RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 BCL9O00512 1426 aa12.95□□□□□ -0.34
RPRD1B-201ENST00000373433 TULP2O00295 520 aa12.95□□□□□ -0.34
RPRD1B-201ENST00000373433 EPB41L2O43491 1005 aaKnown RBP12.95□□□□□ -0.34
RPRD1B-201ENST00000373433 SLFNL1Q499Z3 407 aa12.95□□□□□ -0.34
RPRD1B-201ENST00000373433 SUSD4Q5VX71 490 aa12.95□□□□□ -0.34
RPRD1B-201ENST00000373433 TMCO3Q6UWJ1 677 aa12.95□□□□□ -0.34
RPRD1B-201ENST00000373433 ZNF622Q969S3 477 aaKnown RBP eCLIP12.95□□□□□ -0.34
RPRD1B-201ENST00000373433 DDX11Q96FC9 970 aa12.95□□□□□ -0.34
RPRD1B-201ENST00000373433 TSPYL1Q9H0U9 437 aa12.95□□□□□ -0.34
RPRD1B-201ENST00000373433 PNMA6AP0CW24 399 aaPredicted RBP12.94□□□□□ -0.34
RPRD1B-201ENST00000373433 EIF5P55010 431 aaKnown RBP12.94□□□□□ -0.34
RPRD1B-201ENST00000373433 PI4K2BQ8TCG2 481 aa12.94□□□□□ -0.34
RPRD1B-201ENST00000373433 FEZ2Q9UHY8 353 aaPredicted RBP12.94□□□□□ -0.34
RPRD1B-201ENST00000373433 TRPM3Q9HCF6 1732 aaPredicted RBP12.94□□□□□ -0.34
RPRD1B-201ENST00000373433 C6orf229H3BNL8 230 aa12.94□□□□□ -0.34
RPRD1B-201ENST00000373433 TAF5LO75529 589 aa12.94□□□□□ -0.34
RPRD1B-201ENST00000373433 ERCC4Q92889 916 aaPredicted RBP12.94□□□□□ -0.34
RPRD1B-201ENST00000373433 PUS3Q9BZE2 481 aaKnown RBP12.94□□□□□ -0.34
RPRD1B-201ENST00000373433 ARGLU1Q9NWB6 273 aaPredicted RBP12.94□□□□□ -0.34
RPRD1B-201ENST00000373433 ALS2Q96Q42 1657 aa12.94□□□□□ -0.34
RPRD1B-201ENST00000373433 CCZ1BP86790 482 aa12.94□□□□□ -0.34
RPRD1B-201ENST00000373433 CCZ1P86791 482 aaPredicted RBP12.94□□□□□ -0.34
RPRD1B-201ENST00000373433 TRDNQ13061 729 aa12.94□□□□□ -0.34
RPRD1B-201ENST00000373433 UBXN4Q92575 508 aa12.94□□□□□ -0.34
RPRD1B-201ENST00000373433 STK32BQ9NY57 414 aa12.94□□□□□ -0.34
RPRD1B-201ENST00000373433 COL15A1P39059 1388 aa12.94□□□□□ -0.34
RPRD1B-201ENST00000373433 POLA2Q14181 598 aa12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 NFXL1Q6ZNB6 911 aa12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 KRBA2Q6ZNG9 492 aa12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 MNS1Q8NEH6 495 aa12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 PGBD1Q96JS3 809 aa12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 ISCA1Q9BUE6 129 aa12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 TMX1Q9H3N1 280 aa12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 FHOD1Q9Y613 1164 aa12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 NDUFB9Q9Y6M9 179 aa12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 AOX1Q06278 1338 aa12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 CPLX1O14810 134 aa12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 BAG6P46379 1132 aa12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 PTPN12Q05209 780 aaKnown RBP12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 SLC20A2Q08357 652 aa12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 LINC00116Q8NCU8 138 aa12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 MRFAP1L1Q96HT8 127 aa12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 PARP3Q9Y6F1 533 aa12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 PLEKHG2Q9H7P9 1386 aa12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 KIF2AO00139 706 aaPredicted RBP12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 CDC25BP30305 580 aa12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 TPM4P67936 248 aa12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 SLC4A8Q2Y0W8 1093 aa12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 MSL1Q68DK7 614 aa12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 ZSWIM6Q9HCJ5 1215 aa12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 RGPD5Q99666 1765 aa12.93□□□□□ -0.34
RPRD1B-201ENST00000373433 SMC2O95347 1197 aa12.92□□□□□ -0.34
RPRD1B-201ENST00000373433 C10orf67Q8IYJ2 551 aa12.92□□□□□ -0.34
RPRD1B-201ENST00000373433 AOPEPQ8N6M6 819 aa12.92□□□□□ -0.34
RPRD1B-201ENST00000373433 FAM53CQ9NYF3 392 aa12.92□□□□□ -0.34
RPRD1B-201ENST00000373433 RGPD2P0DJD1 1756 aa12.92□□□□□ -0.34
RPRD1B-201ENST00000373433 MARCH6O60337 910 aa12.92□□□□□ -0.34
RPRD1B-201ENST00000373433 STX1AQ16623 288 aa12.92□□□□□ -0.34
RPRD1B-201ENST00000373433 TXNRD1Q16881 649 aa12.92□□□□□ -0.34
RPRD1B-201ENST00000373433 ARHGEF1Q92888 912 aaKnown RBP12.92□□□□□ -0.34
RPRD1B-201ENST00000373433 RBM8AQ9Y5S9 174 aaKnown RBP12.92□□□□□ -0.34
RPRD1B-201ENST00000373433 SEC31AO94979 1220 aaKnown RBP12.92□□□□□ -0.34
RPRD1B-201ENST00000373433 IRX3P78415 501 aaPredicted RBP12.92□□□□□ -0.34
RPRD1B-201ENST00000373433 IQCB1Q15051 598 aa12.92□□□□□ -0.34
RPRD1B-201ENST00000373433 CLEC4GQ6UXB4 293 aa12.92□□□□□ -0.34
RPRD1B-201ENST00000373433 PTF1AQ7RTS3 328 aa12.92□□□□□ -0.34
RPRD1B-201ENST00000373433 RALYLQ86SE5 291 aaKnown RBP12.92□□□□□ -0.34
RPRD1B-201ENST00000373433 SLC4A9Q96Q91 983 aa12.92□□□□□ -0.34
RPRD1B-201ENST00000373433 RSPH14Q9UHP6 348 aa12.92□□□□□ -0.34
RPRD1B-201ENST00000373433 H2AFXP16104 143 aaPredicted RBP12.91□□□□□ -0.34
RPRD1B-201ENST00000373433 PLA2G4AP47712 749 aa12.91□□□□□ -0.34
RPRD1B-201ENST00000373433 ATP2B2Q01814 1243 aa12.91□□□□□ -0.34
RPRD1B-201ENST00000373433 MTX1Q13505 466 aa12.91□□□□□ -0.34
RPRD1B-201ENST00000373433 COL9A3Q14050 684 aaPredicted RBP12.91□□□□□ -0.34
RPRD1B-201ENST00000373433 BLOC1S2Q6QNY1 142 aa12.91□□□□□ -0.34
RPRD1B-201ENST00000373433 NRDCO43847 1150 aa12.91□□□□□ -0.34
RPRD1B-201ENST00000373433 MAP3K12Q12852 859 aa12.91□□□□□ -0.34
RPRD1B-201ENST00000373433 ERFEQ4G0M1 354 aa12.91□□□□□ -0.34
RPRD1B-201ENST00000373433 PAXIP1Q6ZW49 1069 aaPredicted RBP12.91□□□□□ -0.34
RPRD1B-201ENST00000373433 XAGE2Q96GT9 111 aa12.91□□□□□ -0.34
RPRD1B-201ENST00000373433 ZCCHC17Q9NP64 241 aaKnown RBP12.91□□□□□ -0.34
RPRD1B-201ENST00000373433 PAG1Q9NWQ8 432 aa12.91□□□□□ -0.34
RPRD1B-201ENST00000373433 NARFQ9UHQ1 456 aa12.91□□□□□ -0.34
RPRD1B-201ENST00000373433 DNAI1Q9UI46 699 aa12.91□□□□□ -0.34
RPRD1B-201ENST00000373433 LTBP4Q8N2S1 1624 aa12.91□□□□□ -0.34
RPRD1B-201ENST00000373433 TRIM28Q13263 835 aaKnown RBP12.91□□□□□ -0.34
RPRD1B-201ENST00000373433 TTLL11Q8NHH1 800 aa12.91□□□□□ -0.34
RPRD1B-201ENST00000373433 AIDAQ96BJ3 306 aa12.91□□□□□ -0.34
RPRD1B-201ENST00000373433 CCDC34Q96HJ3 373 aa12.91□□□□□ -0.34
RPRD1B-201ENST00000373433 SEC31BQ9NQW1 1179 aa12.91□□□□□ -0.34
RPRD1B-201ENST00000373433 PHRF1Q9P1Y6 1649 aaKnown RBP12.91□□□□□ -0.34
RPRD1B-201ENST00000373433 SASH1O94885 1247 aa12.9□□□□□ -0.34
RPRD1B-201ENST00000373433 CAVIN2O95810 425 aa12.9□□□□□ -0.34
RPRD1B-201ENST00000373433 PSMA5P28066 241 aa12.9□□□□□ -0.34
RPRD1B-201ENST00000373433 FAM193AP78312 1265 aa12.9□□□□□ -0.34
RPRD1B-201ENST00000373433 GPS2Q13227 327 aa12.9□□□□□ -0.34
RPRD1B-201ENST00000373433 CCDC73Q6ZRK6 1079 aa12.9□□□□□ -0.34
RPRD1B-201ENST00000373433 TMC6Q7Z403 805 aa12.9□□□□□ -0.34
RPRD1B-201ENST00000373433 FAM177A1Q8N128 213 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms