RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 CCDC178Q5BJE1 867 aa12.31□□□□□ -0.44
EBF3-202ENST00000368648 NBPF11Q86T75 865 aa12.31□□□□□ -0.44
EBF3-202ENST00000368648 CDK5RAP3Q96JB5 506 aa12.31□□□□□ -0.44
EBF3-202ENST00000368648 CCNL1Q9UK58 526 aaPredicted RBP12.31□□□□□ -0.44
EBF3-202ENST00000368648 ARHGEF10O15013 1369 aa12.31□□□□□ -0.44
EBF3-202ENST00000368648 SOS1Q07889 1333 aaPredicted RBP12.31□□□□□ -0.44
EBF3-202ENST00000368648 GOLGA6L10A0A0M3HER8 536 aa12.3□□□□□ -0.44
EBF3-202ENST00000368648 C11orf57Q6ZUT1 292 aaPredicted RBP12.3□□□□□ -0.44
EBF3-202ENST00000368648 DYDC1Q8WWB3 177 aa12.3□□□□□ -0.44
EBF3-202ENST00000368648 PLEKHG1Q9ULL1 1385 aa12.3□□□□□ -0.44
EBF3-202ENST00000368648 A2ML1A8K2U0 1454 aa12.3□□□□□ -0.44
EBF3-202ENST00000368648 IFFO1Q0D2I5 559 aa12.3□□□□□ -0.44
EBF3-202ENST00000368648 IFT81Q8WYA0 676 aa12.3□□□□□ -0.44
EBF3-202ENST00000368648 INSRP06213 1382 aa12.3□□□□□ -0.44
EBF3-202ENST00000368648 SLC27A2O14975 620 aa12.3□□□□□ -0.44
EBF3-202ENST00000368648 USP28Q96RU2 1077 aa12.3□□□□□ -0.44
EBF3-202ENST00000368648 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.3□□□□□ -0.44
EBF3-202ENST00000368648 ZFYVE9O95405 1425 aa12.3□□□□□ -0.44
EBF3-202ENST00000368648 GOLGA6L9A6NEM1 432 aa12.3□□□□□ -0.44
EBF3-202ENST00000368648 MPHOSPH10O00566 681 aaKnown RBP12.3□□□□□ -0.44
EBF3-202ENST00000368648 NF2P35240 595 aa12.3□□□□□ -0.44
EBF3-202ENST00000368648 METAP2P50579 478 aaKnown RBP eCLIP12.3□□□□□ -0.44
EBF3-202ENST00000368648 MAP3K12Q12852 859 aa12.3□□□□□ -0.44
EBF3-202ENST00000368648 ZNF827Q17R98 1081 aa12.3□□□□□ -0.44
EBF3-202ENST00000368648 KMT5BQ4FZB7 885 aa12.3□□□□□ -0.44
EBF3-202ENST00000368648 DNAJC10Q8IXB1 793 aa12.3□□□□□ -0.44
EBF3-202ENST00000368648 EEF2KMTQ96G04 330 aa12.3□□□□□ -0.44
EBF3-202ENST00000368648 KRT18P05783 430 aaKnown RBP12.29□□□□□ -0.44
EBF3-202ENST00000368648 TRIM21P19474 475 aaKnown RBP12.29□□□□□ -0.44
EBF3-202ENST00000368648 CLCN6P51797 869 aa12.29□□□□□ -0.44
EBF3-202ENST00000368648 HDXQ7Z353 690 aa12.29□□□□□ -0.44
EBF3-202ENST00000368648 CACNA2D4Q7Z3S7 1137 aa12.29□□□□□ -0.44
EBF3-202ENST00000368648 KCNG4Q8TDN1 519 aa12.29□□□□□ -0.44
EBF3-202ENST00000368648 PLIN2Q99541 437 aa12.29□□□□□ -0.44
EBF3-202ENST00000368648 PDE11AQ9HCR9 933 aa12.29□□□□□ -0.44
EBF3-202ENST00000368648 SLC12A7Q9Y666 1083 aa12.29□□□□□ -0.44
EBF3-202ENST00000368648 IRX5P78411 483 aaPredicted RBP12.29□□□□□ -0.44
EBF3-202ENST00000368648 ST5P78524 1137 aa12.29□□□□□ -0.44
EBF3-202ENST00000368648 CRACR2BQ8N4Y2 399 aaPredicted RBP12.29□□□□□ -0.44
EBF3-202ENST00000368648 LINS1Q8NG48 757 aa12.29□□□□□ -0.44
EBF3-202ENST00000368648 FAM89AQ96GI7 184 aa12.29□□□□□ -0.44
EBF3-202ENST00000368648 ZNF496Q96IT1 587 aaPredicted RBP12.29□□□□□ -0.44
EBF3-202ENST00000368648 NAPBQ9H115 298 aa12.29□□□□□ -0.44
EBF3-202ENST00000368648 ADGBQ8N7X0 1667 aa12.29□□□□□ -0.44
EBF3-202ENST00000368648 SMIM23A6NLE4 172 aa12.29□□□□□ -0.44
EBF3-202ENST00000368648 HPDP32754 393 aaPredicted RBP12.29□□□□□ -0.44
EBF3-202ENST00000368648 MTIF2P46199 727 aaKnown RBP12.29□□□□□ -0.44
EBF3-202ENST00000368648 ETF1P62495 437 aaKnown RBP12.29□□□□□ -0.44
EBF3-202ENST00000368648 MYL5Q02045 173 aa12.29□□□□□ -0.44
EBF3-202ENST00000368648 ARID5AQ03989 594 aa12.29□□□□□ -0.44
EBF3-202ENST00000368648 PRPF4BQ13523 1007 aaKnown RBP12.29□□□□□ -0.44
EBF3-202ENST00000368648 CCDC96Q2M329 555 aa12.29□□□□□ -0.44
EBF3-202ENST00000368648 CCDC152Q4G0S7 254 aa12.29□□□□□ -0.44
EBF3-202ENST00000368648 IQCEQ6IPM2 695 aa12.29□□□□□ -0.44
EBF3-202ENST00000368648 ZNF710Q8N1W2 664 aa12.29□□□□□ -0.44
EBF3-202ENST00000368648 VPS16Q9H269 839 aa12.29□□□□□ -0.44
EBF3-202ENST00000368648 PRR36Q9H6K5 1346 aa12.29□□□□□ -0.44
EBF3-202ENST00000368648 MACROD2A1Z1Q3 448 aa12.28□□□□□ -0.44
EBF3-202ENST00000368648 AKR1B10O60218 316 aa12.28□□□□□ -0.44
EBF3-202ENST00000368648 ZMYND10O75800 440 aa12.28□□□□□ -0.44
EBF3-202ENST00000368648 RRAGBQ5VZM2 374 aa12.28□□□□□ -0.44
EBF3-202ENST00000368648 GBP6Q6ZN66 633 aa12.28□□□□□ -0.44
EBF3-202ENST00000368648 PRDM4Q9UKN5 801 aa12.28□□□□□ -0.44
EBF3-202ENST00000368648 CLTCQ00610 1675 aaKnown RBP12.28□□□□□ -0.44
EBF3-202ENST00000368648 F8W031 263 aaPredicted RBP12.28□□□□□ -0.44
EBF3-202ENST00000368648 COBLO75128 1261 aa12.28□□□□□ -0.44
EBF3-202ENST00000368648 HMGB1P09429 215 aaKnown RBP12.28□□□□□ -0.44
EBF3-202ENST00000368648 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.28□□□□□ -0.44
EBF3-202ENST00000368648 ANKRD18AQ8IVF6 992 aa12.28□□□□□ -0.44
EBF3-202ENST00000368648 TAF4BQ92750 862 aa12.28□□□□□ -0.44
EBF3-202ENST00000368648 KIAA0232Q92628 1395 aa12.28□□□□□ -0.44
EBF3-202ENST00000368648 MADDQ8WXG6 1647 aa12.28□□□□□ -0.44
EBF3-202ENST00000368648 ARHGAP31Q2M1Z3 1444 aa12.28□□□□□ -0.44
EBF3-202ENST00000368648 TMCO5BA8MYB1 307 aa12.28□□□□□ -0.44
EBF3-202ENST00000368648 IDEP14735 1019 aa12.28□□□□□ -0.44
EBF3-202ENST00000368648 SEC62Q99442 399 aaKnown RBP12.28□□□□□ -0.44
EBF3-202ENST00000368648 KDM5CP41229 1560 aa12.28□□□□□ -0.44
EBF3-202ENST00000368648 NDUFAB1O14561 156 aa12.28□□□□□ -0.44
EBF3-202ENST00000368648 TIMM10P62072 90 aa12.28□□□□□ -0.44
EBF3-202ENST00000368648 NAA25Q14CX7 972 aa12.28□□□□□ -0.44
EBF3-202ENST00000368648 TMEM67Q5HYA8 995 aa12.28□□□□□ -0.44
EBF3-202ENST00000368648 WWC2Q6AWC2 1192 aa12.28□□□□□ -0.44
EBF3-202ENST00000368648 DDX41Q9UJV9 622 aaKnown RBP12.28□□□□□ -0.44
EBF3-202ENST00000368648 RANBP6O60518 1105 aaKnown RBP12.27□□□□□ -0.44
EBF3-202ENST00000368648 ZNF202O95125 648 aa12.27□□□□□ -0.44
EBF3-202ENST00000368648 CCDC144BQ3MJ40 725 aa12.27□□□□□ -0.44
EBF3-202ENST00000368648 TPTE2Q6XPS3 522 aa12.27□□□□□ -0.44
EBF3-202ENST00000368648 MKNK2Q9HBH9 465 aa12.27□□□□□ -0.44
EBF3-202ENST00000368648 FRMD3A2A2Y4 597 aa12.27□□□□□ -0.45
EBF3-202ENST00000368648 ANKRD62A6NC57 917 aa12.27□□□□□ -0.45
EBF3-202ENST00000368648 MAP2K1Q02750 393 aaPredicted RBP12.27□□□□□ -0.45
EBF3-202ENST00000368648 JAG2Q9Y219 1238 aa12.27□□□□□ -0.45
EBF3-202ENST00000368648 RPS6KB1P23443 525 aa12.27□□□□□ -0.45
EBF3-202ENST00000368648 NOP2P46087 812 aaKnown RBP12.27□□□□□ -0.45
EBF3-202ENST00000368648 DDX21Q9NR30 783 aaKnown RBP eCLIP12.27□□□□□ -0.45
EBF3-202ENST00000368648 HMG20BQ9P0W2 317 aa12.27□□□□□ -0.45
EBF3-202ENST00000368648 NFE2L3Q9Y4A8 694 aa12.27□□□□□ -0.45
EBF3-202ENST00000368648 POTEB2H3BUK9 544 aa12.26□□□□□ -0.45
EBF3-202ENST00000368648 IRS4O14654 1257 aaPredicted RBP12.26□□□□□ -0.45
EBF3-202ENST00000368648 CEP112Q8N8E3 955 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms