RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 COL4A1P02462 1669 aa17.61■□□□□ 0.41
CCHCR1-201ENST00000376266 C10orf71Q711Q0 1435 aa17.61■□□□□ 0.41
CCHCR1-201ENST00000376266 TAF1P21675 1872 aa17.6■□□□□ 0.41
CCHCR1-201ENST00000376266 LIG1P18858 919 aa17.6■□□□□ 0.41
CCHCR1-201ENST00000376266 CHRNA5P30532 468 aa17.6■□□□□ 0.41
CCHCR1-201ENST00000376266 PLCD3Q8N3E9 789 aa17.6■□□□□ 0.41
CCHCR1-201ENST00000376266 CELF1Q92879 486 aaKnown RBP17.6■□□□□ 0.41
CCHCR1-201ENST00000376266 COPRSQ9NQ92 184 aa17.6■□□□□ 0.41
CCHCR1-201ENST00000376266 RTL9Q8NET4 1388 aa17.6■□□□□ 0.41
CCHCR1-201ENST00000376266 SRGNP10124 158 aa17.6■□□□□ 0.41
CCHCR1-201ENST00000376266 PUS3Q9BZE2 481 aaKnown RBP17.6■□□□□ 0.41
CCHCR1-201ENST00000376266 LARGE1O95461 756 aa17.59■□□□□ 0.41
CCHCR1-201ENST00000376266 MAP4K4O95819 1239 aaPredicted RBP17.59■□□□□ 0.41
CCHCR1-201ENST00000376266 PTPN14Q15678 1187 aa17.59■□□□□ 0.41
CCHCR1-201ENST00000376266 FBXO38Q6PIJ6 1188 aa17.59■□□□□ 0.41
CCHCR1-201ENST00000376266 C2CD5Q86YS7 1000 aa17.59■□□□□ 0.41
CCHCR1-201ENST00000376266 RASEFQ8IZ41 740 aa17.59■□□□□ 0.41
CCHCR1-201ENST00000376266 RAD50Q92878 1312 aa17.59■□□□□ 0.41
CCHCR1-201ENST00000376266 CPA1P15085 419 aa17.59■□□□□ 0.41
CCHCR1-201ENST00000376266 KRT85P78386 507 aa17.59■□□□□ 0.41
CCHCR1-201ENST00000376266 LRRC24Q50LG9 513 aa17.59■□□□□ 0.41
CCHCR1-201ENST00000376266 TTC6Q86TZ1 520 aa17.59■□□□□ 0.41
CCHCR1-201ENST00000376266 FAM53CQ9NYF3 392 aa17.59■□□□□ 0.41
CCHCR1-201ENST00000376266 CCDC171Q6TFL3 1326 aa17.58■□□□□ 0.41
CCHCR1-201ENST00000376266 GOLGA6L4A6NEF3 574 aa17.58■□□□□ 0.41
CCHCR1-201ENST00000376266 H0YIN7 160 aa17.58■□□□□ 0.41
CCHCR1-201ENST00000376266 LDHAL6AQ6ZMR3 332 aa17.58■□□□□ 0.41
CCHCR1-201ENST00000376266 CASTP20810 708 aaKnown RBP17.58■□□□□ 0.4
CCHCR1-201ENST00000376266 OS9Q13438 667 aaPredicted RBP17.58■□□□□ 0.4
CCHCR1-201ENST00000376266 ELF2Q15723 593 aa17.58■□□□□ 0.4
CCHCR1-201ENST00000376266 CCDC144BQ3MJ40 725 aa17.58■□□□□ 0.4
CCHCR1-201ENST00000376266 CCDC144CPQ8IYA2 1237 aa17.58■□□□□ 0.4
CCHCR1-201ENST00000376266 RBM17Q96I25 401 aaKnown RBP17.58■□□□□ 0.4
CCHCR1-201ENST00000376266 CDC5LQ99459 802 aaKnown RBP17.58■□□□□ 0.4
CCHCR1-201ENST00000376266 ST7Q9NRC1 585 aa17.58■□□□□ 0.4
CCHCR1-201ENST00000376266 DACT1Q9NYF0 836 aa17.58■□□□□ 0.4
CCHCR1-201ENST00000376266 HOXA10P31260 410 aaPredicted RBP17.57■□□□□ 0.4
CCHCR1-201ENST00000376266 FAM193AP78312 1265 aa17.57■□□□□ 0.4
CCHCR1-201ENST00000376266 SLC20A2Q08357 652 aa17.57■□□□□ 0.4
CCHCR1-201ENST00000376266 G3BP1Q13283 466 aaKnown RBP eCLIP17.57■□□□□ 0.4
CCHCR1-201ENST00000376266 ANKRD18AQ8IVF6 992 aa17.57■□□□□ 0.4
CCHCR1-201ENST00000376266 TDRD7Q8NHU6 1098 aaKnown RBP17.57■□□□□ 0.4
CCHCR1-201ENST00000376266 ZNF622Q969S3 477 aaKnown RBP eCLIP17.57■□□□□ 0.43e-6■■□□□ 13.3
CCHCR1-201ENST00000376266 ERO1AQ96HE7 468 aa17.57■□□□□ 0.4
CCHCR1-201ENST00000376266 SGSM2O43147 1006 aa17.57■□□□□ 0.4
CCHCR1-201ENST00000376266 RPS8P62241 208 aaKnown RBP17.57■□□□□ 0.4
CCHCR1-201ENST00000376266 MPHOSPH8Q99549 860 aa17.57■□□□□ 0.4
CCHCR1-201ENST00000376266 COL11A2P13942 1736 aaPredicted RBP17.57■□□□□ 0.4
CCHCR1-201ENST00000376266 A0A0G2JLW4 131 aa17.56■□□□□ 0.4
CCHCR1-201ENST00000376266 EYA2O00167 538 aa17.56■□□□□ 0.4
CCHCR1-201ENST00000376266 NPR1P16066 1061 aa17.56■□□□□ 0.4
CCHCR1-201ENST00000376266 IGHMBP2P38935 993 aaKnown RBP17.56■□□□□ 0.4
CCHCR1-201ENST00000376266 ZNF165P49910 485 aa17.56■□□□□ 0.4
CCHCR1-201ENST00000376266 ATG9AQ7Z3C6 839 aa17.56■□□□□ 0.4
CCHCR1-201ENST00000376266 MASTLQ96GX5 879 aa17.56■□□□□ 0.4
CCHCR1-201ENST00000376266 CNNM1Q9NRU3 951 aa17.56■□□□□ 0.4
CCHCR1-201ENST00000376266 USP27XA6NNY8 438 aa17.56■□□□□ 0.4
CCHCR1-201ENST00000376266 GRAPQ13588 217 aa17.56■□□□□ 0.4
CCHCR1-201ENST00000376266 SLC51AQ86UW1 340 aa17.56■□□□□ 0.4
CCHCR1-201ENST00000376266 GRAPLQ8TC17 118 aaPredicted RBP17.56■□□□□ 0.4
CCHCR1-201ENST00000376266 NOL10Q9BSC4 688 aaKnown RBP17.56■□□□□ 0.4
CCHCR1-201ENST00000376266 IL1RAPL2Q9NP60 686 aa17.56■□□□□ 0.4
CCHCR1-201ENST00000376266 TULP2O00295 520 aa17.55■□□□□ 0.4
CCHCR1-201ENST00000376266 FERMT3Q86UX7 667 aa17.55■□□□□ 0.4
CCHCR1-201ENST00000376266 CREBRFQ8IUR6 639 aa17.55■□□□□ 0.4
CCHCR1-201ENST00000376266 LRRC8AQ8IWT6 810 aa17.55■□□□□ 0.4
CCHCR1-201ENST00000376266 LSG1Q9H089 658 aaKnown RBP17.55■□□□□ 0.4
CCHCR1-201ENST00000376266 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.55■□□□□ 0.4
CCHCR1-201ENST00000376266 AOX1Q06278 1338 aa17.55■□□□□ 0.4
CCHCR1-201ENST00000376266 UTRNP46939 3433 aa17.55■□□□□ 0.4
CCHCR1-201ENST00000376266 SASH1O94885 1247 aa17.55■□□□□ 0.4
CCHCR1-201ENST00000376266 DPEP1P16444 411 aa17.55■□□□□ 0.4
CCHCR1-201ENST00000376266 CAPN2P17655 700 aa17.55■□□□□ 0.4
CCHCR1-201ENST00000376266 ZSCAN31Q96LW9 406 aaPredicted RBP17.55■□□□□ 0.4
CCHCR1-201ENST00000376266 CRAMP1Q96RY5 1269 aa17.55■□□□□ 0.4
CCHCR1-201ENST00000376266 PDRG1Q9NUG6 133 aa17.55■□□□□ 0.4
CCHCR1-201ENST00000376266 RIPOR2Q9Y4F9 1068 aa17.55■□□□□ 0.4
CCHCR1-201ENST00000376266 SLFNL1Q499Z3 407 aa17.54■□□□□ 0.4
CCHCR1-201ENST00000376266 LARP1BQ659C4 914 aaKnown RBP17.54■□□□□ 0.4
CCHCR1-201ENST00000376266 TRERF1Q96PN7 1200 aa17.54■□□□□ 0.4
CCHCR1-201ENST00000376266 DNAJC25Q9H1X3 360 aa17.54■□□□□ 0.4
CCHCR1-201ENST00000376266 SLU7O95391 586 aaKnown RBP17.54■□□□□ 0.4
CCHCR1-201ENST00000376266 BMS1Q14692 1282 aaKnown RBP17.54■□□□□ 0.4
CCHCR1-201ENST00000376266 HSP90AB4PQ58FF6 505 aa17.54■□□□□ 0.4
CCHCR1-201ENST00000376266 FAM173BQ6P4H8 233 aa17.54■□□□□ 0.4
CCHCR1-201ENST00000376266 BSDC1Q9NW68 430 aaPredicted RBP17.54■□□□□ 0.4
CCHCR1-201ENST00000376266 NEMFO60524 1076 aa17.53■□□□□ 0.4
CCHCR1-201ENST00000376266 CIAO1O76071 339 aa17.53■□□□□ 0.4
CCHCR1-201ENST00000376266 PDIA4P13667 645 aaKnown RBP17.53■□□□□ 0.4
CCHCR1-201ENST00000376266 KCNA3P22001 575 aa17.53■□□□□ 0.4
CCHCR1-201ENST00000376266 SH2B1Q9NRF2 756 aaPredicted RBP17.53■□□□□ 0.4
CCHCR1-201ENST00000376266 DDX19AQ9NUU7 478 aaKnown RBP17.53■□□□□ 0.4
CCHCR1-201ENST00000376266 WWC3Q9ULE0 1092 aa17.53■□□□□ 0.4
CCHCR1-201ENST00000376266 CD2APQ9Y5K6 639 aa17.53■□□□□ 0.4
CCHCR1-201ENST00000376266 SPEF2Q9C093 1822 aa17.53■□□□□ 0.4
CCHCR1-201ENST00000376266 KIF13BQ9NQT8 1826 aa17.53■□□□□ 0.4
CCHCR1-201ENST00000376266 ELP1O95163 1332 aa17.53■□□□□ 0.4
CCHCR1-201ENST00000376266 SKILP12757 684 aa17.53■□□□□ 0.4
CCHCR1-201ENST00000376266 CDC25BP30305 580 aa17.53■□□□□ 0.4
CCHCR1-201ENST00000376266 ALDH1B1P30837 517 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms