RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 HNRNPLLQ8WVV9 542 aaKnown RBP12.13□□□□□ -0.47
LYSMD1-201ENST00000368908 ERCC4Q92889 916 aaPredicted RBP12.13□□□□□ -0.47
LYSMD1-201ENST00000368908 BICC1Q9H694 974 aaKnown RBP12.13□□□□□ -0.47
LYSMD1-201ENST00000368908 TUBE1Q9UJT0 475 aa12.13□□□□□ -0.47
LYSMD1-201ENST00000368908 SIPA1L3O60292 1781 aaPredicted RBP12.13□□□□□ -0.47
LYSMD1-201ENST00000368908 HEG1Q9ULI3 1381 aa12.13□□□□□ -0.47
LYSMD1-201ENST00000368908 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.13□□□□□ -0.47
LYSMD1-201ENST00000368908 POTEB2H3BUK9 544 aa12.13□□□□□ -0.47
LYSMD1-201ENST00000368908 TNNT3P45378 269 aaPredicted RBP12.13□□□□□ -0.47
LYSMD1-201ENST00000368908 NOP2P46087 812 aaKnown RBP12.13□□□□□ -0.47
LYSMD1-201ENST00000368908 UBASH3AP57075 661 aa12.13□□□□□ -0.47
LYSMD1-201ENST00000368908 MYL5Q02045 173 aa12.13□□□□□ -0.47
LYSMD1-201ENST00000368908 PARD6BQ9BYG5 372 aa12.13□□□□□ -0.47
LYSMD1-201ENST00000368908 RSPH14Q9UHP6 348 aa12.13□□□□□ -0.47
LYSMD1-201ENST00000368908 ADAM21Q9UKJ8 722 aa12.13□□□□□ -0.47
LYSMD1-201ENST00000368908 PALLDQ8WX93 1383 aa12.12□□□□□ -0.47
LYSMD1-201ENST00000368908 PLEKHG2Q9H7P9 1386 aa12.12□□□□□ -0.47
LYSMD1-201ENST00000368908 SPTLC2O15270 562 aa12.12□□□□□ -0.47
LYSMD1-201ENST00000368908 ZNF202O95125 648 aa12.12□□□□□ -0.47
LYSMD1-201ENST00000368908 CMA1P23946 247 aa12.12□□□□□ -0.47
LYSMD1-201ENST00000368908 TXLNAP40222 546 aa12.12□□□□□ -0.47
LYSMD1-201ENST00000368908 TUBB4BP68371 445 aa12.12□□□□□ -0.47
LYSMD1-201ENST00000368908 APOBRQ0VD83 1088 aa12.12□□□□□ -0.47
LYSMD1-201ENST00000368908 SF3A1Q15459 793 aaKnown RBP12.12□□□□□ -0.47
LYSMD1-201ENST00000368908 FBXW7Q969H0 707 aa12.12□□□□□ -0.47
LYSMD1-201ENST00000368908 KIFC2Q96AC6 838 aa12.12□□□□□ -0.47
LYSMD1-201ENST00000368908 DSCC1Q9BVC3 393 aa12.12□□□□□ -0.47
LYSMD1-201ENST00000368908 UTP14AQ9BVJ6 771 aaKnown RBP12.12□□□□□ -0.47
LYSMD1-201ENST00000368908 RRP15Q9Y3B9 282 aaKnown RBP12.12□□□□□ -0.47
LYSMD1-201ENST00000368908 NUTM2BA6NNL0 878 aaPredicted RBP12.12□□□□□ -0.47
LYSMD1-201ENST00000368908 NUTM2EB1AL46 878 aaPredicted RBP12.12□□□□□ -0.47
LYSMD1-201ENST00000368908 TOP1P11387 765 aaKnown RBP12.12□□□□□ -0.47
LYSMD1-201ENST00000368908 LMOD1P29536 600 aaPredicted RBP12.12□□□□□ -0.47
LYSMD1-201ENST00000368908 LONRF2Q1L5Z9 754 aa12.12□□□□□ -0.47
LYSMD1-201ENST00000368908 NUTM2AQ8IVF1 878 aaPredicted RBP12.12□□□□□ -0.47
LYSMD1-201ENST00000368908 GOLGA6L1Q8N7Z2 621 aa12.12□□□□□ -0.47
LYSMD1-201ENST00000368908 SPEF2Q9C093 1822 aa12.11□□□□□ -0.47
LYSMD1-201ENST00000368908 STX10O60499 249 aa12.11□□□□□ -0.47
LYSMD1-201ENST00000368908 FOSBP53539 338 aa12.11□□□□□ -0.47
LYSMD1-201ENST00000368908 IRX3P78415 501 aaPredicted RBP12.11□□□□□ -0.47
LYSMD1-201ENST00000368908 TBX2Q13207 712 aaPredicted RBP12.11□□□□□ -0.47
LYSMD1-201ENST00000368908 NOM1Q5C9Z4 860 aaKnown RBP12.11□□□□□ -0.47
LYSMD1-201ENST00000368908 MEX3CQ5U5Q3 659 aaKnown RBP12.11□□□□□ -0.47
LYSMD1-201ENST00000368908 ZCCHC17Q9NP64 241 aaKnown RBP12.11□□□□□ -0.47
LYSMD1-201ENST00000368908 NRAPQ86VF7 1730 aa12.11□□□□□ -0.47
LYSMD1-201ENST00000368908 DDX58O95786 925 aaKnown RBP12.11□□□□□ -0.47
LYSMD1-201ENST00000368908 ANXA1P04083 346 aa12.11□□□□□ -0.47
LYSMD1-201ENST00000368908 PDIA3P30101 505 aaKnown RBP12.11□□□□□ -0.47
LYSMD1-201ENST00000368908 USP5P45974 858 aa12.11□□□□□ -0.47
LYSMD1-201ENST00000368908 TUBB2AQ13885 445 aa12.11□□□□□ -0.47
LYSMD1-201ENST00000368908 CWF19L2Q2TBE0 894 aaKnown RBP12.11□□□□□ -0.47
LYSMD1-201ENST00000368908 PLCD3Q8N3E9 789 aa12.11□□□□□ -0.47
LYSMD1-201ENST00000368908 CCDC34Q96HJ3 373 aa12.11□□□□□ -0.47
LYSMD1-201ENST00000368908 HAUS7Q99871 368 aa12.11□□□□□ -0.47
LYSMD1-201ENST00000368908 TUBB2BQ9BVA1 445 aa12.11□□□□□ -0.47
LYSMD1-201ENST00000368908 LRRC2Q9BYS8 371 aa12.11□□□□□ -0.47
LYSMD1-201ENST00000368908 SIL1Q9H173 461 aa12.11□□□□□ -0.47
LYSMD1-201ENST00000368908 CLIC4Q9Y696 253 aa12.11□□□□□ -0.47
LYSMD1-201ENST00000368908 SLIT2O94813 1529 aa12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 FAM237AA0A1B0GTK4 181 aa12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 H3BQF6 201 aa12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 DHX16O60231 1041 aaKnown RBP12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 SERPINC1P01008 464 aa12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 GCP02774 474 aa12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 ATP1A3P13637 1013 aa12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 LMAN1P49257 510 aa12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 AXDND1Q5T1B0 1012 aaPredicted RBP12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 LEKR1Q6ZMV7 388 aa12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 CABLES1Q8TDN4 633 aa12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 DPF2Q92785 391 aa12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 COPRSQ9NQ92 184 aa12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 HELLSQ9NRZ9 838 aa12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 COL18A1P39060 1754 aa12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 BIN1O00499 593 aa12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 PFKFB1P16118 471 aa12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 GNG11P61952 73 aa12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 CFAP100Q494V2 611 aa12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 MYSM1Q5VVJ2 828 aa12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 C10orf67Q8IYJ2 551 aa12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 FMNL2Q96PY5 1086 aa12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 WDR24Q96S15 920 aa12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 LCMT1Q9UIC8 334 aa12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 DBNLQ9UJU6 430 aaKnown RBP12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 RAB21Q9UL25 225 aa12.1□□□□□ -0.47
LYSMD1-201ENST00000368908 C4AP0C0L4 1744 aa12.09□□□□□ -0.47
LYSMD1-201ENST00000368908 C4BP0C0L5 1744 aa12.09□□□□□ -0.47
LYSMD1-201ENST00000368908 BTBD11A6QL63 1104 aa12.09□□□□□ -0.47
LYSMD1-201ENST00000368908 KCNQ3O43525 872 aa12.09□□□□□ -0.47
LYSMD1-201ENST00000368908 EIF3JO75822 258 aaKnown RBP12.09□□□□□ -0.47
LYSMD1-201ENST00000368908 FDPSP14324 419 aaKnown RBP12.09□□□□□ -0.47
LYSMD1-201ENST00000368908 TEFQ10587 303 aa12.09□□□□□ -0.47
LYSMD1-201ENST00000368908 GNL2Q13823 731 aaKnown RBP12.09□□□□□ -0.47
LYSMD1-201ENST00000368908 TNNI3KQ59H18 835 aa12.09□□□□□ -0.47
LYSMD1-201ENST00000368908 CCDC129Q6ZRS4 1044 aa12.09□□□□□ -0.47
LYSMD1-201ENST00000368908 EDC3Q96F86 508 aaKnown RBP12.09□□□□□ -0.47
LYSMD1-201ENST00000368908 SEC62Q99442 399 aaKnown RBP12.09□□□□□ -0.47
LYSMD1-201ENST00000368908 BAG1Q99933 345 aaPredicted RBP12.09□□□□□ -0.47
LYSMD1-201ENST00000368908 FPGT-TNNI3KV9GXZ4 949 aa12.09□□□□□ -0.47
LYSMD1-201ENST00000368908 ADAMTS7Q9UKP4 1686 aa12.09□□□□□ -0.47
LYSMD1-201ENST00000368908 CCT2P78371 535 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms