RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 NOP2P46087 812 aaKnown RBP16.76■□□□□ 0.27
NDC1-201ENST00000371429 GSDMDP57764 484 aa16.76■□□□□ 0.27
NDC1-201ENST00000371429 TAF3Q5VWG9 929 aa16.76■□□□□ 0.27
NDC1-201ENST00000371429 FCHSD1Q86WN1 690 aa16.76■□□□□ 0.27
NDC1-201ENST00000371429 TRIM37O94972 964 aa16.76■□□□□ 0.27
NDC1-201ENST00000371429 DTHD1Q6ZMT9 781 aa16.76■□□□□ 0.27
NDC1-201ENST00000371429 OTUD7AQ8TE49 926 aaPredicted RBP16.76■□□□□ 0.27
NDC1-201ENST00000371429 TMCO5BA8MYB1 307 aa16.76■□□□□ 0.27
NDC1-201ENST00000371429 FAM13AO94988 1023 aa16.76■□□□□ 0.27
NDC1-201ENST00000371429 DNM1Q05193 864 aaKnown RBP16.76■□□□□ 0.27
NDC1-201ENST00000371429 GIMAP6Q6P9H5 292 aa16.76■□□□□ 0.27
NDC1-201ENST00000371429 C2CD5Q86YS7 1000 aa16.76■□□□□ 0.27
NDC1-201ENST00000371429 PLXNC1O60486 1568 aa16.76■□□□□ 0.27
NDC1-201ENST00000371429 ABCA8O94911 1581 aa16.76■□□□□ 0.27
NDC1-201ENST00000371429 GSTTP1A0A1W2PQM5 241 aa16.76■□□□□ 0.27
NDC1-201ENST00000371429 IMPG2Q9BZV3 1241 aa16.76■□□□□ 0.27
NDC1-201ENST00000371429 MAGI3Q5TCQ9 1506 aa16.75■□□□□ 0.27
NDC1-201ENST00000371429 URI1O94763 535 aaPredicted RBP16.75■□□□□ 0.27
NDC1-201ENST00000371429 ZAP70P43403 619 aa16.75■□□□□ 0.27
NDC1-201ENST00000371429 MAPKAPK5Q8IW41 473 aa16.75■□□□□ 0.27
NDC1-201ENST00000371429 TSPYL1Q9H0U9 437 aa16.75■□□□□ 0.27
NDC1-201ENST00000371429 ERBB4Q15303 1308 aa16.75■□□□□ 0.27
NDC1-201ENST00000371429 AKR1B10O60218 316 aa16.75■□□□□ 0.27
NDC1-201ENST00000371429 SPAG1Q07617 926 aa16.75■□□□□ 0.27
NDC1-201ENST00000371429 MFSD14BQ5SR56 506 aa16.75■□□□□ 0.27
NDC1-201ENST00000371429 USPL1Q5W0Q7 1092 aa16.75■□□□□ 0.27
NDC1-201ENST00000371429 MAP3K9P80192 1104 aa16.75■□□□□ 0.27
NDC1-201ENST00000371429 HS2ST1Q7LGA3 356 aa16.75■□□□□ 0.27
NDC1-201ENST00000371429 MAP7D2Q96T17 732 aa16.75■□□□□ 0.27
NDC1-201ENST00000371429 NAP1L4Q99733 375 aaKnown RBP16.75■□□□□ 0.27
NDC1-201ENST00000371429 SLC1A4P43007 532 aa16.74■□□□□ 0.27
NDC1-201ENST00000371429 BRAPQ7Z569 592 aa16.74■□□□□ 0.27
NDC1-201ENST00000371429 KIF18AQ8NI77 898 aa16.74■□□□□ 0.27
NDC1-201ENST00000371429 ASAP1Q9ULH1 1129 aa16.74■□□□□ 0.27
NDC1-201ENST00000371429 KDM5DQ9BY66 1539 aa16.74■□□□□ 0.27
NDC1-201ENST00000371429 NEMFO60524 1076 aa16.74■□□□□ 0.27
NDC1-201ENST00000371429 KLHL40Q2TBA0 621 aa16.74■□□□□ 0.27
NDC1-201ENST00000371429 EAPPQ56P03 285 aaPredicted RBP16.74■□□□□ 0.27
NDC1-201ENST00000371429 ZSCAN30Q86W11 494 aa16.74■□□□□ 0.27
NDC1-201ENST00000371429 TBC1D5Q92609 795 aa16.74■□□□□ 0.27
NDC1-201ENST00000371429 CNKSR1Q969H4 720 aa16.74■□□□□ 0.27
NDC1-201ENST00000371429 ALS2CR12Q96Q35 445 aa16.74■□□□□ 0.27
NDC1-201ENST00000371429 SYNCQ9H7C4 482 aa16.74■□□□□ 0.27
NDC1-201ENST00000371429 DACT1Q9NYF0 836 aa16.74■□□□□ 0.27
NDC1-201ENST00000371429 PKD2L1Q9P0L9 805 aa16.74■□□□□ 0.27
NDC1-201ENST00000371429 TTF2Q9UNY4 1162 aaKnown RBP16.74■□□□□ 0.27
NDC1-201ENST00000371429 LETM2Q2VYF4 491 aa16.74■□□□□ 0.27
NDC1-201ENST00000371429 BEGAINQ9BUH8 593 aa16.74■□□□□ 0.27
NDC1-201ENST00000371429 NDUFB9Q9Y6M9 179 aa16.74■□□□□ 0.27
NDC1-201ENST00000371429 DPY19L2Q6NUT2 758 aa16.74■□□□□ 0.27
NDC1-201ENST00000371429 ROBO2Q9HCK4 1378 aa16.73■□□□□ 0.27
NDC1-201ENST00000371429 FAM182BQ5T319 152 aa16.73■□□□□ 0.27
NDC1-201ENST00000371429 ZBTB38Q8NAP3 1195 aaPredicted RBP16.73■□□□□ 0.27
NDC1-201ENST00000371429 ZNF532Q9HCE3 1301 aa16.73■□□□□ 0.27
NDC1-201ENST00000371429 CPA1P15085 419 aa16.73■□□□□ 0.27
NDC1-201ENST00000371429 CASQ1P31415 396 aa16.73■□□□□ 0.27
NDC1-201ENST00000371429 USP48Q86UV5 1035 aa16.73■□□□□ 0.27
NDC1-201ENST00000371429 TGFBRAP1Q8WUH2 860 aa16.73■□□□□ 0.27
NDC1-201ENST00000371429 SNX21Q969T3 373 aa16.73■□□□□ 0.27
NDC1-201ENST00000371429 ANGEL1Q9UNK9 670 aaKnown RBP16.73■□□□□ 0.27
NDC1-201ENST00000371429 WDR17Q8IZU2 1322 aa16.73■□□□□ 0.27
NDC1-201ENST00000371429 CRKLP46109 303 aaKnown RBP16.73■□□□□ 0.27
NDC1-201ENST00000371429 KRT27Q7Z3Y8 459 aa16.73■□□□□ 0.27
NDC1-201ENST00000371429 HOOK3Q86VS8 718 aa16.73■□□□□ 0.27
NDC1-201ENST00000371429 TEKT1Q969V4 418 aa16.73■□□□□ 0.27
NDC1-201ENST00000371429 FAM227BQ96M60 508 aa16.73■□□□□ 0.27
NDC1-201ENST00000371429 EZRP15311 586 aaKnown RBP16.73■□□□□ 0.27
NDC1-201ENST00000371429 TRMT1Q9NXH9 659 aaKnown RBP16.73■□□□□ 0.27
NDC1-201ENST00000371429 BRDTQ58F21 947 aaPredicted RBP16.72■□□□□ 0.27
NDC1-201ENST00000371429 HSP90AA4PQ58FG1 418 aa16.72■□□□□ 0.27
NDC1-201ENST00000371429 USP26Q9BXU7 913 aa16.72■□□□□ 0.27
NDC1-201ENST00000371429 PRPF4BQ13523 1007 aaKnown RBP16.72■□□□□ 0.27
NDC1-201ENST00000371429 TNFAIP1Q13829 316 aa16.72■□□□□ 0.27
NDC1-201ENST00000371429 LEKR1Q6ZMV7 388 aa16.72■□□□□ 0.27
NDC1-201ENST00000371429 ARHGAP27Q6ZUM4 889 aa16.72■□□□□ 0.27
NDC1-201ENST00000371429 CPXCR1Q8N123 301 aa16.72■□□□□ 0.27
NDC1-201ENST00000371429 FAM212AQ96EL1 285 aa16.72■□□□□ 0.27
NDC1-201ENST00000371429 CTAGE1Q96RT6 745 aa16.72■□□□□ 0.27
NDC1-201ENST00000371429 AOX1Q06278 1338 aa16.72■□□□□ 0.27
NDC1-201ENST00000371429 PCCAP05165 728 aaPredicted RBP16.72■□□□□ 0.27
NDC1-201ENST00000371429 ATP2B4P23634 1241 aa16.72■□□□□ 0.27
NDC1-201ENST00000371429 CCDC97Q96F63 343 aaPredicted RBP16.72■□□□□ 0.27
NDC1-201ENST00000371429 USP40Q9NVE5 1235 aa16.72■□□□□ 0.27
NDC1-201ENST00000371429 V9GY48 417 aaPredicted RBP16.72■□□□□ 0.27
NDC1-201ENST00000371429 PPM1FP49593 454 aaPredicted RBP16.71■□□□□ 0.27
NDC1-201ENST00000371429 UBASH3AP57075 661 aa16.71■□□□□ 0.27
NDC1-201ENST00000371429 GBP3Q9H0R5 595 aa16.71■□□□□ 0.27
NDC1-201ENST00000371429 TSPOAP1O95153 1857 aa16.71■□□□□ 0.27
NDC1-201ENST00000371429 SLC27A2O14975 620 aa16.71■□□□□ 0.27
NDC1-201ENST00000371429 DEXIO95424 95 aa16.71■□□□□ 0.27
NDC1-201ENST00000371429 CCDC102AQ96A19 550 aa16.71■□□□□ 0.27
NDC1-201ENST00000371429 CRACR2AQ9BSW2 395 aa16.71■□□□□ 0.27
NDC1-201ENST00000371429 CWC15Q9P013 229 aaKnown RBP16.71■□□□□ 0.27
NDC1-201ENST00000371429 FAM135BQ49AJ0 1406 aa16.71■□□□□ 0.27
NDC1-201ENST00000371429 MAP3K15Q6ZN16 1313 aa16.71■□□□□ 0.27
NDC1-201ENST00000371429 RPS6KB1P23443 525 aa16.71■□□□□ 0.27
NDC1-201ENST00000371429 NOD1Q9Y239 953 aa16.71■□□□□ 0.27
NDC1-201ENST00000371429 IBTKQ9P2D0 1353 aaPredicted RBP16.71■□□□□ 0.26
NDC1-201ENST00000371429 IQUBQ8NA54 791 aa16.71■□□□□ 0.26
NDC1-201ENST00000371429 GLT8D2Q9H1C3 349 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms