RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 CTBSQ01459 385 aa4.67□□□□□ -1.66
MCF2-202ENST00000370573 LARP1Q6PKG0 1096 aaKnown RBP4.67□□□□□ -1.66
MCF2-202ENST00000370573 GIPC2Q8TF65 315 aa4.67□□□□□ -1.66
MCF2-202ENST00000370573 ACDQ96AP0 544 aa4.67□□□□□ -1.66
MCF2-202ENST00000370573 HINFPQ9BQA5 517 aa4.67□□□□□ -1.66
MCF2-202ENST00000370573 BCL2L13Q9BXK5 485 aa4.67□□□□□ -1.66
MCF2-202ENST00000370573 CRISPLD1Q9H336 500 aa4.67□□□□□ -1.66
MCF2-202ENST00000370573 BLMP54132 1417 aaPredicted RBP4.67□□□□□ -1.66
MCF2-202ENST00000370573 IQSEC2Q5JU85 1478 aa4.67□□□□□ -1.66
MCF2-202ENST00000370573 AHDC1Q5TGY3 1603 aaPredicted RBP4.67□□□□□ -1.66
MCF2-202ENST00000370573 CRYBG1Q9Y4K1 1723 aa4.67□□□□□ -1.66
MCF2-202ENST00000370573 FLT4P35916 1363 aa4.67□□□□□ -1.66
MCF2-202ENST00000370573 LRRC59Q96AG4 307 aaKnown RBP4.67□□□□□ -1.66
MCF2-202ENST00000370573 HCN2Q9UL51 889 aa4.67□□□□□ -1.66
MCF2-202ENST00000370573 NUDCQ9Y266 331 aa4.67□□□□□ -1.66
MCF2-202ENST00000370573 GJA3Q9Y6H8 435 aa4.67□□□□□ -1.66
MCF2-202ENST00000370573 KIF24Q5T7B8 1368 aa4.66□□□□□ -1.66
MCF2-202ENST00000370573 C2CD2LO14523 706 aa4.66□□□□□ -1.66
MCF2-202ENST00000370573 DPYDQ12882 1025 aa4.66□□□□□ -1.66
MCF2-202ENST00000370573 LRRC69Q6ZNQ3 347 aa4.66□□□□□ -1.66
MCF2-202ENST00000370573 SIX5Q8N196 739 aa4.66□□□□□ -1.66
MCF2-202ENST00000370573 LTV1Q96GA3 475 aaPredicted RBP4.66□□□□□ -1.66
MCF2-202ENST00000370573 PLEKHF1Q96S99 279 aa4.66□□□□□ -1.66
MCF2-202ENST00000370573 ZIC5Q96T25 663 aa4.66□□□□□ -1.66
MCF2-202ENST00000370573 LTN1O94822 1766 aa4.66□□□□□ -1.66
MCF2-202ENST00000370573 SERTM1A2A2V5 107 aa4.66□□□□□ -1.66
MCF2-202ENST00000370573 APAF1O14727 1248 aa4.66□□□□□ -1.66
MCF2-202ENST00000370573 KHNYNO15037 678 aaKnown RBP4.66□□□□□ -1.66
MCF2-202ENST00000370573 HMOX1P09601 288 aa4.66□□□□□ -1.66
MCF2-202ENST00000370573 TCF3P15923 654 aa4.66□□□□□ -1.66
MCF2-202ENST00000370573 ARID4AP29374 1257 aaPredicted RBP4.66□□□□□ -1.66
MCF2-202ENST00000370573 MAP3K10Q02779 954 aa4.66□□□□□ -1.66
MCF2-202ENST00000370573 PTK7Q13308 1070 aa4.66□□□□□ -1.66
MCF2-202ENST00000370573 CHRNA2Q15822 529 aa4.66□□□□□ -1.66
MCF2-202ENST00000370573 B4GALNT3Q6L9W6 998 aa4.66□□□□□ -1.66
MCF2-202ENST00000370573 NPAS4Q8IUM7 802 aa4.66□□□□□ -1.66
MCF2-202ENST00000370573 RUNDC1Q96C34 613 aa4.66□□□□□ -1.66
MCF2-202ENST00000370573 CFHR5Q9BXR6 569 aa4.66□□□□□ -1.66
MCF2-202ENST00000370573 PHF24Q9UPV7 400 aa4.66□□□□□ -1.66
MCF2-202ENST00000370573 COL16A1Q07092 1604 aaPredicted RBP4.66□□□□□ -1.66
MCF2-202ENST00000370573 PHRF1Q9P1Y6 1649 aaKnown RBP4.66□□□□□ -1.66
MCF2-202ENST00000370573 COL18A1P39060 1754 aa4.66□□□□□ -1.66
MCF2-202ENST00000370573 RTL1A6NKG5 1358 aa4.66□□□□□ -1.66
MCF2-202ENST00000370573 KIAA0232Q92628 1395 aa4.66□□□□□ -1.66
MCF2-202ENST00000370573 ATXN7O15265 892 aaPredicted RBP4.65□□□□□ -1.66
MCF2-202ENST00000370573 C21orf2O43822 256 aa4.65□□□□□ -1.66
MCF2-202ENST00000370573 ARHGEF15O94989 841 aa4.65□□□□□ -1.66
MCF2-202ENST00000370573 HMGB1P09429 215 aaKnown RBP4.65□□□□□ -1.66
MCF2-202ENST00000370573 BMP4P12644 408 aa4.65□□□□□ -1.66
MCF2-202ENST00000370573 CD33P20138 364 aa4.65□□□□□ -1.66
MCF2-202ENST00000370573 FGFR3P22607 806 aa4.65□□□□□ -1.66
MCF2-202ENST00000370573 SEC13P55735 322 aa4.65□□□□□ -1.66
MCF2-202ENST00000370573 TEAD4Q15561 434 aa4.65□□□□□ -1.66
MCF2-202ENST00000370573 NBPF6Q5VWK0 638 aa4.65□□□□□ -1.66
MCF2-202ENST00000370573 SCG3Q8WXD2 468 aaKnown RBP4.65□□□□□ -1.66
MCF2-202ENST00000370573 PHACTR3Q96KR7 559 aa4.65□□□□□ -1.66
MCF2-202ENST00000370573 NBPF4Q96M43 638 aa4.65□□□□□ -1.66
MCF2-202ENST00000370573 ATXN7L1Q9ULK2 861 aaPredicted RBP4.65□□□□□ -1.66
MCF2-202ENST00000370573 PCDHGC4Q9Y5F7 938 aa4.65□□□□□ -1.66
MCF2-202ENST00000370573 PHLPP1O60346 1717 aa4.65□□□□□ -1.66
MCF2-202ENST00000370573 CPDO75976 1380 aa4.65□□□□□ -1.66
MCF2-202ENST00000370573 ZBED9Q6R2W3 1325 aa4.65□□□□□ -1.67
MCF2-202ENST00000370573 ANKRD33BA6NCL7 494 aa4.65□□□□□ -1.67
MCF2-202ENST00000370573 FAM83GA6ND36 823 aa4.65□□□□□ -1.67
MCF2-202ENST00000370573 PPP1R12BO60237 982 aaPredicted RBP4.65□□□□□ -1.67
MCF2-202ENST00000370573 MAPTP10636 758 aaKnown RBP4.65□□□□□ -1.67
MCF2-202ENST00000370573 PRKAR2BP31323 418 aa4.65□□□□□ -1.67
MCF2-202ENST00000370573 SULT6B1Q6IMI4 303 aa4.65□□□□□ -1.67
MCF2-202ENST00000370573 TCP11L2Q8N4U5 519 aa4.65□□□□□ -1.67
MCF2-202ENST00000370573 NEDD1Q8NHV4 660 aa4.65□□□□□ -1.67
MCF2-202ENST00000370573 C1orf216Q8TAB5 229 aa4.65□□□□□ -1.67
MCF2-202ENST00000370573 NGLY1Q96IV0 654 aa4.65□□□□□ -1.67
MCF2-202ENST00000370573 NDFIP2Q9NV92 336 aa4.65□□□□□ -1.67
MCF2-202ENST00000370573 RRP7AQ9Y3A4 280 aaKnown RBP4.65□□□□□ -1.67
MCF2-202ENST00000370573 RGPD1P0DJD0 1748 aa4.65□□□□□ -1.67
MCF2-202ENST00000370573 IGSF1Q8N6C5 1336 aa4.65□□□□□ -1.67
MCF2-202ENST00000370573 RGPD5Q99666 1765 aa4.65□□□□□ -1.67
MCF2-202ENST00000370573 USP17L15C9J2P7 530 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 USP17L10C9JJH3 530 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 USP17L13C9JLJ4 530 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 USP17L12C9JPN9 530 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 USP17L11C9JVI0 530 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 USP17L21D6R901 530 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 USP17L18D6R9N7 530 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 USP17L22D6RA61 530 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 USP17L17D6RBQ6 530 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 USP17L19D6RCP7 530 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 USP17L20D6RJB6 530 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 EML1O00423 815 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 MARSP56192 900 aaKnown RBP4.64□□□□□ -1.67
MCF2-202ENST00000370573 USP17L24Q0WX57 530 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 LBRQ14739 615 aaKnown RBP4.64□□□□□ -1.67
MCF2-202ENST00000370573 C1orf229Q6ZS94 237 aaPredicted RBP4.64□□□□□ -1.67
MCF2-202ENST00000370573 USHBP1Q8N6Y0 703 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 ANKRD24Q8TF21 1146 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 OXCT2Q9BYC2 517 aaPredicted RBP4.64□□□□□ -1.67
MCF2-202ENST00000370573 ZDHHC3Q9NYG2 299 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 NSFL1CQ9UNZ2 370 aaKnown RBP4.64□□□□□ -1.67
MCF2-202ENST00000370573 ABCA3Q99758 1704 aa4.64□□□□□ -1.67
MCF2-202ENST00000370573 ZNF521Q96K83 1311 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms