RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 NUP88Q99567 741 aaPredicted RBP15.89■□□□□ 0.13
RAPGEF1-202ENST00000372190 PRC1O43663 620 aa15.89■□□□□ 0.13
RAPGEF1-202ENST00000372190 IGSF3O75054 1194 aa15.89■□□□□ 0.13
RAPGEF1-202ENST00000372190 SLU7O95391 586 aaKnown RBP15.89■□□□□ 0.13
RAPGEF1-202ENST00000372190 NUF2Q9BZD4 464 aa15.89■□□□□ 0.13
RAPGEF1-202ENST00000372190 SH2B1Q9NRF2 756 aaPredicted RBP15.89■□□□□ 0.13
RAPGEF1-202ENST00000372190 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.89■□□□□ 0.13
RAPGEF1-202ENST00000372190 ARHGAP25P42331 645 aa15.89■□□□□ 0.13
RAPGEF1-202ENST00000372190 TMEM266Q2M3C6 531 aa15.89■□□□□ 0.13
RAPGEF1-202ENST00000372190 FERMT3Q86UX7 667 aa15.89■□□□□ 0.13
RAPGEF1-202ENST00000372190 FAF1Q9UNN5 650 aaPredicted RBP15.89■□□□□ 0.13
RAPGEF1-202ENST00000372190 ADCY5O95622 1261 aa15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 FLAD1Q8NFF5 587 aa15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 HELBQ8NG08 1087 aaPredicted RBP15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 CARD14Q9BXL6 1004 aa15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 SAMD9LQ8IVG5 1584 aa15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 CCDC194A0A1B0GVG4 234 aa15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 CTAGE5O15320 804 aa15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 KIF5AQ12840 1032 aa15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 ZNF335Q9H4Z2 1342 aaPredicted RBP15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 BAG4O95429 457 aaKnown RBP15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 PLCG2P16885 1265 aa15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 HAND2P61296 217 aa15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 CEP85LQ5SZL2 805 aa15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 INTS8Q75QN2 995 aaKnown RBP15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 RHPN1Q8TCX5 695 aa15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 ARHGAP45Q92619 1136 aa15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 NLRP1Q9C000 1473 aa15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 NOLC1Q14978 699 aaKnown RBP eCLIP15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 VTI1AQ96AJ9 217 aa15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 RAB34Q9BZG1 259 aa15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 ZEB2O60315 1214 aa15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 CWF19L2Q2TBE0 894 aaKnown RBP15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 LRRC23Q53EV4 343 aaPredicted RBP15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 TESK2Q96S53 571 aa15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 SELENOSQ9BQE4 189 aa15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 JADE2Q9NQC1 790 aa15.88■□□□□ 0.13
RAPGEF1-202ENST00000372190 MAGEB6P1A0A0J9YX57 407 aa15.87■□□□□ 0.13
RAPGEF1-202ENST00000372190 CTNNA2P26232 953 aa15.87■□□□□ 0.13
RAPGEF1-202ENST00000372190 GOLGA1Q92805 767 aa15.87■□□□□ 0.13
RAPGEF1-202ENST00000372190 ZNF408Q9H9D4 720 aa15.87■□□□□ 0.13
RAPGEF1-202ENST00000372190 STX8Q9UNK0 236 aa15.87■□□□□ 0.13
RAPGEF1-202ENST00000372190 CETN3O15182 167 aa15.87■□□□□ 0.13
RAPGEF1-202ENST00000372190 LDHBP07195 334 aaKnown RBP15.87■□□□□ 0.13
RAPGEF1-202ENST00000372190 SUPT20HQ8NEM7 779 aa15.87■□□□□ 0.13
RAPGEF1-202ENST00000372190 ZSWIM4Q9H7M6 989 aa15.87■□□□□ 0.13
RAPGEF1-202ENST00000372190 A6NNZ2 444 aa15.87■□□□□ 0.13
RAPGEF1-202ENST00000372190 KIAA0753Q2KHM9 967 aa15.87■□□□□ 0.13
RAPGEF1-202ENST00000372190 TUBB8Q3ZCM7 444 aa15.87■□□□□ 0.13
RAPGEF1-202ENST00000372190 LARGE2Q8N3Y3 721 aa15.87■□□□□ 0.13
RAPGEF1-202ENST00000372190 MRPL50Q8N5N7 158 aaKnown RBP15.87■□□□□ 0.13
RAPGEF1-202ENST00000372190 MRFAP1L1Q96HT8 127 aa15.87■□□□□ 0.13
RAPGEF1-202ENST00000372190 MEIS3Q99687 375 aa15.87■□□□□ 0.13
RAPGEF1-202ENST00000372190 PLEKHG3A1L390 1219 aa15.86■□□□□ 0.13
RAPGEF1-202ENST00000372190 TMCO4Q5TGY1 634 aa15.86■□□□□ 0.13
RAPGEF1-202ENST00000372190 TTC37Q6PGP7 1564 aa15.86■□□□□ 0.13
RAPGEF1-202ENST00000372190 TUBBP07437 444 aa15.86■□□□□ 0.13
RAPGEF1-202ENST00000372190 NCOA7Q8NI08 942 aa15.86■□□□□ 0.13
RAPGEF1-202ENST00000372190 PHACTR3Q96KR7 559 aa15.86■□□□□ 0.13
RAPGEF1-202ENST00000372190 PLBD2Q8NHP8 589 aa15.86■□□□□ 0.13
RAPGEF1-202ENST00000372190 USP6NLQ92738 828 aa15.86■□□□□ 0.13
RAPGEF1-202ENST00000372190 GGA1Q9UJY5 639 aa15.86■□□□□ 0.13
RAPGEF1-202ENST00000372190 PLS1Q14651 629 aa15.86■□□□□ 0.13
RAPGEF1-202ENST00000372190 MTUS1Q9ULD2 1270 aa15.86■□□□□ 0.13
RAPGEF1-202ENST00000372190 MLH3Q9UHC1 1453 aa15.86■□□□□ 0.13
RAPGEF1-202ENST00000372190 DPP8Q6V1X1 898 aaPredicted RBP15.85■□□□□ 0.13
RAPGEF1-202ENST00000372190 TMC6Q7Z403 805 aa15.85■□□□□ 0.13
RAPGEF1-202ENST00000372190 SEC62Q99442 399 aaKnown RBP15.85■□□□□ 0.13
RAPGEF1-202ENST00000372190 PHAXQ9H814 394 aaKnown RBP15.85■□□□□ 0.13
RAPGEF1-202ENST00000372190 COG7P83436 770 aa15.85■□□□□ 0.13
RAPGEF1-202ENST00000372190 CCDC92Q53HC0 331 aaPredicted RBP15.85■□□□□ 0.13
RAPGEF1-202ENST00000372190 DDX21Q9NR30 783 aaKnown RBP eCLIP15.85■□□□□ 0.13
RAPGEF1-202ENST00000372190 MACROD2A1Z1Q3 448 aa15.85■□□□□ 0.13
RAPGEF1-202ENST00000372190 FGFR1OPO95684 399 aaKnown RBP15.85■□□□□ 0.13
RAPGEF1-202ENST00000372190 CCDC144CPQ8IYA2 1237 aa15.85■□□□□ 0.13
RAPGEF1-202ENST00000372190 C8orf76Q96K31 380 aa15.85■□□□□ 0.13
RAPGEF1-202ENST00000372190 SH3TC1Q8TE82 1336 aa15.85■□□□□ 0.13
RAPGEF1-202ENST00000372190 PEX19P40855 299 aa15.85■□□□□ 0.13
RAPGEF1-202ENST00000372190 IFI16Q16666 785 aaKnown RBP15.85■□□□□ 0.13
RAPGEF1-202ENST00000372190 CCDC170Q8IYT3 715 aa15.85■□□□□ 0.13
RAPGEF1-202ENST00000372190 JAG2Q9Y219 1238 aa15.85■□□□□ 0.13
RAPGEF1-202ENST00000372190 ALDH3A1P30838 453 aa15.85■□□□□ 0.13
RAPGEF1-202ENST00000372190 XAB2Q9HCS7 855 aaKnown RBP15.85■□□□□ 0.13
RAPGEF1-202ENST00000372190 RASAL2Q9UJF2 1139 aa15.85■□□□□ 0.13
RAPGEF1-202ENST00000372190 TPX2Q9ULW0 747 aaKnown RBP15.85■□□□□ 0.13
RAPGEF1-202ENST00000372190 CCDC172P0C7W6 258 aa15.84■□□□□ 0.13
RAPGEF1-202ENST00000372190 ECM2O94769 699 aaPredicted RBP15.84■□□□□ 0.13
RAPGEF1-202ENST00000372190 SLMAPQ14BN4 828 aa15.84■□□□□ 0.13
RAPGEF1-202ENST00000372190 KRT23Q9C075 422 aa15.84■□□□□ 0.13
RAPGEF1-202ENST00000372190 HCLS1P14317 486 aaPredicted RBP15.84■□□□□ 0.13
RAPGEF1-202ENST00000372190 TDRD12Q587J7 1177 aaKnown RBP15.84■□□□□ 0.13
RAPGEF1-202ENST00000372190 SLC9C2Q5TAH2 1124 aa15.84■□□□□ 0.13
RAPGEF1-202ENST00000372190 FAM89AQ96GI7 184 aa15.84■□□□□ 0.13
RAPGEF1-202ENST00000372190 TSG101Q99816 390 aa15.84■□□□□ 0.13
RAPGEF1-202ENST00000372190 BCS1LQ9Y276 419 aa15.84■□□□□ 0.13
RAPGEF1-202ENST00000372190 ERVV-2B6SEH9 535 aa15.84■□□□□ 0.13
RAPGEF1-202ENST00000372190 SAMM50Q9Y512 469 aa15.84■□□□□ 0.13
RAPGEF1-202ENST00000372190 KDM5CP41229 1560 aa15.84■□□□□ 0.13
RAPGEF1-202ENST00000372190 TRAF1Q13077 416 aa15.84■□□□□ 0.13
RAPGEF1-202ENST00000372190 SOS1Q07889 1333 aaPredicted RBP15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms