DIXDC1Q155Q3 683 aa14.26□□□□□ -0.13
SMARCE1-203ENST00000377808 NBPF12Q5TAG4 269 aaPredicted RBP14.26□□□□□ -0.13
SMARCE1-203ENST00000377808 CEP85Q6P2H3 762 aa14.26□□□□□ -0.13
SMARCE1-203ENST00000377808 DZIP1Q86YF9 867 aaKnown RBP14.26□□□□□ -0.13
SMARCE1-203ENST00000377808 TNS4Q8IZW8 715 aa14.26□□□□□ -0.13
SMARCE1-203ENST00000377808 ZGPATQ8N5A5 531 aaKnown RBP14.26□□□□□ -0.13
SMARCE1-203ENST00000377808 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.26□□□□□ -0.13
SMARCE1-203ENST00000377808 ZDHHC15Q96MV8 337 aa14.26□□□□□ -0.13
SMARCE1-203ENST00000377808 DDX19BQ9UMR2 479 aa14.26□□□□□ -0.13
SMARCE1-203ENST00000377808 TMEM39BQ9GZU3 492 aa14.25□□□□□ -0.13
SMARCE1-203ENST00000377808 IREB2P48200 963 aaKnown RBP14.24□□□□□ -0.13
SMARCE1-203ENST00000377808 TNNI3KQ59H18 835 aa14.24□□□□□ -0.13
SMARCE1-203ENST00000377808 TTC39AQ5SRH9 613 aa14.24□□□□□ -0.13
SMARCE1-203ENST00000377808 HHIPL2Q6UWX4 724 aa14.24□□□□□ -0.13
SMARCE1-203ENST00000377808 BCL11AQ9H165 835 aa14.24□□□□□ -0.13
SMARCE1-203ENST00000377808 DAGLAQ9Y4D2 1042 aa14.24□□□□□ -0.13
SMARCE1-203ENST00000377808 FPGT-TNNI3KV9GXZ4 949 aa14.24□□□□□ -0.13
SMARCE1-203ENST00000377808 SSC5DA1L4H1 1573 aa14.24□□□□□ -0.13
SMARCE1-203ENST00000377808 CA12O43570 354 aa14.23□□□□□ -0.13
SMARCE1-203ENST00000377808 APOBEC3HQ6NTF7 200 aaKnown RBP14.23□□□□□ -0.13
SMARCE1-203ENST00000377808 CDAN1Q8IWY9 1227 aa14.23□□□□□ -0.13
SMARCE1-203ENST00000377808 SPATA5Q8NB90 893 aa14.23□□□□□ -0.13
SMARCE1-203ENST00000377808 MRIQ9BWK5 157 aa14.23□□□□□ -0.13
SMARCE1-203ENST00000377808 PRDM10Q9NQV6 1147 aa14.23□□□□□ -0.13
SMARCE1-203ENST00000377808 SALL1Q9NSC2 1324 aa14.23□□□□□ -0.13
SMARCE1-203ENST00000377808 EXOC6BQ9Y2D4 811 aa14.23□□□□□ -0.13
SMARCE1-203ENST00000377808 APBB1O00213 710 aa14.22□□□□□ -0.13
SMARCE1-203ENST00000377808 CCDC158Q5M9N0 1113 aa14.22□□□□□ -0.13
SMARCE1-203ENST00000377808 C20orf194Q5TEA3 1177 aa14.22□□□□□ -0.13
SMARCE1-203ENST00000377808 SPTY2D1Q68D10 685 aaPredicted RBP14.22□□□□□ -0.13
SMARCE1-203ENST00000377808 PI16Q6UXB8 463 aa14.22□□□□□ -0.13
SMARCE1-203ENST00000377808 ERICH6Q7L0X2 663 aa14.22□□□□□ -0.13
SMARCE1-203ENST00000377808 SLC10A4Q96EP9 437 aa14.22□□□□□ -0.13
SMARCE1-203ENST00000377808 DBNDD2Q9BQY9 259 aa14.22□□□□□ -0.13
SMARCE1-203ENST00000377808 CHMP4BQ9H444 224 aaKnown RBP14.22□□□□□ -0.13
SMARCE1-203ENST00000377808 UQCRFS1P1P0C7P4 283 aa14.21□□□□□ -0.13
SMARCE1-203ENST00000377808 TCP10Q12799 353 aa14.21□□□□□ -0.13
SMARCE1-203ENST00000377808 IFFO2Q5TF58 517 aa14.21□□□□□ -0.13
SMARCE1-203ENST00000377808 SLF2Q8IX21 1173 aa14.21□□□□□ -0.13
SMARCE1-203ENST00000377808 CLMNQ96JQ2 1002 aa14.21□□□□□ -0.13
SMARCE1-203ENST00000377808 CSRNP1Q96S65 589 aa14.21□□□□□ -0.13
SMARCE1-203ENST00000377808 CCDC8Q9H0W5 538 aaPredicted RBP14.21□□□□□ -0.13
SMARCE1-203ENST00000377808 USP40Q9NVE5 1235 aa14.21□□□□□ -0.13
SMARCE1-203ENST00000377808 RAI14Q9P0K7 980 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms