RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 NAA16Q6N069 864 aaPredicted RBP27.62■■■□□ 2.01
HLA-C-202ENST00000376237 SLF2Q8IX21 1173 aa27.62■■■□□ 2.01
HLA-C-202ENST00000376237 ESYT1Q9BSJ8 1104 aa27.62■■■□□ 2.01
HLA-C-202ENST00000376237 MAST3O60307 1309 aa27.62■■■□□ 2.01
HLA-C-202ENST00000376237 ZNF532Q9HCE3 1301 aa27.62■■■□□ 2.01
HLA-C-202ENST00000376237 TCRBV5S4A2TA0A5A2 114 aa27.62■■■□□ 2.01
HLA-C-202ENST00000376237 CXCL9Q07325 125 aa27.62■■■□□ 2.01
HLA-C-202ENST00000376237 RSBN1LQ6PCB5 846 aaPredicted RBP27.62■■■□□ 2.01
HLA-C-202ENST00000376237 CERS5Q8N5B7 392 aa27.62■■■□□ 2.01
HLA-C-202ENST00000376237 BACH2Q9BYV9 841 aa27.62■■■□□ 2.01
HLA-C-202ENST00000376237 PSMD14O00487 310 aa27.61■■■□□ 2.01
HLA-C-202ENST00000376237 LDHCP07864 332 aa27.61■■■□□ 2.01
HLA-C-202ENST00000376237 MCMDC2Q4G0Z9 681 aa27.61■■■□□ 2.01
HLA-C-202ENST00000376237 FAM227BQ96M60 508 aa27.61■■■□□ 2.01
HLA-C-202ENST00000376237 SGSM2O43147 1006 aa27.6■■■□□ 2.01
HLA-C-202ENST00000376237 CYP7A1P22680 504 aa27.6■■■□□ 2.01
HLA-C-202ENST00000376237 SCN9AQ15858 1988 aa27.59■■■□□ 2.01
HLA-C-202ENST00000376237 A0A0D9SFI3 127 aa27.59■■■□□ 2.01
HLA-C-202ENST00000376237 MFAP1P55081 439 aaKnown RBP27.59■■■□□ 2.01
HLA-C-202ENST00000376237 GRIK5Q16478 980 aa27.59■■■□□ 2.01
HLA-C-202ENST00000376237 AGBL3Q8NEM8 1001 aa27.59■■■□□ 2.01
HLA-C-202ENST00000376237 MRIQ9BWK5 157 aa27.59■■■□□ 2.01
HLA-C-202ENST00000376237 RNF181Q9P0P0 153 aa27.59■■■□□ 2.01
HLA-C-202ENST00000376237 CHGBP05060 677 aa27.58■■■□□ 2.01
HLA-C-202ENST00000376237 OSBP2Q969R2 916 aa27.58■■■□□ 2.01
HLA-C-202ENST00000376237 FAM163AQ96GL9 167 aaPredicted RBP27.58■■■□□ 2.01
HLA-C-202ENST00000376237 MXD3Q9BW11 206 aa27.58■■■□□ 2.01
HLA-C-202ENST00000376237 TTF2Q9UNY4 1162 aaKnown RBP27.58■■■□□ 2.01
HLA-C-202ENST00000376237 DCAF8L1A6NGE4 600 aa27.57■■■□□ 2
HLA-C-202ENST00000376237 HDLBPQ00341 1268 aaKnown RBP27.57■■■□□ 2
HLA-C-202ENST00000376237 ZNF384Q8TF68 577 aa27.57■■■□□ 2
HLA-C-202ENST00000376237 REC8O95072 547 aa27.57■■■□□ 2
HLA-C-202ENST00000376237 MMP14P50281 582 aa27.57■■■□□ 2
HLA-C-202ENST00000376237 PSME4Q14997 1843 aa27.56■■■□□ 2
HLA-C-202ENST00000376237 RPS12P25398 132 aaKnown RBP27.56■■■□□ 2
HLA-C-202ENST00000376237 SLFNL1Q499Z3 407 aa27.56■■■□□ 2
HLA-C-202ENST00000376237 C9orf131Q5VYM1 1079 aa27.56■■■□□ 2
HLA-C-202ENST00000376237 GMLQ99445 158 aa27.56■■■□□ 2
HLA-C-202ENST00000376237 PUS7LQ9H0K6 701 aaKnown RBP27.56■■■□□ 2
HLA-C-202ENST00000376237 KIAA1211Q6ZU35 1233 aa27.55■■■□□ 2
HLA-C-202ENST00000376237 CERS3Q8IU89 383 aa27.55■■■□□ 2
HLA-C-202ENST00000376237 KIAA0825Q8IV33 1275 aa27.55■■■□□ 2
HLA-C-202ENST00000376237 SEC62Q99442 399 aaKnown RBP27.55■■■□□ 2
HLA-C-202ENST00000376237 MYO5AQ9Y4I1 1855 aaKnown RBP27.55■■■□□ 2
HLA-C-202ENST00000376237 MYH7P12883 1935 aa27.54■■■□□ 2
HLA-C-202ENST00000376237 AIDAQ96BJ3 306 aa27.54■■■□□ 2
HLA-C-202ENST00000376237 SBF1O95248 1867 aa27.54■■■□□ 2
HLA-C-202ENST00000376237 ZC3H4Q9UPT8 1303 aaKnown RBP27.54■■■□□ 2
HLA-C-202ENST00000376237 MAST2Q6P0Q8 1798 aa27.54■■■□□ 2
HLA-C-202ENST00000376237 DICER1Q9UPY3 1922 aaKnown RBP27.53■■■□□ 2
HLA-C-202ENST00000376237 F8W031 263 aaPredicted RBP27.53■■■□□ 2
HLA-C-202ENST00000376237 BAG3O95817 575 aa27.53■■■□□ 2
HLA-C-202ENST00000376237 HHIPL2Q6UWX4 724 aa27.53■■■□□ 2
HLA-C-202ENST00000376237 OGFOD1Q8N543 542 aa27.53■■■□□ 2
HLA-C-202ENST00000376237 NOL10Q9BSC4 688 aaKnown RBP27.53■■■□□ 2
HLA-C-202ENST00000376237 HDAC9Q9UKV0 1011 aa27.53■■■□□ 2
HLA-C-202ENST00000376237 MROH7-TTC4A0A0A0MT08 1334 aa27.53■■■□□ 2
HLA-C-202ENST00000376237 CCDC171Q6TFL3 1326 aa27.53■■■□□ 2
HLA-C-202ENST00000376237 CCDC88AQ3V6T2 1871 aa27.53■■■□□ 2
HLA-C-202ENST00000376237 EPB41L2O43491 1005 aaKnown RBP27.52■■■□□ 2
HLA-C-202ENST00000376237 DIXDC1Q155Q3 683 aa27.52■■■□□ 2
HLA-C-202ENST00000376237 ADGRA1Q86SQ6 560 aa27.52■■■□□ 2
HLA-C-202ENST00000376237 DPF2Q92785 391 aa27.52■■■□□ 2
HLA-C-202ENST00000376237 TEKT1Q969V4 418 aa27.52■■■□□ 2
HLA-C-202ENST00000376237 IL25Q9H293 177 aa27.52■■■□□ 2
HLA-C-202ENST00000376237 SERPINA10Q9UK55 444 aa27.52■■■□□ 2
HLA-C-202ENST00000376237 ZNF646O15015 1829 aaPredicted RBP27.52■■■□□ 2
HLA-C-202ENST00000376237 GAKO14976 1311 aa27.52■■■□□ 2
HLA-C-202ENST00000376237 MAGEB6P1A0A0J9YX57 407 aa27.51■■■□□ 2
HLA-C-202ENST00000376237 M0R2C6 588 aa27.51■■■□□ 2
HLA-C-202ENST00000376237 GPAA1O43292 621 aa27.51■■■□□ 2
HLA-C-202ENST00000376237 GPC2Q8N158 579 aa27.51■■■□□ 2
HLA-C-202ENST00000376237 ZBTB12Q9Y330 459 aaPredicted RBP27.51■■■□□ 2
HLA-C-202ENST00000376237 PPP4CP60510 307 aa27.51■■□□□ 1.99
HLA-C-202ENST00000376237 ZNF589Q86UQ0 364 aaPredicted RBP27.51■■□□□ 1.99
HLA-C-202ENST00000376237 UPF2Q9HAU5 1272 aaKnown RBP27.51■■□□□ 1.99
HLA-C-202ENST00000376237 ZNF541Q9H0D2 1346 aa27.5■■□□□ 1.99
HLA-C-202ENST00000376237 GPR75-ASB3A0A0A6YYF3 556 aa27.5■■□□□ 1.99
HLA-C-202ENST00000376237 SEC24BO95487 1268 aa27.5■■□□□ 1.99
HLA-C-202ENST00000376237 USP17L8P0C7I0 530 aa27.5■■□□□ 1.99
HLA-C-202ENST00000376237 GNAT2P19087 354 aa27.5■■□□□ 1.99
HLA-C-202ENST00000376237 MIGA1Q8NAN2 632 aa27.5■■□□□ 1.99
HLA-C-202ENST00000376237 RIOK1Q9BRS2 568 aaKnown RBP27.5■■□□□ 1.99
HLA-C-202ENST00000376237 ANO2Q9NQ90 1003 aa27.5■■□□□ 1.99
HLA-C-202ENST00000376237 GJA3Q9Y6H8 435 aa27.5■■□□□ 1.99
HLA-C-202ENST00000376237 MBD4O95243 580 aa27.49■■□□□ 1.99
HLA-C-202ENST00000376237 CRKP46108 304 aa27.49■■□□□ 1.99
HLA-C-202ENST00000376237 SCNN1DP51172 638 aa27.49■■□□□ 1.99
HLA-C-202ENST00000376237 ZDHHC15Q96MV8 337 aa27.49■■□□□ 1.99
HLA-C-202ENST00000376237 STRBPQ96SI9 672 aaKnown RBP27.49■■□□□ 1.99
HLA-C-202ENST00000376237 PLCG2P16885 1265 aa27.48■■□□□ 1.99
HLA-C-202ENST00000376237 CCDC129Q6ZRS4 1044 aa27.48■■□□□ 1.99
HLA-C-202ENST00000376237 DAGLAQ9Y4D2 1042 aa27.48■■□□□ 1.99
HLA-C-202ENST00000376237 DPY19L2Q6NUT2 758 aa27.47■■□□□ 1.99
HLA-C-202ENST00000376237 AATFQ9NY61 560 aaKnown RBP eCLIP27.47■■□□□ 1.99
HLA-C-202ENST00000376237 BTDP43251 543 aa27.46■■□□□ 1.99
HLA-C-202ENST00000376237 DSCC1Q9BVC3 393 aa27.46■■□□□ 1.99
HLA-C-202ENST00000376237 LSG1Q9H089 658 aaKnown RBP27.46■■□□□ 1.99
HLA-C-202ENST00000376237 ARMT1Q9H993 441 aa27.46■■□□□ 1.99
HLA-C-202ENST00000376237 RPAP1Q9BWH6 1393 aaPredicted RBP27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms