RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 MAP2K2P36507 400 aa10.8□□□□□ -0.68
SNX27-201ENST00000368838 SCARF1Q14162 830 aa10.8□□□□□ -0.68
SNX27-201ENST00000368838 ANGEL2Q5VTE6 544 aaKnown RBP10.8□□□□□ -0.68
SNX27-201ENST00000368838 RSBN1LQ6PCB5 846 aaPredicted RBP10.8□□□□□ -0.68
SNX27-201ENST00000368838 TICAM2Q86XR7 235 aa10.8□□□□□ -0.68
SNX27-201ENST00000368838 TTLL11Q8NHH1 800 aa10.8□□□□□ -0.68
SNX27-201ENST00000368838 KIF1BPQ96EK5 621 aa10.8□□□□□ -0.68
SNX27-201ENST00000368838 GBA2Q9HCG7 927 aaPredicted RBP10.8□□□□□ -0.68
SNX27-201ENST00000368838 STAP2Q9UGK3 403 aa10.8□□□□□ -0.68
SNX27-201ENST00000368838 SRGAP3O43295 1099 aa10.79□□□□□ -0.68
SNX27-201ENST00000368838 CSF1RP07333 972 aa10.79□□□□□ -0.68
SNX27-201ENST00000368838 ATP2B4P23634 1241 aa10.79□□□□□ -0.68
SNX27-201ENST00000368838 KLRK1P26718 216 aa10.79□□□□□ -0.68
SNX27-201ENST00000368838 ANKRD45Q5TZF3 282 aa10.79□□□□□ -0.68
SNX27-201ENST00000368838 PRAMEF18Q5VWM3 479 aa10.79□□□□□ -0.68
SNX27-201ENST00000368838 IFNL1Q8IU54 200 aa10.79□□□□□ -0.68
SNX27-201ENST00000368838 SULF1Q8IWU6 871 aa10.79□□□□□ -0.68
SNX27-201ENST00000368838 HOMEZQ8IX15 550 aa10.79□□□□□ -0.68
SNX27-201ENST00000368838 CDCA5Q96FF9 252 aa10.79□□□□□ -0.68
SNX27-201ENST00000368838 SUCLG2Q96I99 432 aa10.79□□□□□ -0.68
SNX27-201ENST00000368838 CDC5LQ99459 802 aaKnown RBP10.79□□□□□ -0.68
SNX27-201ENST00000368838 LRRCC1Q9C099 1032 aa10.79□□□□□ -0.68
SNX27-201ENST00000368838 FAM155AB1AL88 458 aaPredicted RBP10.78□□□□□ -0.68
SNX27-201ENST00000368838 USP17L8P0C7I0 530 aa10.78□□□□□ -0.68
SNX27-201ENST00000368838 RFX5P48382 616 aaPredicted RBP10.78□□□□□ -0.68
SNX27-201ENST00000368838 ZNF157P51786 506 aaPredicted RBP10.78□□□□□ -0.68
SNX27-201ENST00000368838 KIF23Q02241 960 aaPredicted RBP10.78□□□□□ -0.68
SNX27-201ENST00000368838 C8orf34Q49A92 452 aa10.78□□□□□ -0.68
SNX27-201ENST00000368838 RGMBQ6NW40 437 aa10.78□□□□□ -0.68
SNX27-201ENST00000368838 MOB2Q70IA6 237 aa10.78□□□□□ -0.68
SNX27-201ENST00000368838 TXNRD3Q86VQ6 643 aa10.78□□□□□ -0.68
SNX27-201ENST00000368838 C2orf69Q8N8R5 385 aa10.78□□□□□ -0.68
SNX27-201ENST00000368838 GPR108Q9NPR9 543 aa10.78□□□□□ -0.68
SNX27-201ENST00000368838 MINPP1Q9UNW1 487 aa10.78□□□□□ -0.68
SNX27-201ENST00000368838 PAPPA2Q9BXP8 1791 aa10.78□□□□□ -0.68
SNX27-201ENST00000368838 USP17L3A6NCW0 530 aa10.77□□□□□ -0.69
SNX27-201ENST00000368838 USP17L4A6NCW7 530 aa10.77□□□□□ -0.69
SNX27-201ENST00000368838 ZNF280AP59817 542 aaPredicted RBP10.77□□□□□ -0.69
SNX27-201ENST00000368838 FOXO4P98177 505 aa10.77□□□□□ -0.69
SNX27-201ENST00000368838 NOGQ13253 232 aa10.77□□□□□ -0.69
SNX27-201ENST00000368838 NBPF9Q3BBW0 867 aa10.77□□□□□ -0.69
SNX27-201ENST00000368838 USP17L1Q7RTZ2 530 aa10.77□□□□□ -0.69
SNX27-201ENST00000368838 PLEKHM2Q8IWE5 1019 aa10.77□□□□□ -0.69
SNX27-201ENST00000368838 HHIPL1Q96JK4 782 aa10.77□□□□□ -0.69
SNX27-201ENST00000368838 BICC1Q9H694 974 aaKnown RBP10.77□□□□□ -0.69
SNX27-201ENST00000368838 MYOZ2Q9NPC6 264 aa10.77□□□□□ -0.69
SNX27-201ENST00000368838 MED23Q9ULK4 1368 aa10.76□□□□□ -0.69
SNX27-201ENST00000368838 MYH13Q9UKX3 1938 aa10.76□□□□□ -0.69
SNX27-201ENST00000368838 SNAP23O00161 211 aa10.76□□□□□ -0.69
SNX27-201ENST00000368838 EPB41L2O43491 1005 aaKnown RBP10.76□□□□□ -0.69
SNX27-201ENST00000368838 CIAO1O76071 339 aa10.76□□□□□ -0.69
SNX27-201ENST00000368838 SASH1O94885 1247 aa10.76□□□□□ -0.69
SNX27-201ENST00000368838 ITGA6P23229 1130 aa10.76□□□□□ -0.69
SNX27-201ENST00000368838 DGKZQ13574 1117 aa10.76□□□□□ -0.69
SNX27-201ENST00000368838 AGBL3Q8NEM8 1001 aa10.76□□□□□ -0.69
SNX27-201ENST00000368838 RHPN1Q8TCX5 695 aa10.76□□□□□ -0.69
SNX27-201ENST00000368838 GMLQ99445 158 aa10.76□□□□□ -0.69
SNX27-201ENST00000368838 LNPKQ9C0E8 428 aa10.76□□□□□ -0.69
SNX27-201ENST00000368838 MCOLN1Q9GZU1 580 aa10.76□□□□□ -0.69
SNX27-201ENST00000368838 BSDC1Q9NW68 430 aaPredicted RBP10.76□□□□□ -0.69
SNX27-201ENST00000368838 TTC41PQ6P2S7 1318 aa10.75□□□□□ -0.69
SNX27-201ENST00000368838 UBE2Q2LH0YL09 131 aa10.75□□□□□ -0.69
SNX27-201ENST00000368838 TAF5LO75529 589 aa10.75□□□□□ -0.69
SNX27-201ENST00000368838 SURF6O75683 361 aaKnown RBP10.75□□□□□ -0.69
SNX27-201ENST00000368838 TRPA1O75762 1119 aa10.75□□□□□ -0.69
SNX27-201ENST00000368838 IGHMBP2P38935 993 aaKnown RBP10.75□□□□□ -0.69
SNX27-201ENST00000368838 RGS3P49796 1198 aa10.75□□□□□ -0.69
SNX27-201ENST00000368838 PTPN12Q05209 780 aaKnown RBP10.75□□□□□ -0.69
SNX27-201ENST00000368838 PRKG1Q13976 671 aa10.75□□□□□ -0.69
SNX27-201ENST00000368838 DACT2Q5SW24 774 aa10.75□□□□□ -0.69
SNX27-201ENST00000368838 PODNQ7Z5L7 613 aa10.75□□□□□ -0.69
SNX27-201ENST00000368838 HELBQ8NG08 1087 aaPredicted RBP10.75□□□□□ -0.69
SNX27-201ENST00000368838 CHMP3Q9Y3E7 222 aa10.75□□□□□ -0.69
SNX27-201ENST00000368838 ZNF804BA4D1E1 1349 aa10.74□□□□□ -0.69
SNX27-201ENST00000368838 KCNJ4P48050 445 aa10.74□□□□□ -0.69
SNX27-201ENST00000368838 PDE1AP54750 535 aa10.74□□□□□ -0.69
SNX27-201ENST00000368838 MKRN3Q13064 507 aaKnown RBP10.74□□□□□ -0.69
SNX27-201ENST00000368838 TTLL12Q14166 644 aaPredicted RBP10.74□□□□□ -0.69
SNX27-201ENST00000368838 EPHA10Q5JZY3 1008 aa10.74□□□□□ -0.69
SNX27-201ENST00000368838 KIAA0825Q8IV33 1275 aa10.74□□□□□ -0.69
SNX27-201ENST00000368838 MPHOSPH8Q99549 860 aa10.74□□□□□ -0.69
SNX27-201ENST00000368838 RNF186Q9NXI6 227 aa10.74□□□□□ -0.69
SNX27-201ENST00000368838 JAG2Q9Y219 1238 aa10.74□□□□□ -0.69
SNX27-201ENST00000368838 RBM19Q9Y4C8 960 aaKnown RBP10.74□□□□□ -0.69
SNX27-201ENST00000368838 ZNF609O15014 1411 aa10.74□□□□□ -0.69
SNX27-201ENST00000368838 OTOFQ9HC10 1997 aa10.73□□□□□ -0.69
SNX27-201ENST00000368838 MAP3K13O43283 966 aa10.73□□□□□ -0.69
SNX27-201ENST00000368838 CA12O43570 354 aa10.73□□□□□ -0.69
SNX27-201ENST00000368838 SLC10A3P09131 477 aa10.73□□□□□ -0.69
SNX27-201ENST00000368838 GTF2IP78347 998 aa10.73□□□□□ -0.69
SNX27-201ENST00000368838 CHRNDQ07001 517 aa10.73□□□□□ -0.69
SNX27-201ENST00000368838 TTC22Q5TAA0 569 aa10.73□□□□□ -0.69
SNX27-201ENST00000368838 RASAL3Q86YV0 1011 aa10.73□□□□□ -0.69
SNX27-201ENST00000368838 CLASRPQ8N2M8 674 aaKnown RBP10.73□□□□□ -0.69
SNX27-201ENST00000368838 IL27Q8NEV9 243 aa10.73□□□□□ -0.69
SNX27-201ENST00000368838 CCDC102AQ96A19 550 aa10.73□□□□□ -0.69
SNX27-201ENST00000368838 ZNF594Q96JF6 807 aaPredicted RBP10.73□□□□□ -0.69
SNX27-201ENST00000368838 CSRNP1Q96S65 589 aa10.73□□□□□ -0.69
SNX27-201ENST00000368838 FZD1Q9UP38 647 aa10.73□□□□□ -0.69
SNX27-201ENST00000368838 EXOC6BQ9Y2D4 811 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms