RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 WWC1Q8IX03 1113 aa19.62■□□□□ 0.73
SSR4-204ENST00000370087 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.62■□□□□ 0.732e-7■□□□□ 8.1
SSR4-204ENST00000370087 TTF2Q9UNY4 1162 aaKnown RBP19.62■□□□□ 0.73
SSR4-204ENST00000370087 GYG1P46976 350 aa19.61■□□□□ 0.73
SSR4-204ENST00000370087 TDRD7Q8NHU6 1098 aaKnown RBP19.61■□□□□ 0.73
SSR4-204ENST00000370087 SH3TC2Q8TF17 1288 aa19.61■□□□□ 0.73
SSR4-204ENST00000370087 OTUD5Q96G74 571 aa19.61■□□□□ 0.73
SSR4-204ENST00000370087 TMEM106CQ9BVX2 250 aa19.61■□□□□ 0.73
SSR4-204ENST00000370087 FANCIQ9NVI1 1328 aa19.6■□□□□ 0.73
SSR4-204ENST00000370087 BEND3Q5T5X7 828 aa19.6■□□□□ 0.73
SSR4-204ENST00000370087 DZIP1LQ8IYY4 767 aaKnown RBP19.6■□□□□ 0.73
SSR4-204ENST00000370087 ZFYVE28Q9HCC9 887 aa19.6■□□□□ 0.73
SSR4-204ENST00000370087 SERPINA10Q9UK55 444 aa19.6■□□□□ 0.73
SSR4-204ENST00000370087 CRKP46108 304 aa19.59■□□□□ 0.73
SSR4-204ENST00000370087 TNFAIP1Q13829 316 aa19.59■□□□□ 0.73
SSR4-204ENST00000370087 CCDC27Q2M243 656 aa19.59■□□□□ 0.73
SSR4-204ENST00000370087 LDHAL6AQ6ZMR3 332 aa19.59■□□□□ 0.73
SSR4-204ENST00000370087 H0YGN5 161 aa19.58■□□□□ 0.72
SSR4-204ENST00000370087 GTF2A2P52657 109 aa19.58■□□□□ 0.72
SSR4-204ENST00000370087 CACNB3P54284 484 aa19.58■□□□□ 0.72
SSR4-204ENST00000370087 SLC4A8Q2Y0W8 1093 aa19.58■□□□□ 0.72
SSR4-204ENST00000370087 FAM84BQ96KN1 310 aaPredicted RBP19.58■□□□□ 0.72
SSR4-204ENST00000370087 CNNM1Q9NRU3 951 aa19.58■□□□□ 0.72
SSR4-204ENST00000370087 SNCAIPQ9Y6H5 919 aa19.58■□□□□ 0.72
SSR4-204ENST00000370087 RANBP2P49792 3224 aaKnown RBP19.58■□□□□ 0.72
SSR4-204ENST00000370087 CEP290O15078 2479 aa19.58■□□□□ 0.72
SSR4-204ENST00000370087 MAP3K9P80192 1104 aa19.57■□□□□ 0.72
SSR4-204ENST00000370087 PUS3Q9BZE2 481 aaKnown RBP19.57■□□□□ 0.72
SSR4-204ENST00000370087 IL16Q14005 1332 aa19.56■□□□□ 0.72
SSR4-204ENST00000370087 TRIOBPQ9H2D6 2365 aa19.56■□□□□ 0.72
SSR4-204ENST00000370087 SPDYE5A6NIY4 337 aa19.56■□□□□ 0.72
SSR4-204ENST00000370087 VAMP4O75379 141 aa19.56■□□□□ 0.72
SSR4-204ENST00000370087 ECM2O94769 699 aaPredicted RBP19.56■□□□□ 0.72
SSR4-204ENST00000370087 CTGFP29279 349 aa19.56■□□□□ 0.72
SSR4-204ENST00000370087 CCDC57Q2TAC2 916 aa19.56■□□□□ 0.72
SSR4-204ENST00000370087 TAF7LQ5H9L4 462 aa19.56■□□□□ 0.72
SSR4-204ENST00000370087 NBPF11Q86T75 865 aa19.56■□□□□ 0.72
SSR4-204ENST00000370087 SHISA4Q96DD7 197 aa19.56■□□□□ 0.72
SSR4-204ENST00000370087 IQSEC3Q9UPP2 1182 aaPredicted RBP19.56■□□□□ 0.72
SSR4-204ENST00000370087 BTBD19C9JJ37 291 aa19.55■□□□□ 0.72
SSR4-204ENST00000370087 GRM8O00222 908 aa19.55■□□□□ 0.72
SSR4-204ENST00000370087 HIBADHP31937 336 aaKnown RBP19.55■□□□□ 0.72
SSR4-204ENST00000370087 LACTBP83111 547 aaPredicted RBP19.55■□□□□ 0.72
SSR4-204ENST00000370087 CSADQ9Y600 493 aa19.55■□□□□ 0.72
SSR4-204ENST00000370087 TLR2O60603 784 aa19.54■□□□□ 0.72
SSR4-204ENST00000370087 UBE4AQ14139 1066 aa19.54■□□□□ 0.72
SSR4-204ENST00000370087 ZKSCAN4Q969J2 545 aaPredicted RBP19.54■□□□□ 0.72
SSR4-204ENST00000370087 KAZALD1Q96I82 304 aa19.54■□□□□ 0.72
SSR4-204ENST00000370087 MYH13Q9UKX3 1938 aa19.53■□□□□ 0.72
SSR4-204ENST00000370087 EXOSC9Q06265 439 aaKnown RBP19.53■□□□□ 0.72
SSR4-204ENST00000370087 MTFR1Q15390 333 aa19.53■□□□□ 0.72
SSR4-204ENST00000370087 WRNIP1Q96S55 665 aa19.53■□□□□ 0.72
SSR4-204ENST00000370087 MGAMO43451 1857 aa19.52■□□□□ 0.72
SSR4-204ENST00000370087 IRF6O14896 467 aa19.52■□□□□ 0.72
SSR4-204ENST00000370087 TNNI2P48788 182 aa19.52■□□□□ 0.72
SSR4-204ENST00000370087 CHAF1AQ13111 956 aaPredicted RBP19.52■□□□□ 0.72
SSR4-204ENST00000370087 ARHGEF6Q15052 776 aa19.52■□□□□ 0.72
SSR4-204ENST00000370087 CHRDL2Q6WN34 429 aa19.52■□□□□ 0.72
SSR4-204ENST00000370087 SUCLG2Q96I99 432 aa19.52■□□□□ 0.72
SSR4-204ENST00000370087 CETPP11597 493 aa19.51■□□□□ 0.71
SSR4-204ENST00000370087 FBXO33Q7Z6M2 555 aa19.51■□□□□ 0.71
SSR4-204ENST00000370087 ERO1BQ86YB8 467 aa19.51■□□□□ 0.71
SSR4-204ENST00000370087 RIPOR2Q9Y4F9 1068 aa19.5■□□□□ 0.71
SSR4-204ENST00000370087 ADGRA2Q96PE1 1338 aa19.5■□□□□ 0.71
SSR4-204ENST00000370087 PPIL2Q13356 520 aa19.49■□□□□ 0.71
SSR4-204ENST00000370087 SNAPC2Q13487 334 aa19.49■□□□□ 0.71
SSR4-204ENST00000370087 C17orf99Q6UX52 265 aa19.49■□□□□ 0.71
SSR4-204ENST00000370087 TRIM47Q96LD4 638 aa19.49■□□□□ 0.71
SSR4-204ENST00000370087 ZCCHC17Q9NP64 241 aaKnown RBP19.49■□□□□ 0.71
SSR4-204ENST00000370087 SPINK5Q9NQ38 1064 aaPredicted RBP19.49■□□□□ 0.71
SSR4-204ENST00000370087 RBM27Q9P2N5 1060 aaKnown RBP19.49■□□□□ 0.71
SSR4-204ENST00000370087 CPA4Q9UI42 421 aa19.49■□□□□ 0.71
SSR4-204ENST00000370087 KIF22Q14807 665 aa19.48■□□□□ 0.71
SSR4-204ENST00000370087 LRRC24Q50LG9 513 aa19.48■□□□□ 0.71
SSR4-204ENST00000370087 APOBEC3HQ6NTF7 200 aaKnown RBP19.48■□□□□ 0.71
SSR4-204ENST00000370087 TEKT1Q969V4 418 aa19.48■□□□□ 0.71
SSR4-204ENST00000370087 SALL2Q9Y467 1007 aaPredicted RBP19.48■□□□□ 0.71
SSR4-204ENST00000370087 RPAP1Q9BWH6 1393 aaPredicted RBP19.47■□□□□ 0.71
SSR4-204ENST00000370087 INPP5BP32019 993 aa19.47■□□□□ 0.71
SSR4-204ENST00000370087 HDLBPQ00341 1268 aaKnown RBP19.47■□□□□ 0.71
SSR4-204ENST00000370087 UBE2Q1Q7Z7E8 422 aa19.47■□□□□ 0.71
SSR4-204ENST00000370087 VGLL2Q8N8G2 317 aa19.47■□□□□ 0.71
SSR4-204ENST00000370087 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.47■□□□□ 0.71
SSR4-204ENST00000370087 ZDHHC15Q96MV8 337 aa19.47■□□□□ 0.71
SSR4-204ENST00000370087 C9orf78Q9NZ63 289 aaPredicted RBP19.47■□□□□ 0.71
SSR4-204ENST00000370087 NBPF7P0C2Y1 421 aaPredicted RBP19.46■□□□□ 0.71
SSR4-204ENST00000370087 OSBPP22059 807 aa19.46■□□□□ 0.71
SSR4-204ENST00000370087 MOGSQ13724 837 aa19.46■□□□□ 0.71
SSR4-204ENST00000370087 SLC4A10Q6U841 1118 aa19.46■□□□□ 0.71
SSR4-204ENST00000370087 MIGA2Q7L4E1 593 aa19.46■□□□□ 0.71
SSR4-204ENST00000370087 FAM83AQ86UY5 434 aa19.46■□□□□ 0.71
SSR4-204ENST00000370087 SRRDQ9UH36 339 aa19.46■□□□□ 0.71
SSR4-204ENST00000370087 MROH5Q6ZUA9 1318 aa19.46■□□□□ 0.71
SSR4-204ENST00000370087 AK9Q5TCS8 1911 aa19.45■□□□□ 0.7
SSR4-204ENST00000370087 ALDH1L1O75891 902 aa19.45■□□□□ 0.7
SSR4-204ENST00000370087 GNRH1P01148 92 aa19.45■□□□□ 0.7
SSR4-204ENST00000370087 PSMC4P43686 418 aa19.45■□□□□ 0.7
SSR4-204ENST00000370087 BCAMP50895 628 aa19.45■□□□□ 0.7
SSR4-204ENST00000370087 VPS37DQ86XT2 251 aa19.45■□□□□ 0.7
SSR4-204ENST00000370087 BICC1Q9H694 974 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms