RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 GCKRQ14397 625 aa9.48□□□□□ -0.89
GARNL3-201ENST00000373386 MCM6Q14566 821 aa9.48□□□□□ -0.89
GARNL3-201ENST00000373386 PROSER3Q2NL68 480 aa9.48□□□□□ -0.89
GARNL3-201ENST00000373386 CWC27Q6UX04 472 aaKnown RBP9.48□□□□□ -0.89
GARNL3-201ENST00000373386 TAX1BP1Q86VP1 789 aa9.48□□□□□ -0.89
GARNL3-201ENST00000373386 IFNL2Q8IZJ0 200 aa9.48□□□□□ -0.89
GARNL3-201ENST00000373386 CCDC26Q8TAB7 109 aa9.48□□□□□ -0.89
GARNL3-201ENST00000373386 TSC1Q92574 1164 aa9.48□□□□□ -0.89
GARNL3-201ENST00000373386 CCDC85AQ96PX6 553 aaPredicted RBP9.48□□□□□ -0.89
GARNL3-201ENST00000373386 ORAI2Q96SN7 254 aa9.48□□□□□ -0.89
GARNL3-201ENST00000373386 PDRG1Q9NUG6 133 aa9.48□□□□□ -0.89
GARNL3-201ENST00000373386 SPTLC3Q9NUV7 552 aa9.48□□□□□ -0.89
GARNL3-201ENST00000373386 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.48□□□□□ -0.89
GARNL3-201ENST00000373386 MEGF6O75095 1541 aa9.48□□□□□ -0.89
GARNL3-201ENST00000373386 CDKL5O76039 1030 aa9.47□□□□□ -0.89
GARNL3-201ENST00000373386 STK10O94804 968 aaKnown RBP9.47□□□□□ -0.89
GARNL3-201ENST00000373386 IGKV5-2P06315 115 aa9.47□□□□□ -0.89
GARNL3-201ENST00000373386 MYBL2P10244 700 aa9.47□□□□□ -0.89
GARNL3-201ENST00000373386 TATP17735 454 aaPredicted RBP9.47□□□□□ -0.89
GARNL3-201ENST00000373386 PDCP20941 246 aa9.47□□□□□ -0.89
GARNL3-201ENST00000373386 KRT32Q14532 448 aa9.47□□□□□ -0.89
GARNL3-201ENST00000373386 CLEC4GQ6UXB4 293 aa9.47□□□□□ -0.89
GARNL3-201ENST00000373386 TXLNBQ8N3L3 684 aa9.47□□□□□ -0.89
GARNL3-201ENST00000373386 THOC1Q96FV9 657 aaKnown RBP9.47□□□□□ -0.89
GARNL3-201ENST00000373386 BLOC1S6Q9UL45 172 aa9.47□□□□□ -0.89
GARNL3-201ENST00000373386 AXIN2Q9Y2T1 843 aa9.47□□□□□ -0.89
GARNL3-201ENST00000373386 CTDP1Q9Y5B0 961 aaPredicted RBP9.47□□□□□ -0.89
GARNL3-201ENST00000373386 TPM1P09493 284 aa9.47□□□□□ -0.89
GARNL3-201ENST00000373386 ATP5JP18859 108 aa9.47□□□□□ -0.89
GARNL3-201ENST00000373386 E2F4Q16254 413 aa9.47□□□□□ -0.89
GARNL3-201ENST00000373386 AACSQ86V21 672 aa9.47□□□□□ -0.89
GARNL3-201ENST00000373386 RAPGEF4Q8WZA2 1011 aa9.47□□□□□ -0.89
GARNL3-201ENST00000373386 AGAP3Q96P47 875 aa9.47□□□□□ -0.89
GARNL3-201ENST00000373386 BICC1Q9H694 974 aaKnown RBP9.47□□□□□ -0.89
GARNL3-201ENST00000373386 TJP1Q07157 1748 aa9.47□□□□□ -0.89
GARNL3-201ENST00000373386 SNRPA1P09661 255 aaKnown RBP9.47□□□□□ -0.89
GARNL3-201ENST00000373386 IMPDH2P12268 514 aa9.47□□□□□ -0.89
GARNL3-201ENST00000373386 CASTP20810 708 aaKnown RBP9.47□□□□□ -0.89
GARNL3-201ENST00000373386 EFCAB13Q8IY85 973 aa9.47□□□□□ -0.89
GARNL3-201ENST00000373386 PRPF38AQ8NAV1 312 aaKnown RBP9.47□□□□□ -0.89
GARNL3-201ENST00000373386 SPATA32Q96LK8 384 aa9.47□□□□□ -0.89
GARNL3-201ENST00000373386 SLX1AQ9BQ83 275 aa9.47□□□□□ -0.89
GARNL3-201ENST00000373386 FUCA2Q9BTY2 467 aa9.47□□□□□ -0.89
GARNL3-201ENST00000373386 GPR108Q9NPR9 543 aa9.47□□□□□ -0.89
GARNL3-201ENST00000373386 PUF60Q9UHX1 559 aaKnown RBP9.47□□□□□ -0.89
GARNL3-201ENST00000373386 CTNNA3Q9UI47 895 aa9.47□□□□□ -0.89
GARNL3-201ENST00000373386 FIBPO43427 364 aa9.46□□□□□ -0.89
GARNL3-201ENST00000373386 CREB3L3Q68CJ9 461 aa9.46□□□□□ -0.89
GARNL3-201ENST00000373386 SYT10Q6XYQ8 523 aa9.46□□□□□ -0.89
GARNL3-201ENST00000373386 IQCF2Q8IXL9 164 aa9.46□□□□□ -0.89
GARNL3-201ENST00000373386 TDRD7Q8NHU6 1098 aaKnown RBP9.46□□□□□ -0.89
GARNL3-201ENST00000373386 EAF2Q96CJ1 260 aaPredicted RBP9.46□□□□□ -0.89
GARNL3-201ENST00000373386 NEBLO76041 1014 aa9.46□□□□□ -0.9
GARNL3-201ENST00000373386 RFX5P48382 616 aaPredicted RBP9.46□□□□□ -0.9
GARNL3-201ENST00000373386 MCCD1P59942 119 aaPredicted RBP9.46□□□□□ -0.9
GARNL3-201ENST00000373386 PTH1RQ03431 593 aa9.46□□□□□ -0.9
GARNL3-201ENST00000373386 NCAPG2Q86XI2 1143 aa9.46□□□□□ -0.9
GARNL3-201ENST00000373386 MYLK4Q86YV6 388 aaPredicted RBP9.46□□□□□ -0.9
GARNL3-201ENST00000373386 SMCR8Q8TEV9 937 aaPredicted RBP9.46□□□□□ -0.9
GARNL3-201ENST00000373386 FAXDC2Q96IV6 333 aa9.46□□□□□ -0.9
GARNL3-201ENST00000373386 TTC12Q9H892 705 aaPredicted RBP9.46□□□□□ -0.9
GARNL3-201ENST00000373386 TRIM66O15016 1216 aa9.45□□□□□ -0.9
GARNL3-201ENST00000373386 KIF5CO60282 957 aa9.45□□□□□ -0.9
GARNL3-201ENST00000373386 CAPN15O75808 1086 aa9.45□□□□□ -0.9
GARNL3-201ENST00000373386 SMC2O95347 1197 aa9.45□□□□□ -0.9
GARNL3-201ENST00000373386 MAP4K4O95819 1239 aaPredicted RBP9.45□□□□□ -0.9
GARNL3-201ENST00000373386 CWF19L2Q2TBE0 894 aaKnown RBP9.45□□□□□ -0.9
GARNL3-201ENST00000373386 LSM14AQ8ND56 463 aaKnown RBP9.45□□□□□ -0.9
GARNL3-201ENST00000373386 MICAL1Q8TDZ2 1067 aa9.45□□□□□ -0.9
GARNL3-201ENST00000373386 CCDC34Q96HJ3 373 aa9.45□□□□□ -0.9
GARNL3-201ENST00000373386 MTMR6Q9Y217 621 aa9.45□□□□□ -0.9
GARNL3-201ENST00000373386 RBM8AQ9Y5S9 174 aaKnown RBP9.45□□□□□ -0.9
GARNL3-201ENST00000373386 PALLDQ8WX93 1383 aa9.45□□□□□ -0.9
GARNL3-201ENST00000373386 RBBP5Q15291 538 aaKnown RBP9.45□□□□□ -0.9
GARNL3-201ENST00000373386 SYCP1Q15431 976 aa9.45□□□□□ -0.9
GARNL3-201ENST00000373386 RIC3Q7Z5B4 369 aa9.45□□□□□ -0.9
GARNL3-201ENST00000373386 MORC4Q8TE76 937 aa9.45□□□□□ -0.9
GARNL3-201ENST00000373386 ATG3Q9NT62 314 aa9.45□□□□□ -0.9
GARNL3-201ENST00000373386 TPX2Q9ULW0 747 aaKnown RBP9.45□□□□□ -0.9
GARNL3-201ENST00000373386 XIRP1Q702N8 1843 aaKnown RBP9.45□□□□□ -0.9
GARNL3-201ENST00000373386 SLC27A2O14975 620 aa9.45□□□□□ -0.9
GARNL3-201ENST00000373386 JAKMIP1Q96N16 626 aaKnown RBP9.45□□□□□ -0.9
GARNL3-201ENST00000373386 CRACR2AQ9BSW2 395 aa9.45□□□□□ -0.9
GARNL3-201ENST00000373386 ZNF446Q9NWS9 450 aa9.45□□□□□ -0.9
GARNL3-201ENST00000373386 CCDC192P0DO97 292 aa9.44□□□□□ -0.9
GARNL3-201ENST00000373386 RPS6KB1P23443 525 aa9.44□□□□□ -0.9
GARNL3-201ENST00000373386 GJB2P29033 226 aa9.44□□□□□ -0.9
GARNL3-201ENST00000373386 NMIQ13287 307 aaPredicted RBP9.44□□□□□ -0.9
GARNL3-201ENST00000373386 TTLL5Q6EMB2 1281 aa9.44□□□□□ -0.9
GARNL3-201ENST00000373386 PRPF40BQ6NWY9 871 aaKnown RBP9.44□□□□□ -0.9
GARNL3-201ENST00000373386 ANKRD13DQ6ZTN6 518 aa9.44□□□□□ -0.9
GARNL3-201ENST00000373386 PLBD2Q8NHP8 589 aa9.44□□□□□ -0.9
GARNL3-201ENST00000373386 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.44□□□□□ -0.9
GARNL3-201ENST00000373386 JARID2Q92833 1246 aaPredicted RBP9.44□□□□□ -0.9
GARNL3-201ENST00000373386 SH3TC1Q8TE82 1336 aa9.44□□□□□ -0.9
GARNL3-201ENST00000373386 C21orf2O43822 256 aa9.44□□□□□ -0.9
GARNL3-201ENST00000373386 ANXA1P04083 346 aa9.44□□□□□ -0.9
GARNL3-201ENST00000373386 COPB2P35606 906 aa9.44□□□□□ -0.9
GARNL3-201ENST00000373386 RPS6KA3P51812 740 aa9.44□□□□□ -0.9
GARNL3-201ENST00000373386 CASP7P55210 303 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms