RNA–Protein interactions for RNA: ENST00000369937.4

CUEDC2-201, Transcript of CUE domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC2, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2-201ENST00000369937 ZNF70Q9UC06 446 aaPredicted RBP25.39■■□□□ 1.66
CUEDC2-201ENST00000369937 MAST3O60307 1309 aa25.38■■□□□ 1.65
CUEDC2-201ENST00000369937 HDLBPQ00341 1268 aaKnown RBP25.38■■□□□ 1.65
CUEDC2-201ENST00000369937 MKRN3Q13064 507 aaKnown RBP25.38■■□□□ 1.65
CUEDC2-201ENST00000369937 ATP2B3Q16720 1220 aa25.38■■□□□ 1.65
CUEDC2-201ENST00000369937 SPDYE2Q495Y8 402 aa25.38■■□□□ 1.65
CUEDC2-201ENST00000369937 ATF7IPQ6VMQ6 1270 aa25.38■■□□□ 1.65
CUEDC2-201ENST00000369937 SLC10A4Q96EP9 437 aa25.38■■□□□ 1.65
CUEDC2-201ENST00000369937 GNL3LQ9NVN8 582 aaKnown RBP25.38■■□□□ 1.65
CUEDC2-201ENST00000369937 AKAP11Q9UKA4 1901 aa25.37■■□□□ 1.65
CUEDC2-201ENST00000369937 BCAR3O75815 825 aa25.37■■□□□ 1.65
CUEDC2-201ENST00000369937 SREBF2Q12772 1141 aa25.37■■□□□ 1.65
CUEDC2-201ENST00000369937 LDLRAD1Q5T700 205 aa25.37■■□□□ 1.65
CUEDC2-201ENST00000369937 FZD1Q9UP38 647 aa25.37■■□□□ 1.65
CUEDC2-201ENST00000369937 SUGT1Q9Y2Z0 365 aa25.37■■□□□ 1.65
CUEDC2-201ENST00000369937 ARAP2Q8WZ64 1704 aa25.37■■□□□ 1.65
CUEDC2-201ENST00000369937 TRIM27P14373 513 aa25.36■■□□□ 1.65
CUEDC2-201ENST00000369937 IREB2P48200 963 aaKnown RBP25.36■■□□□ 1.65
CUEDC2-201ENST00000369937 NBPF12Q5TAG4 269 aaPredicted RBP25.36■■□□□ 1.65
CUEDC2-201ENST00000369937 WDR66Q8TBY9 1149 aa25.36■■□□□ 1.65
CUEDC2-201ENST00000369937 TMOD2Q9NZR1 351 aa25.36■■□□□ 1.65
CUEDC2-201ENST00000369937 UNCXA6NJT0 531 aa25.35■■□□□ 1.65
CUEDC2-201ENST00000369937 SRGAP3O43295 1099 aa25.35■■□□□ 1.65
CUEDC2-201ENST00000369937 DGKZQ13574 1117 aa25.35■■□□□ 1.65
CUEDC2-201ENST00000369937 GRIK5Q16478 980 aa25.35■■□□□ 1.65
CUEDC2-201ENST00000369937 MAP3K11Q16584 847 aa25.35■■□□□ 1.65
CUEDC2-201ENST00000369937 COPRSQ9NQ92 184 aa25.35■■□□□ 1.65
CUEDC2-201ENST00000369937 PA2G4Q9UQ80 394 aaKnown RBP25.35■■□□□ 1.65
CUEDC2-201ENST00000369937 AOX1Q06278 1338 aa25.35■■□□□ 1.65
CUEDC2-201ENST00000369937 TCP10L2B9ZVM9 353 aa25.34■■□□□ 1.65
CUEDC2-201ENST00000369937 CLUAP1Q96AJ1 413 aa25.34■■□□□ 1.65
CUEDC2-201ENST00000369937 MRIQ9BWK5 157 aa25.34■■□□□ 1.65
CUEDC2-201ENST00000369937 CASP8AP2Q9UKL3 1982 aa25.33■■□□□ 1.65
CUEDC2-201ENST00000369937 TM4SF4P48230 202 aa25.33■■□□□ 1.65
CUEDC2-201ENST00000369937 SPRYD7Q5W111 196 aa25.33■■□□□ 1.65
CUEDC2-201ENST00000369937 ZKSCAN2Q63HK3 967 aa25.33■■□□□ 1.65
CUEDC2-201ENST00000369937 MCOLN1Q9GZU1 580 aa25.33■■□□□ 1.65
CUEDC2-201ENST00000369937 GNAI2P04899 355 aa25.32■■□□□ 1.64
CUEDC2-201ENST00000369937 ZDHHC15Q96MV8 337 aa25.32■■□□□ 1.64
CUEDC2-201ENST00000369937 CCDC85CA6NKD9 419 aa25.31■■□□□ 1.64
CUEDC2-201ENST00000369937 ANKRD13AQ8IZ07 590 aa25.31■■□□□ 1.64
CUEDC2-201ENST00000369937 ZBTB48P10074 688 aaPredicted RBP25.3■■□□□ 1.64
CUEDC2-201ENST00000369937 INHBEP58166 350 aa25.3■■□□□ 1.64
CUEDC2-201ENST00000369937 DENND2AQ9ULE3 1009 aa25.3■■□□□ 1.64
CUEDC2-201ENST00000369937 AKAP2Q9Y2D5 859 aa25.3■■□□□ 1.64
CUEDC2-201ENST00000369937 SSC5DA1L4H1 1573 aa25.3■■□□□ 1.64
CUEDC2-201ENST00000369937 MANSC4A6NHS7 340 aaPredicted RBP25.29■■□□□ 1.64
CUEDC2-201ENST00000369937 SEMA3EO15041 775 aa25.29■■□□□ 1.64
CUEDC2-201ENST00000369937 USP2O75604 605 aaPredicted RBP25.29■■□□□ 1.64
CUEDC2-201ENST00000369937 TBC1D8O95759 1140 aa25.29■■□□□ 1.64
CUEDC2-201ENST00000369937 MTX1Q13505 466 aa25.29■■□□□ 1.64
CUEDC2-201ENST00000369937 HHIPL2Q6UWX4 724 aa25.29■■□□□ 1.64
CUEDC2-201ENST00000369937 CLMNQ96JQ2 1002 aa25.29■■□□□ 1.64
CUEDC2-201ENST00000369937 TMEM39BQ9GZU3 492 aa25.29■■□□□ 1.64
CUEDC2-201ENST00000369937 FTSJ3Q8IY81 847 aaKnown RBP25.28■■□□□ 1.64
CUEDC2-201ENST00000369937 TNNQ9UQP3 1299 aa25.28■■□□□ 1.64
CUEDC2-201ENST00000369937 ALDH1A1P00352 501 aa25.27■■□□□ 1.64
CUEDC2-201ENST00000369937 LDHBP07195 334 aaKnown RBP25.27■■□□□ 1.64
CUEDC2-201ENST00000369937 CACNB3P54284 484 aa25.27■■□□□ 1.64
CUEDC2-201ENST00000369937 HOOK2Q96ED9 719 aa25.27■■□□□ 1.64
CUEDC2-201ENST00000369937 WNK4Q96J92 1243 aa25.27■■□□□ 1.64
CUEDC2-201ENST00000369937 MYH13Q9UKX3 1938 aa25.27■■□□□ 1.64
CUEDC2-201ENST00000369937 PHKA1P46020 1223 aa25.26■■□□□ 1.63
CUEDC2-201ENST00000369937 TIMM10P62072 90 aa25.26■■□□□ 1.63
CUEDC2-201ENST00000369937 CCDC102BQ68D86 513 aa25.26■■□□□ 1.63
CUEDC2-201ENST00000369937 APOBEC3HQ6NTF7 200 aaKnown RBP25.26■■□□□ 1.63
CUEDC2-201ENST00000369937 ZGPATQ8N5A5 531 aaKnown RBP25.26■■□□□ 1.63
CUEDC2-201ENST00000369937 TMEM57Q8N5G2 664 aa25.26■■□□□ 1.63
CUEDC2-201ENST00000369937 TEPSINQ96N21 525 aa25.26■■□□□ 1.63
CUEDC2-201ENST00000369937 TFCP2Q12800 502 aa25.25■■□□□ 1.63
CUEDC2-201ENST00000369937 G3BP1Q13283 466 aaKnown RBP eCLIP25.25■■□□□ 1.63
CUEDC2-201ENST00000369937 FKBP1CQ5VVH2 108 aa25.25■■□□□ 1.63
CUEDC2-201ENST00000369937 FAM83AQ86UY5 434 aa25.25■■□□□ 1.63
CUEDC2-201ENST00000369937 A0A1B0GUL7 405 aa25.24■■□□□ 1.63
CUEDC2-201ENST00000369937 ADORA1P30542 326 aa25.24■■□□□ 1.63
CUEDC2-201ENST00000369937 OTUD7BQ6GQQ9 843 aa25.24■■□□□ 1.63
CUEDC2-201ENST00000369937 CTU1Q7Z7A3 348 aaKnown RBP25.24■■□□□ 1.63
CUEDC2-201ENST00000369937 NEUROD6Q96NK8 337 aa25.24■■□□□ 1.63
CUEDC2-201ENST00000369937 ELP3Q9H9T3 547 aa25.24■■□□□ 1.63
CUEDC2-201ENST00000369937 CSADQ9Y600 493 aa25.24■■□□□ 1.63
CUEDC2-201ENST00000369937 SALL1Q9NSC2 1324 aa25.23■■□□□ 1.63
CUEDC2-201ENST00000369937 PRDX5P30044 214 aa25.23■■□□□ 1.63
CUEDC2-201ENST00000369937 MVPQ14764 893 aaKnown RBP25.23■■□□□ 1.63
CUEDC2-201ENST00000369937 GORABQ5T7V8 394 aa25.23■■□□□ 1.63
CUEDC2-201ENST00000369937 CDAN1Q8IWY9 1227 aa25.23■■□□□ 1.63
CUEDC2-201ENST00000369937 ZBED9Q6R2W3 1325 aa25.22■■□□□ 1.63
CUEDC2-201ENST00000369937 MAP3K9P80192 1104 aa25.22■■□□□ 1.63
CUEDC2-201ENST00000369937 IFNL1Q8IU54 200 aa25.22■■□□□ 1.63
CUEDC2-201ENST00000369937 ZNF296Q8WUU4 475 aaPredicted RBP25.22■■□□□ 1.63
CUEDC2-201ENST00000369937 XAGE2Q96GT9 111 aa25.22■■□□□ 1.63
CUEDC2-201ENST00000369937 GPR25O00155 361 aa25.21■■□□□ 1.63
CUEDC2-201ENST00000369937 DIXDC1Q155Q3 683 aa25.21■■□□□ 1.63
CUEDC2-201ENST00000369937 OPTNQ96CV9 577 aa25.21■■□□□ 1.63
CUEDC2-201ENST00000369937 ABCF2Q9UG63 623 aa25.21■■□□□ 1.63
CUEDC2-201ENST00000369937 DAGLAQ9Y4D2 1042 aa25.21■■□□□ 1.63
CUEDC2-201ENST00000369937 PNMA6EA0A0J9YXQ4 647 aa25.2■■□□□ 1.62
CUEDC2-201ENST00000369937 DCAF15Q66K64 600 aa25.2■■□□□ 1.62
CUEDC2-201ENST00000369937 SPTY2D1Q68D10 685 aaPredicted RBP25.2■■□□□ 1.62
CUEDC2-201ENST00000369937 DZIP1Q86YF9 867 aaKnown RBP25.2■■□□□ 1.62
CUEDC2-201ENST00000369937 ITPRIPQ8IWB1 547 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms