RNA–Protein interactions for RNA: ENST00000373485.5

RBBP4-201, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBBP4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-201ENST00000373485 ZNF609O15014 1411 aa11.33□□□□□ -0.6
RBBP4-201ENST00000373485 IL1R1P14778 569 aa11.33□□□□□ -0.6
RBBP4-201ENST00000373485 PHKA1P46020 1223 aa11.33□□□□□ -0.6
RBBP4-201ENST00000373485 GTF2IP78347 998 aa11.33□□□□□ -0.6
RBBP4-201ENST00000373485 TNIP1Q15025 636 aa11.33□□□□□ -0.6
RBBP4-201ENST00000373485 AACSQ86V21 672 aa11.33□□□□□ -0.6
RBBP4-201ENST00000373485 CLASRPQ8N2M8 674 aaKnown RBP11.33□□□□□ -0.6
RBBP4-201ENST00000373485 DBNDD2Q9BQY9 259 aa11.33□□□□□ -0.6
RBBP4-201ENST00000373485 MXD3Q9BW11 206 aa11.33□□□□□ -0.6
RBBP4-201ENST00000373485 LRRCC1Q9C099 1032 aa11.33□□□□□ -0.6
RBBP4-201ENST00000373485 USP17L3A6NCW0 530 aa11.32□□□□□ -0.6
RBBP4-201ENST00000373485 USP17L4A6NCW7 530 aa11.32□□□□□ -0.6
RBBP4-201ENST00000373485 HOXB3P14651 431 aaPredicted RBP11.32□□□□□ -0.6
RBBP4-201ENST00000373485 CHAF1AQ13111 956 aaPredicted RBP11.32□□□□□ -0.6
RBBP4-201ENST00000373485 CCDC102BQ68D86 513 aa11.32□□□□□ -0.6
RBBP4-201ENST00000373485 TTLL5Q6EMB2 1281 aa11.32□□□□□ -0.6
RBBP4-201ENST00000373485 USP17L1Q7RTZ2 530 aa11.32□□□□□ -0.6
RBBP4-201ENST00000373485 GPC2Q8N158 579 aa11.32□□□□□ -0.6
RBBP4-201ENST00000373485 TDRD7Q8NHU6 1098 aaKnown RBP11.32□□□□□ -0.6
RBBP4-201ENST00000373485 TLR7Q9NYK1 1049 aaKnown RBP11.32□□□□□ -0.6
RBBP4-201ENST00000373485 SCN9AQ15858 1988 aa11.32□□□□□ -0.6
RBBP4-201ENST00000373485 KDM2BQ8NHM5 1336 aa11.31□□□□□ -0.6
RBBP4-201ENST00000373485 VIL1P09327 827 aaKnown RBP11.31□□□□□ -0.6
RBBP4-201ENST00000373485 GMPSP49915 693 aaPredicted RBP11.31□□□□□ -0.6
RBBP4-201ENST00000373485 FOXK1P85037 733 aa11.31□□□□□ -0.6
RBBP4-201ENST00000373485 B4GALNT3Q6L9W6 998 aa11.31□□□□□ -0.6
RBBP4-201ENST00000373485 GCC1Q96CN9 775 aa11.31□□□□□ -0.6
RBBP4-201ENST00000373485 RRAGCQ9HB90 399 aa11.31□□□□□ -0.6
RBBP4-201ENST00000373485 GNL3LQ9NVN8 582 aaKnown RBP11.31□□□□□ -0.6
RBBP4-201ENST00000373485 DBNLQ9UJU6 430 aaKnown RBP11.31□□□□□ -0.6
RBBP4-201ENST00000373485 ARAP2Q8WZ64 1704 aa11.3□□□□□ -0.6
RBBP4-201ENST00000373485 IFIT2P09913 472 aaKnown RBP11.3□□□□□ -0.6
RBBP4-201ENST00000373485 PDE4AP27815 886 aa11.3□□□□□ -0.6
RBBP4-201ENST00000373485 CCDC158Q5M9N0 1113 aa11.3□□□□□ -0.6
RBBP4-201ENST00000373485 TTC39AQ5SRH9 613 aa11.3□□□□□ -0.6
RBBP4-201ENST00000373485 DACT2Q5SW24 774 aa11.3□□□□□ -0.6
RBBP4-201ENST00000373485 ANKRD45Q5TZF3 282 aa11.3□□□□□ -0.6
RBBP4-201ENST00000373485 STRIP1Q5VSL9 837 aa11.3□□□□□ -0.6
RBBP4-201ENST00000373485 ZNF784Q8NCA9 323 aaPredicted RBP11.3□□□□□ -0.6
RBBP4-201ENST00000373485 GPBP1L1Q9HC44 474 aaPredicted RBP11.3□□□□□ -0.6
RBBP4-201ENST00000373485 NMRK2Q9NPI5 230 aa11.3□□□□□ -0.6
RBBP4-201ENST00000373485 SHTN1A0MZ66 631 aa11.29□□□□□ -0.6
RBBP4-201ENST00000373485 RSBN1LQ6PCB5 846 aaPredicted RBP11.29□□□□□ -0.6
RBBP4-201ENST00000373485 POTECB2RU33 542 aa11.28□□□□□ -0.6
RBBP4-201ENST00000373485 F8W031 263 aaPredicted RBP11.28□□□□□ -0.6
RBBP4-201ENST00000373485 LMOD1P29536 600 aaPredicted RBP11.28□□□□□ -0.6
RBBP4-201ENST00000373485 EPS15P42566 896 aa11.28□□□□□ -0.6
RBBP4-201ENST00000373485 SCNN1DP51172 638 aa11.28□□□□□ -0.6
RBBP4-201ENST00000373485 PLCB2Q00722 1185 aa11.28□□□□□ -0.6
RBBP4-201ENST00000373485 RASGRF1Q13972 1273 aa11.28□□□□□ -0.6
RBBP4-201ENST00000373485 SCARF1Q14162 830 aa11.28□□□□□ -0.6
RBBP4-201ENST00000373485 LCE2DQ5TA82 110 aaPredicted RBP11.28□□□□□ -0.6
RBBP4-201ENST00000373485 KIAA0825Q8IV33 1275 aa11.28□□□□□ -0.6
RBBP4-201ENST00000373485 SMC5Q8IY18 1101 aa11.28□□□□□ -0.6
RBBP4-201ENST00000373485 C16orf71Q8IYS4 520 aaPredicted RBP11.28□□□□□ -0.6
RBBP4-201ENST00000373485 SNRKQ9NRH2 765 aa11.28□□□□□ -0.6
RBBP4-201ENST00000373485 CNOT7Q9UIV1 285 aaKnown RBP11.28□□□□□ -0.6
RBBP4-201ENST00000373485 DENND2AQ9ULE3 1009 aa11.28□□□□□ -0.6
RBBP4-201ENST00000373485 FAM205AQ6ZU69 1335 aa11.28□□□□□ -0.6
RBBP4-201ENST00000373485 UQCRFS1P1P0C7P4 283 aa11.27□□□□□ -0.6
RBBP4-201ENST00000373485 VEGFAP15692 232 aaPredicted RBP11.27□□□□□ -0.6
RBBP4-201ENST00000373485 ARID4AP29374 1257 aaPredicted RBP11.27□□□□□ -0.6
RBBP4-201ENST00000373485 MFSD10Q14728 455 aa11.27□□□□□ -0.6
RBBP4-201ENST00000373485 MFSD14BQ5SR56 506 aa11.27□□□□□ -0.6
RBBP4-201ENST00000373485 PI16Q6UXB8 463 aa11.27□□□□□ -0.6
RBBP4-201ENST00000373485 CERS5Q8N5B7 392 aa11.27□□□□□ -0.6
RBBP4-201ENST00000373485 AGBL3Q8NEM8 1001 aa11.27□□□□□ -0.6
RBBP4-201ENST00000373485 GPRC5DQ9NZD1 345 aa11.27□□□□□ -0.6
RBBP4-201ENST00000373485 HMG20BQ9P0W2 317 aa11.27□□□□□ -0.6
RBBP4-201ENST00000373485 HACL1Q9UJ83 578 aa11.27□□□□□ -0.6
RBBP4-201ENST00000373485 PSME4Q14997 1843 aa11.27□□□□□ -0.61
RBBP4-201ENST00000373485 COL1A1P02452 1464 aaPredicted RBP11.27□□□□□ -0.61
RBBP4-201ENST00000373485 IQCA1LA6NCM1 817 aa11.26□□□□□ -0.61
RBBP4-201ENST00000373485 H7C1D1 291 aa11.26□□□□□ -0.61
RBBP4-201ENST00000373485 SEMA3EO15041 775 aa11.26□□□□□ -0.61
RBBP4-201ENST00000373485 RPS12P25398 132 aaKnown RBP11.26□□□□□ -0.61
RBBP4-201ENST00000373485 MCAMP43121 646 aa11.26□□□□□ -0.61
RBBP4-201ENST00000373485 GRIK5Q16478 980 aa11.26□□□□□ -0.61
RBBP4-201ENST00000373485 RBM26Q5T8P6 1007 aaKnown RBP11.26□□□□□ -0.61
RBBP4-201ENST00000373485 SPATA5Q8NB90 893 aa11.26□□□□□ -0.61
RBBP4-201ENST00000373485 OTUD7AQ8TE49 926 aaPredicted RBP11.26□□□□□ -0.61
RBBP4-201ENST00000373485 DPF2Q92785 391 aa11.26□□□□□ -0.61
RBBP4-201ENST00000373485 GMLQ99445 158 aa11.26□□□□□ -0.61
RBBP4-201ENST00000373485 LNPKQ9C0E8 428 aa11.26□□□□□ -0.61
RBBP4-201ENST00000373485 ZSWIM6Q9HCJ5 1215 aa11.26□□□□□ -0.61
RBBP4-201ENST00000373485 WDR90Q96KV7 1748 aa11.26□□□□□ -0.61
RBBP4-201ENST00000373485 MYO3BQ8WXR4 1341 aa11.26□□□□□ -0.61
RBBP4-201ENST00000373485 MYH13Q9UKX3 1938 aa11.26□□□□□ -0.61
RBBP4-201ENST00000373485 ZNF646O15015 1829 aaPredicted RBP11.26□□□□□ -0.61
RBBP4-201ENST00000373485 SLC34A2O95436 690 aa11.26□□□□□ -0.61
RBBP4-201ENST00000373485 USP17L8P0C7I0 530 aa11.26□□□□□ -0.61
RBBP4-201ENST00000373485 EPHX2P34913 555 aa11.26□□□□□ -0.61
RBBP4-201ENST00000373485 DSG2Q14126 1118 aa11.26□□□□□ -0.61
RBBP4-201ENST00000373485 TSHZ3Q63HK5 1081 aa11.26□□□□□ -0.61
RBBP4-201ENST00000373485 SAMD7Q7Z3H4 446 aa11.26□□□□□ -0.61
RBBP4-201ENST00000373485 CHD1LQ86WJ1 897 aa11.26□□□□□ -0.61
RBBP4-201ENST00000373485 WDR66Q8TBY9 1149 aa11.26□□□□□ -0.61
RBBP4-201ENST00000373485 TBC1D22AQ8WUA7 517 aa11.26□□□□□ -0.61
RBBP4-201ENST00000373485 ABCF2Q9UG63 623 aa11.26□□□□□ -0.61
RBBP4-201ENST00000373485 NDUFB9Q9Y6M9 179 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms