RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 NBPF10Q6P3W6 841 aaKnown RBP13.33□□□□□ -0.28
SEC23B-204ENST00000377475 TMCO3Q6UWJ1 677 aa13.33□□□□□ -0.28
SEC23B-204ENST00000377475 NBPF15Q8N660 670 aa13.33□□□□□ -0.28
SEC23B-204ENST00000377475 PPP1R13BQ96KQ4 1090 aa13.33□□□□□ -0.28
SEC23B-204ENST00000377475 REREQ9P2R6 1566 aa13.33□□□□□ -0.28
SEC23B-204ENST00000377475 MED23Q9ULK4 1368 aa13.33□□□□□ -0.28
SEC23B-204ENST00000377475 WDHD1O75717 1129 aaPredicted RBP13.33□□□□□ -0.28
SEC23B-204ENST00000377475 AKAP17AQ02040 695 aaKnown RBP13.33□□□□□ -0.28
SEC23B-204ENST00000377475 SAFBQ15424 915 aaKnown RBP eCLIP13.33□□□□□ -0.28
SEC23B-204ENST00000377475 NAA16Q6N069 864 aaPredicted RBP13.33□□□□□ -0.28
SEC23B-204ENST00000377475 ARMCX5Q6P1M9 558 aa13.33□□□□□ -0.28
SEC23B-204ENST00000377475 NAPBQ9H115 298 aa13.33□□□□□ -0.28
SEC23B-204ENST00000377475 TRMT112Q9UI30 125 aaKnown RBP13.33□□□□□ -0.28
SEC23B-204ENST00000377475 NPHP4O75161 1426 aaPredicted RBP13.33□□□□□ -0.28
SEC23B-204ENST00000377475 USP42Q9H9J4 1324 aaKnown RBP13.33□□□□□ -0.28
SEC23B-204ENST00000377475 CCZ1BP86790 482 aa13.32□□□□□ -0.28
SEC23B-204ENST00000377475 CCZ1P86791 482 aaPredicted RBP13.32□□□□□ -0.28
SEC23B-204ENST00000377475 PPARDQ03181 441 aa13.32□□□□□ -0.28
SEC23B-204ENST00000377475 SMYD4Q8IYR2 804 aaPredicted RBP13.32□□□□□ -0.28
SEC23B-204ENST00000377475 PLBD2Q8NHP8 589 aa13.32□□□□□ -0.28
SEC23B-204ENST00000377475 KCNG4Q8TDN1 519 aa13.32□□□□□ -0.28
SEC23B-204ENST00000377475 IRX2Q9BZI1 471 aaPredicted RBP13.32□□□□□ -0.28
SEC23B-204ENST00000377475 SLC12A7Q9Y666 1083 aa13.32□□□□□ -0.28
SEC23B-204ENST00000377475 BTBD18B2RXH4 712 aa13.32□□□□□ -0.28
SEC23B-204ENST00000377475 POLR2DO15514 142 aaKnown RBP13.32□□□□□ -0.28
SEC23B-204ENST00000377475 MCM6Q14566 821 aa13.32□□□□□ -0.28
SEC23B-204ENST00000377475 ADALQ6DHV7 355 aa13.32□□□□□ -0.28
SEC23B-204ENST00000377475 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.32□□□□□ -0.28
SEC23B-204ENST00000377475 FBXO18Q8NFZ0 1043 aa13.32□□□□□ -0.28
SEC23B-204ENST00000377475 ZBTB43O43298 467 aa13.32□□□□□ -0.28
SEC23B-204ENST00000377475 RFX5P48382 616 aaPredicted RBP13.32□□□□□ -0.28
SEC23B-204ENST00000377475 ILDR1Q86SU0 546 aaPredicted RBP13.32□□□□□ -0.28
SEC23B-204ENST00000377475 DHX58Q96C10 678 aa13.32□□□□□ -0.28
SEC23B-204ENST00000377475 MRFAP1L1Q96HT8 127 aa13.32□□□□□ -0.28
SEC23B-204ENST00000377475 NOL10Q9BSC4 688 aaKnown RBP13.32□□□□□ -0.28
SEC23B-204ENST00000377475 ERBB3P21860 1342 aa13.31□□□□□ -0.28
SEC23B-204ENST00000377475 GSDMDP57764 484 aa13.31□□□□□ -0.28
SEC23B-204ENST00000377475 ZMYM1Q5SVZ6 1142 aa13.31□□□□□ -0.28
SEC23B-204ENST00000377475 E4F1Q66K89 784 aaPredicted RBP13.31□□□□□ -0.28
SEC23B-204ENST00000377475 FMR1NBQ8N0W7 255 aaPredicted RBP13.31□□□□□ -0.28
SEC23B-204ENST00000377475 NEK11Q8NG66 645 aa13.31□□□□□ -0.28
SEC23B-204ENST00000377475 ARMT1Q9H993 441 aa13.31□□□□□ -0.28
SEC23B-204ENST00000377475 ATG9AQ7Z3C6 839 aa13.31□□□□□ -0.28
SEC23B-204ENST00000377475 CCDC12Q8WUD4 166 aaPredicted RBP13.31□□□□□ -0.28
SEC23B-204ENST00000377475 ANKRD7Q92527 254 aa13.31□□□□□ -0.28
SEC23B-204ENST00000377475 PLIN2Q99541 437 aa13.31□□□□□ -0.28
SEC23B-204ENST00000377475 GTPBP4Q9BZE4 634 aaKnown RBP13.31□□□□□ -0.28
SEC23B-204ENST00000377475 PCDHA5Q9Y5H7 936 aa13.31□□□□□ -0.28
SEC23B-204ENST00000377475 CCDC102BQ68D86 513 aa13.3□□□□□ -0.28
SEC23B-204ENST00000377475 KIF6Q6ZMV9 814 aa13.3□□□□□ -0.28
SEC23B-204ENST00000377475 DNAJC10Q8IXB1 793 aa13.3□□□□□ -0.28
SEC23B-204ENST00000377475 HELLSQ9NRZ9 838 aa13.3□□□□□ -0.28
SEC23B-204ENST00000377475 ERCC3P19447 782 aa13.3□□□□□ -0.28
SEC23B-204ENST00000377475 NR5A1Q13285 461 aa13.3□□□□□ -0.28
SEC23B-204ENST00000377475 DHX8Q14562 1220 aaKnown RBP13.3□□□□□ -0.28
SEC23B-204ENST00000377475 BICDL1Q6ZP65 573 aa13.3□□□□□ -0.28
SEC23B-204ENST00000377475 LRP2BPQ9P2M1 347 aa13.3□□□□□ -0.28
SEC23B-204ENST00000377475 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.3□□□□□ -0.28
SEC23B-204ENST00000377475 ERICH2A1L162 156 aa13.3□□□□□ -0.28
SEC23B-204ENST00000377475 PRKAB2O43741 272 aa13.3□□□□□ -0.28
SEC23B-204ENST00000377475 EVCP57679 992 aa13.3□□□□□ -0.28
SEC23B-204ENST00000377475 LRRFIP1Q32MZ4 808 aaKnown RBP13.3□□□□□ -0.28
SEC23B-204ENST00000377475 FKBP15Q5T1M5 1219 aa13.3□□□□□ -0.28
SEC23B-204ENST00000377475 MAGEB6Q8N7X4 407 aa13.3□□□□□ -0.28
SEC23B-204ENST00000377475 ERO1AQ96HE7 468 aa13.3□□□□□ -0.28
SEC23B-204ENST00000377475 DCAF5Q96JK2 942 aa13.3□□□□□ -0.28
SEC23B-204ENST00000377475 GDAP1L1Q96MZ0 367 aa13.3□□□□□ -0.28
SEC23B-204ENST00000377475 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.3□□□□□ -0.281e-6■■■■□ 20.5
SEC23B-204ENST00000377475 ARGLU1Q9NWB6 273 aaPredicted RBP13.3□□□□□ -0.28
SEC23B-204ENST00000377475 CCT6AP40227 531 aaKnown RBP13.29□□□□□ -0.28
SEC23B-204ENST00000377475 GRIN1Q05586 938 aa13.29□□□□□ -0.28
SEC23B-204ENST00000377475 NKX2-3Q8TAU0 364 aa13.29□□□□□ -0.28
SEC23B-204ENST00000377475 FEZ1Q99689 392 aa13.29□□□□□ -0.28
SEC23B-204ENST00000377475 CABP5Q9NP86 173 aa13.29□□□□□ -0.28
SEC23B-204ENST00000377475 NEMFO60524 1076 aa13.29□□□□□ -0.28
SEC23B-204ENST00000377475 JMYQ8N9B5 988 aa13.29□□□□□ -0.28
SEC23B-204ENST00000377475 SMARCC2Q8TAQ2 1214 aa13.29□□□□□ -0.28
SEC23B-204ENST00000377475 LLPHQ9BRT6 129 aaKnown RBP13.29□□□□□ -0.28
SEC23B-204ENST00000377475 NFE2L3Q9Y4A8 694 aa13.29□□□□□ -0.28
SEC23B-204ENST00000377475 ITSN1Q15811 1721 aa13.29□□□□□ -0.28
SEC23B-204ENST00000377475 ZNF532Q9HCE3 1301 aa13.29□□□□□ -0.28
SEC23B-204ENST00000377475 RANBP6O60518 1105 aaKnown RBP13.29□□□□□ -0.28
SEC23B-204ENST00000377475 ITGA6P23229 1130 aa13.29□□□□□ -0.28
SEC23B-204ENST00000377475 CDC27P30260 824 aa13.29□□□□□ -0.28
SEC23B-204ENST00000377475 CASQ1P31415 396 aa13.29□□□□□ -0.28
SEC23B-204ENST00000377475 GREM2Q9H772 168 aa13.29□□□□□ -0.28
SEC23B-204ENST00000377475 KCNH3Q9ULD8 1083 aa13.29□□□□□ -0.28
SEC23B-204ENST00000377475 KIF13AQ9H1H9 1805 aa13.28□□□□□ -0.28
SEC23B-204ENST00000377475 CTIFO43310 598 aaKnown RBP13.28□□□□□ -0.28
SEC23B-204ENST00000377475 MBD4O95243 580 aa13.28□□□□□ -0.28
SEC23B-204ENST00000377475 RHOXF2BP0C7M4 288 aa13.28□□□□□ -0.28
SEC23B-204ENST00000377475 PHKA1P46020 1223 aa13.28□□□□□ -0.28
SEC23B-204ENST00000377475 FOXO4P98177 505 aa13.28□□□□□ -0.28
SEC23B-204ENST00000377475 MYL5Q02045 173 aa13.28□□□□□ -0.28
SEC23B-204ENST00000377475 CYB5R4Q7L1T6 521 aa13.28□□□□□ -0.28
SEC23B-204ENST00000377475 CCDC24Q8N4L8 307 aa13.28□□□□□ -0.28
SEC23B-204ENST00000377475 KCNB2Q92953 911 aa13.28□□□□□ -0.28
SEC23B-204ENST00000377475 RHOXF2Q9BQY4 288 aa13.28□□□□□ -0.28
SEC23B-204ENST00000377475 DSCC1Q9BVC3 393 aa13.28□□□□□ -0.28
SEC23B-204ENST00000377475 WWC3Q9ULE0 1092 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms