RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 NUTM2EB1AL46 878 aaPredicted RBP19.9■□□□□ 0.78
RXRB-201ENST00000374680 ATP2B1P20020 1258 aa19.9■□□□□ 0.78
RXRB-201ENST00000374680 NUTM2AQ8IVF1 878 aaPredicted RBP19.9■□□□□ 0.78
RXRB-201ENST00000374680 SMIM22K7EJ46 135 aa19.89■□□□□ 0.77
RXRB-201ENST00000374680 CDC27P30260 824 aa19.89■□□□□ 0.77
RXRB-201ENST00000374680 AOPEPQ8N6M6 819 aa19.89■□□□□ 0.77
RXRB-201ENST00000374680 SALL1Q9NSC2 1324 aa19.89■□□□□ 0.77
RXRB-201ENST00000374680 PDE8AO60658 829 aa19.89■□□□□ 0.77
RXRB-201ENST00000374680 MBD4O95243 580 aa19.89■□□□□ 0.77
RXRB-201ENST00000374680 BICDL1Q6ZP65 573 aa19.89■□□□□ 0.77
RXRB-201ENST00000374680 FBXO18Q8NFZ0 1043 aa19.89■□□□□ 0.77
RXRB-201ENST00000374680 CHMP4CQ96CF2 233 aa19.89■□□□□ 0.77
RXRB-201ENST00000374680 LMTK3Q96Q04 1460 aa19.88■□□□□ 0.77
RXRB-201ENST00000374680 PKD1L3Q7Z443 1732 aa19.88■□□□□ 0.77
RXRB-201ENST00000374680 ATP6V1AP38606 617 aa19.88■□□□□ 0.77
RXRB-201ENST00000374680 METAP2P50579 478 aaKnown RBP eCLIP19.88■□□□□ 0.77
RXRB-201ENST00000374680 ZNF592Q92610 1267 aa19.88■□□□□ 0.77
RXRB-201ENST00000374680 ABCF2Q9UG63 623 aa19.88■□□□□ 0.77
RXRB-201ENST00000374680 FAM160A1Q05DH4 1040 aa19.88■□□□□ 0.77
RXRB-201ENST00000374680 SPECC1Q5M775 1068 aa19.88■□□□□ 0.77
RXRB-201ENST00000374680 CCDC24Q8N4L8 307 aa19.88■□□□□ 0.77
RXRB-201ENST00000374680 CACTINQ8WUQ7 758 aaKnown RBP19.88■□□□□ 0.77
RXRB-201ENST00000374680 ALG1Q9BT22 464 aa19.88■□□□□ 0.77
RXRB-201ENST00000374680 PTPN21Q16825 1174 aa19.87■□□□□ 0.77
RXRB-201ENST00000374680 NEDD4P46934 1319 aa19.87■□□□□ 0.77
RXRB-201ENST00000374680 RASGRF1Q13972 1273 aa19.87■□□□□ 0.77
RXRB-201ENST00000374680 ZRSR1Q15695 479 aaKnown RBP19.87■□□□□ 0.77
RXRB-201ENST00000374680 MRPS27Q92552 414 aaKnown RBP19.87■□□□□ 0.77
RXRB-201ENST00000374680 SPTLC2O15270 562 aa19.86■□□□□ 0.77
RXRB-201ENST00000374680 MYSM1Q5VVJ2 828 aa19.86■□□□□ 0.77
RXRB-201ENST00000374680 VSIG10Q8N0Z9 540 aa19.86■□□□□ 0.77
RXRB-201ENST00000374680 LINC00301Q8NCQ3 95 aa19.86■□□□□ 0.77
RXRB-201ENST00000374680 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.86■□□□□ 0.77
RXRB-201ENST00000374680 RIC1Q4ADV7 1423 aa19.86■□□□□ 0.77
RXRB-201ENST00000374680 DHX16O60231 1041 aaKnown RBP19.86■□□□□ 0.77
RXRB-201ENST00000374680 IQCB1Q15051 598 aa19.86■□□□□ 0.77
RXRB-201ENST00000374680 TMEM67Q5HYA8 995 aa19.86■□□□□ 0.77
RXRB-201ENST00000374680 RBM43Q6ZSC3 357 aaKnown RBP19.86■□□□□ 0.77
RXRB-201ENST00000374680 PLA2G12BQ9BX93 195 aa19.86■□□□□ 0.77
RXRB-201ENST00000374680 NAPBQ9H115 298 aa19.86■□□□□ 0.77
RXRB-201ENST00000374680 VGLL2Q8N8G2 317 aa19.86■□□□□ 0.77
RXRB-201ENST00000374680 ENGASEQ8NFI3 743 aa19.86■□□□□ 0.77
RXRB-201ENST00000374680 TDRD7Q8NHU6 1098 aaKnown RBP19.86■□□□□ 0.77
RXRB-201ENST00000374680 CLIC6Q96NY7 704 aa19.86■□□□□ 0.77
RXRB-201ENST00000374680 ANGEL1Q9UNK9 670 aaKnown RBP19.86■□□□□ 0.77
RXRB-201ENST00000374680 IFIT3O14879 490 aaKnown RBP19.85■□□□□ 0.77
RXRB-201ENST00000374680 STX1AQ16623 288 aa19.85■□□□□ 0.77
RXRB-201ENST00000374680 SPATA5Q8NB90 893 aa19.85■□□□□ 0.77
RXRB-201ENST00000374680 TRMT1Q9NXH9 659 aaKnown RBP19.85■□□□□ 0.77
RXRB-201ENST00000374680 DPCR1Q3MIW9 517 aa19.85■□□□□ 0.77
RXRB-201ENST00000374680 HSP90AA4PQ58FG1 418 aa19.85■□□□□ 0.77
RXRB-201ENST00000374680 ZSCAN25Q6NSZ9 544 aa19.85■□□□□ 0.77
RXRB-201ENST00000374680 SLC26A6Q9BXS9 759 aa19.85■□□□□ 0.77
RXRB-201ENST00000374680 NIP7Q9Y221 180 aaKnown RBP eCLIP19.85■□□□□ 0.77
RXRB-201ENST00000374680 TNS2Q63HR2 1409 aa19.84■□□□□ 0.77
RXRB-201ENST00000374680 LAMA4Q16363 1823 aa19.84■□□□□ 0.77
RXRB-201ENST00000374680 MINDY4BA8MYZ0 360 aa19.84■□□□□ 0.77
RXRB-201ENST00000374680 STRBPQ96SI9 672 aaKnown RBP19.84■□□□□ 0.77
RXRB-201ENST00000374680 ZSWIM5Q9P217 1185 aa19.84■□□□□ 0.77
RXRB-201ENST00000374680 TACC3Q9Y6A5 838 aa19.84■□□□□ 0.77
RXRB-201ENST00000374680 NUP133Q8WUM0 1156 aa19.84■□□□□ 0.77
RXRB-201ENST00000374680 LRP2BPQ9P2M1 347 aa19.84■□□□□ 0.77
RXRB-201ENST00000374680 TJP1Q07157 1748 aa19.83■□□□□ 0.77
RXRB-201ENST00000374680 hCG_1642624A0A1W2PR95 340 aa19.83■□□□□ 0.77
RXRB-201ENST00000374680 WDHD1O75717 1129 aaPredicted RBP19.83■□□□□ 0.77
RXRB-201ENST00000374680 TDO2P48775 406 aa19.83■□□□□ 0.77
RXRB-201ENST00000374680 PUM3Q15397 648 aaKnown RBP19.83■□□□□ 0.77
RXRB-201ENST00000374680 PLA2G4DQ86XP0 818 aa19.83■□□□□ 0.77
RXRB-201ENST00000374680 EPB41L4AQ9HCS5 686 aaPredicted RBP19.83■□□□□ 0.77
RXRB-201ENST00000374680 GOLGA8AA7E2F4 631 aa19.83■□□□□ 0.76
RXRB-201ENST00000374680 SLC4A8Q2Y0W8 1093 aa19.83■□□□□ 0.76
RXRB-201ENST00000374680 KRT40Q6A162 431 aa19.83■□□□□ 0.76
RXRB-201ENST00000374680 APOA5Q6Q788 366 aa19.83■□□□□ 0.76
RXRB-201ENST00000374680 IFNL3Q8IZI9 196 aa19.83■□□□□ 0.76
RXRB-201ENST00000374680 FMR1NBQ8N0W7 255 aaPredicted RBP19.83■□□□□ 0.76
RXRB-201ENST00000374680 RTEL1Q9NZ71 1219 aa19.83■□□□□ 0.76
RXRB-201ENST00000374680 RIOK3O14730 519 aaKnown RBP19.82■□□□□ 0.76
RXRB-201ENST00000374680 ZBTB43O43298 467 aa19.82■□□□□ 0.76
RXRB-201ENST00000374680 KCNQ2O43526 872 aa19.82■□□□□ 0.76
RXRB-201ENST00000374680 KIF23Q02241 960 aaPredicted RBP19.82■□□□□ 0.76
RXRB-201ENST00000374680 SDR42E1Q8WUS8 393 aa19.82■□□□□ 0.76
RXRB-201ENST00000374680 LPIN2Q92539 896 aa19.82■□□□□ 0.76
RXRB-201ENST00000374680 KCNJ14Q9UNX9 436 aa19.82■□□□□ 0.76
RXRB-201ENST00000374680 CRKLP46109 303 aaKnown RBP19.82■□□□□ 0.76
RXRB-201ENST00000374680 ANO1Q5XXA6 986 aa19.82■□□□□ 0.76
RXRB-201ENST00000374680 ADALQ6DHV7 355 aa19.82■□□□□ 0.76
RXRB-201ENST00000374680 VPS37DQ86XT2 251 aa19.82■□□□□ 0.76
RXRB-201ENST00000374680 LCORLQ8N3X6 602 aa19.82■□□□□ 0.76
RXRB-201ENST00000374680 MYRIPQ8NFW9 859 aa19.82■□□□□ 0.76
RXRB-201ENST00000374680 JAG2Q9Y219 1238 aa19.82■□□□□ 0.76
RXRB-201ENST00000374680 ZNF202O95125 648 aa19.82■□□□□ 0.76
RXRB-201ENST00000374680 GUCY1A2P33402 732 aa19.82■□□□□ 0.76
RXRB-201ENST00000374680 TTF1Q15361 905 aaPredicted RBP19.82■□□□□ 0.76
RXRB-201ENST00000374680 DHX40Q8IX18 779 aaKnown RBP19.82■□□□□ 0.76
RXRB-201ENST00000374680 ANO10Q9NW15 660 aa19.82■□□□□ 0.76
RXRB-201ENST00000374680 FBXO3Q9UK99 471 aa19.82■□□□□ 0.76
RXRB-201ENST00000374680 SLC4A4Q9Y6R1 1079 aa19.82■□□□□ 0.76
RXRB-201ENST00000374680 SLC5A1P13866 664 aa19.81■□□□□ 0.76
RXRB-201ENST00000374680 TPD52L1Q16890 204 aaPredicted RBP19.81■□□□□ 0.76
RXRB-201ENST00000374680 PDCL3Q9H2J4 239 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms