RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 CCDC102AQ96A19 550 aa27.26■■□□□ 1.95
SRM-201ENST00000376957 PRMT6Q96LA8 375 aaPredicted RBP27.26■■□□□ 1.95
SRM-201ENST00000376957 VEZTQ9HBM0 779 aa27.26■■□□□ 1.95
SRM-201ENST00000376957 ZBTB22O15209 634 aa27.25■■□□□ 1.95
SRM-201ENST00000376957 XAGE2Q96GT9 111 aa27.25■■□□□ 1.95
SRM-201ENST00000376957 DEFB129Q9H1M3 183 aa27.25■■□□□ 1.95
SRM-201ENST00000376957 COG6Q9Y2V7 657 aa27.25■■□□□ 1.95
SRM-201ENST00000376957 ECM29Q5VYK3 1845 aa27.25■■□□□ 1.95
SRM-201ENST00000376957 HMMRO75330 724 aa27.24■■□□□ 1.95
SRM-201ENST00000376957 HSPA1AP0DMV8 641 aaKnown RBP27.24■■□□□ 1.95
SRM-201ENST00000376957 HSPA1BP0DMV9 641 aaKnown RBP27.24■■□□□ 1.95
SRM-201ENST00000376957 TNNI2P48788 182 aa27.24■■□□□ 1.95
SRM-201ENST00000376957 HSP90AB4PQ58FF6 505 aa27.24■■□□□ 1.95
SRM-201ENST00000376957 RGMBQ6NW40 437 aa27.24■■□□□ 1.95
SRM-201ENST00000376957 TMOD2Q9NZR1 351 aa27.24■■□□□ 1.95
SRM-201ENST00000376957 LDHBP07195 334 aaKnown RBP27.23■■□□□ 1.95
SRM-201ENST00000376957 PHKA1P46020 1223 aa27.23■■□□□ 1.95
SRM-201ENST00000376957 SUPT20HL1Q3ZLR7 823 aa27.23■■□□□ 1.95
SRM-201ENST00000376957 CEP85Q6P2H3 762 aa27.23■■□□□ 1.95
SRM-201ENST00000376957 ERC1Q8IUD2 1116 aa27.23■■□□□ 1.95
SRM-201ENST00000376957 RPAP2Q8IXW5 612 aaPredicted RBP27.23■■□□□ 1.95
SRM-201ENST00000376957 YTHDC1Q96MU7 727 aaKnown RBP27.23■■□□□ 1.95
SRM-201ENST00000376957 GPR108Q9NPR9 543 aa27.23■■□□□ 1.95
SRM-201ENST00000376957 SCAF8Q9UPN6 1271 aaKnown RBP27.23■■□□□ 1.95
SRM-201ENST00000376957 CLRN2A0PK11 232 aa27.22■■□□□ 1.95
SRM-201ENST00000376957 ADORA1P30542 326 aa27.22■■□□□ 1.95
SRM-201ENST00000376957 ZNF157P51786 506 aaPredicted RBP27.22■■□□□ 1.95
SRM-201ENST00000376957 NOGQ13253 232 aa27.22■■□□□ 1.95
SRM-201ENST00000376957 SPTY2D1Q68D10 685 aaPredicted RBP27.22■■□□□ 1.95
SRM-201ENST00000376957 ARMC9Q7Z3E5 817 aa27.22■■□□□ 1.95
SRM-201ENST00000376957 NOP58Q9Y2X3 529 aaKnown RBP27.22■■□□□ 1.95
SRM-201ENST00000376957 PDS5AQ29RF7 1337 aaKnown RBP27.21■■□□□ 1.95
SRM-201ENST00000376957 SALL1Q9NSC2 1324 aa27.21■■□□□ 1.95
SRM-201ENST00000376957 HHIPL2Q6UWX4 724 aa27.21■■□□□ 1.95
SRM-201ENST00000376957 SLF2Q8IX21 1173 aa27.21■■□□□ 1.95
SRM-201ENST00000376957 ZDHHC15Q96MV8 337 aa27.21■■□□□ 1.95
SRM-201ENST00000376957 SPDYE2Q495Y8 402 aa27.2■■□□□ 1.94
SRM-201ENST00000376957 CCDC158Q5M9N0 1113 aa27.2■■□□□ 1.94
SRM-201ENST00000376957 PRAMEF18Q5VWM3 479 aa27.2■■□□□ 1.94
SRM-201ENST00000376957 TDRD3Q9H7E2 651 aaKnown RBP27.2■■□□□ 1.94
SRM-201ENST00000376957 ZNF70Q9UC06 446 aaPredicted RBP27.2■■□□□ 1.94
SRM-201ENST00000376957 PAPPA2Q9BXP8 1791 aa27.2■■□□□ 1.94
SRM-201ENST00000376957 PPP1R12BO60237 982 aaPredicted RBP27.19■■□□□ 1.94
SRM-201ENST00000376957 UQCRFS1P1P0C7P4 283 aa27.19■■□□□ 1.94
SRM-201ENST00000376957 PCDHAC2Q9Y5I4 1007 aa27.19■■□□□ 1.94
SRM-201ENST00000376957 ZBTB40Q9NUA8 1239 aa27.18■■□□□ 1.94
SRM-201ENST00000376957 RASGRF1Q13972 1273 aa27.17■■□□□ 1.94
SRM-201ENST00000376957 TNNI3KQ59H18 835 aa27.17■■□□□ 1.94
SRM-201ENST00000376957 WBP1LQ9NX94 342 aa27.17■■□□□ 1.94
SRM-201ENST00000376957 ABCF2Q9UG63 623 aa27.17■■□□□ 1.94
SRM-201ENST00000376957 FPGT-TNNI3KV9GXZ4 949 aa27.17■■□□□ 1.94
SRM-201ENST00000376957 RASA3Q14644 834 aa27.16■■□□□ 1.94
SRM-201ENST00000376957 GRIK5Q16478 980 aa27.16■■□□□ 1.94
SRM-201ENST00000376957 DZIP1Q86YF9 867 aaKnown RBP27.16■■□□□ 1.94
SRM-201ENST00000376957 REM2Q8IYK8 340 aaPredicted RBP27.15■■□□□ 1.94
SRM-201ENST00000376957 HOOK2Q96ED9 719 aa27.15■■□□□ 1.94
SRM-201ENST00000376957 CA12O43570 354 aa27.14■■□□□ 1.94
SRM-201ENST00000376957 PRDX5P30044 214 aa27.14■■□□□ 1.94
SRM-201ENST00000376957 CTCFP49711 727 aaPredicted RBP27.14■■□□□ 1.94
SRM-201ENST00000376957 TTC39AQ5SRH9 613 aa27.14■■□□□ 1.94
SRM-201ENST00000376957 SPATA5Q8NB90 893 aa27.14■■□□□ 1.94
SRM-201ENST00000376957 TCP10L2B9ZVM9 353 aa27.13■■□□□ 1.93
SRM-201ENST00000376957 AOC2O75106 756 aa27.13■■□□□ 1.93
SRM-201ENST00000376957 ARID4AP29374 1257 aaPredicted RBP27.13■■□□□ 1.93
SRM-201ENST00000376957 FKBP1CQ5VVH2 108 aa27.13■■□□□ 1.93
SRM-201ENST00000376957 ERICH6Q7L0X2 663 aa27.13■■□□□ 1.93
SRM-201ENST00000376957 ANGEL1Q9UNK9 670 aaKnown RBP27.13■■□□□ 1.93
SRM-201ENST00000376957 UNCXA6NJT0 531 aa27.12■■□□□ 1.93
SRM-201ENST00000376957 UBE2Q2LH0YL09 131 aa27.12■■□□□ 1.93
SRM-201ENST00000376957 IREB2P48200 963 aaKnown RBP27.12■■□□□ 1.93
SRM-201ENST00000376957 PRKG1Q13976 671 aa27.12■■□□□ 1.93
SRM-201ENST00000376957 EXOC6BQ9Y2D4 811 aa27.12■■□□□ 1.93
SRM-201ENST00000376957 SLC10A3P09131 477 aa27.11■■□□□ 1.93
SRM-201ENST00000376957 GSTO1P78417 241 aa27.11■■□□□ 1.93
SRM-201ENST00000376957 APOBEC3HQ6NTF7 200 aaKnown RBP27.11■■□□□ 1.93
SRM-201ENST00000376957 THSD7BQ9C0I4 1608 aa27.1■■□□□ 1.93
SRM-201ENST00000376957 FAM83AQ86UY5 434 aa27.1■■□□□ 1.93
SRM-201ENST00000376957 HMG20BQ9P0W2 317 aa27.1■■□□□ 1.93
SRM-201ENST00000376957 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.1■■□□□ 1.93
SRM-201ENST00000376957 RAB11FIP3O75154 756 aa27.09■■□□□ 1.93
SRM-201ENST00000376957 LDHCP07864 332 aa27.09■■□□□ 1.93
SRM-201ENST00000376957 MOB2Q70IA6 237 aa27.09■■□□□ 1.93
SRM-201ENST00000376957 CLASRPQ8N2M8 674 aaKnown RBP27.09■■□□□ 1.93
SRM-201ENST00000376957 KIF1BPQ96EK5 621 aa27.09■■□□□ 1.93
SRM-201ENST00000376957 LRP2BPQ9P2M1 347 aa27.09■■□□□ 1.93
SRM-201ENST00000376957 DAGLAQ9Y4D2 1042 aa27.09■■□□□ 1.93
SRM-201ENST00000376957 FAM155AB1AL88 458 aaPredicted RBP27.08■■□□□ 1.93
SRM-201ENST00000376957 FOXN1O15353 648 aa27.08■■□□□ 1.93
SRM-201ENST00000376957 IGSF3O75054 1194 aa27.08■■□□□ 1.93
SRM-201ENST00000376957 DIXDC1Q155Q3 683 aa27.08■■□□□ 1.93
SRM-201ENST00000376957 MAP3K11Q16584 847 aa27.08■■□□□ 1.93
SRM-201ENST00000376957 NBPF12Q5TAG4 269 aaPredicted RBP27.08■■□□□ 1.93
SRM-201ENST00000376957 C20orf194Q5TEA3 1177 aa27.08■■□□□ 1.93
SRM-201ENST00000376957 ZNF512BQ96KM6 892 aaPredicted RBP27.08■■□□□ 1.93
SRM-201ENST00000376957 DBNDD2Q9BQY9 259 aa27.08■■□□□ 1.93
SRM-201ENST00000376957 SLC10A4Q96EP9 437 aa27.07■■□□□ 1.92
SRM-201ENST00000376957 RAI14Q9P0K7 980 aa27.07■■□□□ 1.92
SRM-201ENST00000376957 KIF23Q02241 960 aaPredicted RBP27.06■■□□□ 1.92
SRM-201ENST00000376957 AACSQ86V21 672 aa27.06■■□□□ 1.92
SRM-201ENST00000376957 RASAL3Q86YV0 1011 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms