RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 WWC2Q6AWC2 1192 aa14.85□□□□□ -0.03
PRPF4-201ENST00000374198 NAA16Q6N069 864 aaPredicted RBP14.85□□□□□ -0.03
PRPF4-201ENST00000374198 RPAINQ86UA6 219 aa14.85□□□□□ -0.03
PRPF4-201ENST00000374198 EVI5LQ96CN4 794 aa14.85□□□□□ -0.03
PRPF4-201ENST00000374198 FAM204AQ9H8W3 233 aa14.85□□□□□ -0.03
PRPF4-201ENST00000374198 SBNO1A3KN83 1393 aa14.84□□□□□ -0.03
PRPF4-201ENST00000374198 ACEP12821 1306 aa14.84□□□□□ -0.03
PRPF4-201ENST00000374198 IKBKBO14920 756 aa14.84□□□□□ -0.03
PRPF4-201ENST00000374198 SATB1Q01826 763 aa14.84□□□□□ -0.03
PRPF4-201ENST00000374198 CASP8Q14790 479 aa14.84□□□□□ -0.03
PRPF4-201ENST00000374198 VSTM4Q8IW00 320 aa14.84□□□□□ -0.03
PRPF4-201ENST00000374198 DPF2Q92785 391 aa14.84□□□□□ -0.03
PRPF4-201ENST00000374198 FAM227BQ96M60 508 aa14.84□□□□□ -0.03
PRPF4-201ENST00000374198 HSD3B7Q9H2F3 369 aa14.84□□□□□ -0.03
PRPF4-201ENST00000374198 RGS17Q9UGC6 210 aaPredicted RBP14.84□□□□□ -0.03
PRPF4-201ENST00000374198 BIN1O00499 593 aa14.84□□□□□ -0.03
PRPF4-201ENST00000374198 TOP1P11387 765 aaKnown RBP14.84□□□□□ -0.03
PRPF4-201ENST00000374198 HNRNPH1P31943 449 aaKnown RBP14.84□□□□□ -0.03
PRPF4-201ENST00000374198 CCDC12Q8WUD4 166 aaPredicted RBP14.84□□□□□ -0.03
PRPF4-201ENST00000374198 BCCIPQ9P287 314 aaKnown RBP eCLIP14.84□□□□□ -0.03
PRPF4-201ENST00000374198 A0A1B0GVL5 298 aa14.83□□□□□ -0.04
PRPF4-201ENST00000374198 NMIQ13287 307 aaPredicted RBP14.83□□□□□ -0.04
PRPF4-201ENST00000374198 PLEKHO1Q53GL0 409 aaPredicted RBP14.83□□□□□ -0.04
PRPF4-201ENST00000374198 HSP90AB4PQ58FF6 505 aa14.83□□□□□ -0.04
PRPF4-201ENST00000374198 ECHDC1Q9NTX5 307 aa14.83□□□□□ -0.04
PRPF4-201ENST00000374198 PCDHA7Q9UN72 937 aa14.83□□□□□ -0.04
PRPF4-201ENST00000374198 PLEKHG3A1L390 1219 aa14.83□□□□□ -0.04
PRPF4-201ENST00000374198 SERPINC1P01008 464 aa14.83□□□□□ -0.04
PRPF4-201ENST00000374198 USP8P40818 1118 aa14.83□□□□□ -0.04
PRPF4-201ENST00000374198 TDO2P48775 406 aa14.83□□□□□ -0.04
PRPF4-201ENST00000374198 NDUFA8P51970 172 aa14.83□□□□□ -0.04
PRPF4-201ENST00000374198 CFAP100Q494V2 611 aa14.83□□□□□ -0.04
PRPF4-201ENST00000374198 NGLY1Q96IV0 654 aa14.83□□□□□ -0.04
PRPF4-201ENST00000374198 BAG1Q99933 345 aaPredicted RBP14.83□□□□□ -0.04
PRPF4-201ENST00000374198 SNRKQ9NRH2 765 aa14.83□□□□□ -0.04
PRPF4-201ENST00000374198 WDHD1O75717 1129 aaPredicted RBP14.82□□□□□ -0.04
PRPF4-201ENST00000374198 ADALQ6DHV7 355 aa14.82□□□□□ -0.04
PRPF4-201ENST00000374198 TOGARAM2Q6ZUX3 1019 aa14.82□□□□□ -0.04
PRPF4-201ENST00000374198 CEP112Q8N8E3 955 aa14.82□□□□□ -0.04
PRPF4-201ENST00000374198 ACBD3Q9H3P7 528 aa14.82□□□□□ -0.04
PRPF4-201ENST00000374198 PUF60Q9UHX1 559 aaKnown RBP14.82□□□□□ -0.04
PRPF4-201ENST00000374198 NEDD4P46934 1319 aa14.82□□□□□ -0.04
PRPF4-201ENST00000374198 EXOC5O00471 708 aa14.82□□□□□ -0.04
PRPF4-201ENST00000374198 SLC3A2P08195 630 aaKnown RBP14.82□□□□□ -0.04
PRPF4-201ENST00000374198 SMARCC2Q8TAQ2 1214 aa14.82□□□□□ -0.04
PRPF4-201ENST00000374198 CABLES1Q8TDN4 633 aa14.82□□□□□ -0.04
PRPF4-201ENST00000374198 A0A1W2PQ27 194 aa14.81□□□□□ -0.04
PRPF4-201ENST00000374198 A0A1W2PQ64 194 aa14.81□□□□□ -0.04
PRPF4-201ENST00000374198 A0A1W2PQD8 194 aa14.81□□□□□ -0.04
PRPF4-201ENST00000374198 HIP1O00291 1037 aa14.81□□□□□ -0.04
PRPF4-201ENST00000374198 LIG3P49916 1009 aa14.81□□□□□ -0.04
PRPF4-201ENST00000374198 TUBB4BP68371 445 aa14.81□□□□□ -0.04
PRPF4-201ENST00000374198 EIF4A2Q14240 407 aaKnown RBP14.81□□□□□ -0.04
PRPF4-201ENST00000374198 TTLL5Q6EMB2 1281 aa14.81□□□□□ -0.04
PRPF4-201ENST00000374198 COG3Q96JB2 828 aa14.81□□□□□ -0.04
PRPF4-201ENST00000374198 HMG20BQ9P0W2 317 aa14.81□□□□□ -0.04
PRPF4-201ENST00000374198 TOPAZ1Q8N9V7 1692 aa14.81□□□□□ -0.04
PRPF4-201ENST00000374198 AFF2P51816 1311 aa14.81□□□□□ -0.04
PRPF4-201ENST00000374198 COL22A1Q8NFW1 1626 aaPredicted RBP14.81□□□□□ -0.04
PRPF4-201ENST00000374198 STX10O60499 249 aa14.81□□□□□ -0.04
PRPF4-201ENST00000374198 FOSBP53539 338 aa14.81□□□□□ -0.04
PRPF4-201ENST00000374198 ZNF772Q68DY9 489 aaPredicted RBP14.81□□□□□ -0.04
PRPF4-201ENST00000374198 KCNV1Q6PIU1 500 aa14.81□□□□□ -0.04
PRPF4-201ENST00000374198 CLASRPQ8N2M8 674 aaKnown RBP14.81□□□□□ -0.04
PRPF4-201ENST00000374198 AFAP1L1Q8TED9 768 aa14.81□□□□□ -0.04
PRPF4-201ENST00000374198 GBP3Q9H0R5 595 aa14.81□□□□□ -0.04
PRPF4-201ENST00000374198 EDC4Q6P2E9 1401 aaKnown RBP14.81□□□□□ -0.04
PRPF4-201ENST00000374198 PXDNLA1KZ92 1463 aa14.81□□□□□ -0.04
PRPF4-201ENST00000374198 ISM2Q6H9L7 571 aa14.8□□□□□ -0.04
PRPF4-201ENST00000374198 NECTIN2Q92692 538 aa14.8□□□□□ -0.04
PRPF4-201ENST00000374198 GPATCH3Q96I76 525 aa14.8□□□□□ -0.04
PRPF4-201ENST00000374198 LLPHQ9BRT6 129 aaKnown RBP14.8□□□□□ -0.04
PRPF4-201ENST00000374198 CDC23Q9UJX2 597 aa14.8□□□□□ -0.04
PRPF4-201ENST00000374198 CCDC189A1A4V9 331 aa14.8□□□□□ -0.04
PRPF4-201ENST00000374198 TMEM232C9JQI7 657 aa14.8□□□□□ -0.04
PRPF4-201ENST00000374198 RNF40O75150 1001 aa14.8□□□□□ -0.04
PRPF4-201ENST00000374198 HSP90B1P14625 803 aaKnown RBP14.8□□□□□ -0.04
PRPF4-201ENST00000374198 OS9Q13438 667 aaPredicted RBP14.8□□□□□ -0.04
PRPF4-201ENST00000374198 POTEAQ6S8J7 498 aa14.8□□□□□ -0.04
PRPF4-201ENST00000374198 SIL1Q9H173 461 aa14.8□□□□□ -0.04
PRPF4-201ENST00000374198 VSNL1P62760 191 aa14.79□□□□□ -0.04
PRPF4-201ENST00000374198 SCRN1Q12765 414 aa14.79□□□□□ -0.04
PRPF4-201ENST00000374198 KARSQ15046 597 aaKnown RBP14.79□□□□□ -0.04
PRPF4-201ENST00000374198 NUTM2GQ5VZR2 741 aa14.79□□□□□ -0.04
PRPF4-201ENST00000374198 LRRIQ3A6PVS8 624 aaPredicted RBP14.79□□□□□ -0.04
PRPF4-201ENST00000374198 PTPN21Q16825 1174 aa14.79□□□□□ -0.04
PRPF4-201ENST00000374198 SKIDA1Q1XH10 827 aa14.79□□□□□ -0.04
PRPF4-201ENST00000374198 FBXW10Q5XX13 1052 aa14.79□□□□□ -0.04
PRPF4-201ENST00000374198 FAM212AQ96EL1 285 aa14.79□□□□□ -0.04
PRPF4-201ENST00000374198 ABCC6O95255 1503 aa14.79□□□□□ -0.04
PRPF4-201ENST00000374198 TRDNQ13061 729 aa14.79□□□□□ -0.04
PRPF4-201ENST00000374198 Q6ZUG5 572 aa14.79□□□□□ -0.04
PRPF4-201ENST00000374198 CEP120Q8N960 986 aa14.79□□□□□ -0.04
PRPF4-201ENST00000374198 CLIC6Q96NY7 704 aa14.79□□□□□ -0.04
PRPF4-201ENST00000374198 MYH15Q9Y2K3 1946 aa14.78□□□□□ -0.04
PRPF4-201ENST00000374198 A0A0D9SFI3 127 aa14.78□□□□□ -0.04
PRPF4-201ENST00000374198 RHOXF2BP0C7M4 288 aa14.78□□□□□ -0.04
PRPF4-201ENST00000374198 MYL5Q02045 173 aa14.78□□□□□ -0.04
PRPF4-201ENST00000374198 TBX2Q13207 712 aaPredicted RBP14.78□□□□□ -0.04
PRPF4-201ENST00000374198 CNPY4Q8N129 248 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms