RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 ADARB2Q9NS39 739 aaKnown RBP8.37□□□□□ -1.07
CSDE1-204ENST00000369530 PPP1R1BQ9UD71 204 aaPredicted RBP8.37□□□□□ -1.07
CSDE1-204ENST00000369530 PCDHAC2Q9Y5I4 1007 aa8.37□□□□□ -1.07
CSDE1-204ENST00000369530 APLP1P51693 650 aa8.37□□□□□ -1.07
CSDE1-204ENST00000369530 SAMD1Q6SPF0 538 aaPredicted RBP8.37□□□□□ -1.07
CSDE1-204ENST00000369530 BICDL1Q6ZP65 573 aa8.37□□□□□ -1.07
CSDE1-204ENST00000369530 KLRG1Q96E93 195 aa8.37□□□□□ -1.07
CSDE1-204ENST00000369530 DDX58O95786 925 aaKnown RBP8.37□□□□□ -1.07
CSDE1-204ENST00000369530 MCM5P33992 734 aa8.37□□□□□ -1.07
CSDE1-204ENST00000369530 PDE3AQ14432 1141 aa8.37□□□□□ -1.07
CSDE1-204ENST00000369530 SH3BP5LQ7L8J4 393 aa8.37□□□□□ -1.07
CSDE1-204ENST00000369530 MCM4P33991 863 aa8.36□□□□□ -1.07
CSDE1-204ENST00000369530 MPNDQ8N594 471 aa8.36□□□□□ -1.07
CSDE1-204ENST00000369530 SRCIN1Q9C0H9 1055 aa8.36□□□□□ -1.07
CSDE1-204ENST00000369530 CHADLQ6NUI6 762 aa8.36□□□□□ -1.07
CSDE1-204ENST00000369530 EYSQ5T1H1 3165 aa8.36□□□□□ -1.07
CSDE1-204ENST00000369530 PRUNE2Q8WUY3 3088 aa8.36□□□□□ -1.07
CSDE1-204ENST00000369530 SAPCD2Q86UD0 394 aa8.36□□□□□ -1.07
CSDE1-204ENST00000369530 ZNF594Q96JF6 807 aaPredicted RBP8.36□□□□□ -1.07
CSDE1-204ENST00000369530 ZDHHC15Q96MV8 337 aa8.36□□□□□ -1.07
CSDE1-204ENST00000369530 GPR101Q96P66 508 aaPredicted RBP8.36□□□□□ -1.07
CSDE1-204ENST00000369530 SERPINA10Q9UK55 444 aa8.36□□□□□ -1.07
CSDE1-204ENST00000369530 MYO3BQ8WXR4 1341 aa8.35□□□□□ -1.07
CSDE1-204ENST00000369530 SNAP23O00161 211 aa8.35□□□□□ -1.07
CSDE1-204ENST00000369530 SLC4A3P48751 1232 aa8.35□□□□□ -1.07
CSDE1-204ENST00000369530 SPDYE2Q495Y8 402 aa8.35□□□□□ -1.07
CSDE1-204ENST00000369530 LMBR1LQ6UX01 489 aa8.35□□□□□ -1.07
CSDE1-204ENST00000369530 JARID2Q92833 1246 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-204ENST00000369530 BCL2L13Q9BXK5 485 aa8.35□□□□□ -1.07
CSDE1-204ENST00000369530 EYA2O00167 538 aa8.35□□□□□ -1.07
CSDE1-204ENST00000369530 ELL2O00472 640 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-204ENST00000369530 GJA5P36382 358 aa8.35□□□□□ -1.07
CSDE1-204ENST00000369530 AIMP1Q12904 312 aaKnown RBP8.35□□□□□ -1.07
CSDE1-204ENST00000369530 GPR162Q16538 588 aa8.35□□□□□ -1.07
CSDE1-204ENST00000369530 EPHX2P34913 555 aa8.35□□□□□ -1.07
CSDE1-204ENST00000369530 PSEN1P49768 467 aa8.35□□□□□ -1.07
CSDE1-204ENST00000369530 GMPSP49915 693 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-204ENST00000369530 NOL9Q5SY16 702 aaKnown RBP8.35□□□□□ -1.07
CSDE1-204ENST00000369530 TMED8Q6PL24 325 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-204ENST00000369530 ARHGAP27Q6ZUM4 889 aa8.35□□□□□ -1.07
CSDE1-204ENST00000369530 RIC3Q7Z5B4 369 aa8.35□□□□□ -1.07
CSDE1-204ENST00000369530 IDI2Q9BXS1 227 aa8.35□□□□□ -1.07
CSDE1-204ENST00000369530 WNT10BO00744 389 aa8.34□□□□□ -1.07
CSDE1-204ENST00000369530 VEGFAP15692 232 aaPredicted RBP8.34□□□□□ -1.07
CSDE1-204ENST00000369530 KCNA4P22459 653 aa8.34□□□□□ -1.07
CSDE1-204ENST00000369530 TICAM2Q86XR7 235 aa8.34□□□□□ -1.07
CSDE1-204ENST00000369530 ANKRD2Q9GZV1 360 aa8.34□□□□□ -1.07
CSDE1-204ENST00000369530 TULP2O00295 520 aa8.34□□□□□ -1.07
CSDE1-204ENST00000369530 SEMA3EO15041 775 aa8.34□□□□□ -1.07
CSDE1-204ENST00000369530 DDIT3P35638 169 aa8.34□□□□□ -1.07
CSDE1-204ENST00000369530 MVPQ14764 893 aaKnown RBP8.34□□□□□ -1.07
CSDE1-204ENST00000369530 ADGRA1Q86SQ6 560 aa8.34□□□□□ -1.07
CSDE1-204ENST00000369530 SMC1BQ8NDV3 1235 aa8.34□□□□□ -1.07
CSDE1-204ENST00000369530 SPDYE2BA6NHP3 402 aa8.34□□□□□ -1.08
CSDE1-204ENST00000369530 SPDYE6P0CI01 402 aa8.34□□□□□ -1.08
CSDE1-204ENST00000369530 SCARF1Q14162 830 aa8.34□□□□□ -1.08
CSDE1-204ENST00000369530 BECN1Q14457 450 aa8.34□□□□□ -1.08
CSDE1-204ENST00000369530 CSPP1Q1MSJ5 1256 aa8.34□□□□□ -1.08
CSDE1-204ENST00000369530 MS4A4AQ96JQ5 239 aa8.34□□□□□ -1.08
CSDE1-204ENST00000369530 WBP1LQ9NX94 342 aa8.34□□□□□ -1.08
CSDE1-204ENST00000369530 KIAA1217Q5T5P2 1943 aa8.34□□□□□ -1.08
CSDE1-204ENST00000369530 CRBNQ96SW2 442 aa8.33□□□□□ -1.08
CSDE1-204ENST00000369530 NOL7Q9UMY1 257 aaKnown RBP8.33□□□□□ -1.08
CSDE1-204ENST00000369530 CDH23Q9H251 3354 aa8.33□□□□□ -1.08
CSDE1-204ENST00000369530 IRX3P78415 501 aaPredicted RBP8.33□□□□□ -1.08
CSDE1-204ENST00000369530 HHIPL2Q6UWX4 724 aa8.33□□□□□ -1.08
CSDE1-204ENST00000369530 PDLIM2Q96JY6 352 aa8.33□□□□□ -1.08
CSDE1-204ENST00000369530 SZT2Q5T011 3432 aa8.33□□□□□ -1.08
CSDE1-204ENST00000369530 PLIN4Q96Q06 1357 aa8.33□□□□□ -1.08
CSDE1-204ENST00000369530 TM4SF4P48230 202 aa8.33□□□□□ -1.08
CSDE1-204ENST00000369530 SASS6Q6UVJ0 657 aa8.33□□□□□ -1.08
CSDE1-204ENST00000369530 DDX46Q7L014 1031 aaKnown RBP8.33□□□□□ -1.08
CSDE1-204ENST00000369530 CLUAP1Q96AJ1 413 aa8.33□□□□□ -1.08
CSDE1-204ENST00000369530 DNAJC2Q99543 621 aaKnown RBP8.33□□□□□ -1.08
CSDE1-204ENST00000369530 MXD3Q9BW11 206 aa8.33□□□□□ -1.08
CSDE1-204ENST00000369530 API5Q9BZZ5 524 aaKnown RBP8.33□□□□□ -1.08
CSDE1-204ENST00000369530 TANC1Q9C0D5 1861 aa8.33□□□□□ -1.08
CSDE1-204ENST00000369530 FAM198AQ9UFP1 575 aa8.33□□□□□ -1.08
CSDE1-204ENST00000369530 HACL1Q9UJ83 578 aa8.33□□□□□ -1.08
CSDE1-204ENST00000369530 PPP2R3BQ9Y5P8 575 aa8.33□□□□□ -1.08
CSDE1-204ENST00000369530 SLC10A3P09131 477 aa8.32□□□□□ -1.08
CSDE1-204ENST00000369530 PTMSP20962 102 aa8.32□□□□□ -1.08
CSDE1-204ENST00000369530 FAM193AP78312 1265 aa8.32□□□□□ -1.08
CSDE1-204ENST00000369530 DPP8Q6V1X1 898 aaPredicted RBP8.32□□□□□ -1.08
CSDE1-204ENST00000369530 RPGRQ92834 1020 aaKnown RBP8.32□□□□□ -1.08
CSDE1-204ENST00000369530 CDC5LQ99459 802 aaKnown RBP8.32□□□□□ -1.08
CSDE1-204ENST00000369530 TBC1D12O60347 775 aa8.32□□□□□ -1.08
CSDE1-204ENST00000369530 RGS19P49795 217 aa8.32□□□□□ -1.08
CSDE1-204ENST00000369530 PPP4CP60510 307 aa8.32□□□□□ -1.08
CSDE1-204ENST00000369530 WASHC4Q2M389 1173 aa8.32□□□□□ -1.08
CSDE1-204ENST00000369530 AXDND1Q5T1B0 1012 aaPredicted RBP8.32□□□□□ -1.08
CSDE1-204ENST00000369530 PNMA8AQ86V59 439 aaPredicted RBP8.32□□□□□ -1.08
CSDE1-204ENST00000369530 ANKRD18AQ8IVF6 992 aa8.32□□□□□ -1.08
CSDE1-204ENST00000369530 KLHDC4Q8TBB5 520 aa8.32□□□□□ -1.08
CSDE1-204ENST00000369530 PI4K2BQ8TCG2 481 aa8.32□□□□□ -1.08
CSDE1-204ENST00000369530 MYOZ2Q9NPC6 264 aa8.32□□□□□ -1.08
CSDE1-204ENST00000369530 GEMIN8Q9NWZ8 242 aaKnown RBP8.32□□□□□ -1.08
CSDE1-204ENST00000369530 COL4A6Q14031 1691 aa8.32□□□□□ -1.08
CSDE1-204ENST00000369530 FGRP09769 529 aa8.32□□□□□ -1.08
CSDE1-204ENST00000369530 RBM25P49756 843 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms