RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 HAUS7Q99871 368 aa16.92■□□□□ 0.3
TPM3-211ENST00000368531 RAI14Q9P0K7 980 aa16.92■□□□□ 0.3
TPM3-211ENST00000368531 STAP2Q9UGK3 403 aa16.92■□□□□ 0.3
TPM3-211ENST00000368531 HDAC9Q9UKV0 1011 aa16.92■□□□□ 0.3
TPM3-211ENST00000368531 UTRNP46939 3433 aa16.92■□□□□ 0.3
TPM3-211ENST00000368531 SALL1Q9NSC2 1324 aa16.92■□□□□ 0.3
TPM3-211ENST00000368531 MYH2Q9UKX2 1941 aa16.92■□□□□ 0.3
TPM3-211ENST00000368531 GLRX3O76003 335 aaKnown RBP16.91■□□□□ 0.3
TPM3-211ENST00000368531 VEGFAP15692 232 aaPredicted RBP16.91■□□□□ 0.3
TPM3-211ENST00000368531 EPHX2P34913 555 aa16.91■□□□□ 0.3
TPM3-211ENST00000368531 RBM5P52756 815 aaKnown RBP eCLIP16.91■□□□□ 0.3
TPM3-211ENST00000368531 TBC1D10BQ4KMP7 808 aaPredicted RBP16.91■□□□□ 0.3
TPM3-211ENST00000368531 SPTY2D1Q68D10 685 aaPredicted RBP16.91■□□□□ 0.3
TPM3-211ENST00000368531 DZIP1Q86YF9 867 aaKnown RBP16.91■□□□□ 0.3
TPM3-211ENST00000368531 PAG1Q9NWQ8 432 aa16.91■□□□□ 0.3
TPM3-211ENST00000368531 GTF3C3Q9Y5Q9 886 aa16.91■□□□□ 0.3
TPM3-211ENST00000368531 IQCA1LA6NCM1 817 aa16.9■□□□□ 0.3
TPM3-211ENST00000368531 ZBTB22O15209 634 aa16.9■□□□□ 0.3
TPM3-211ENST00000368531 IDH1O75874 414 aaKnown RBP16.9■□□□□ 0.3
TPM3-211ENST00000368531 EGFRP00533 1210 aa16.9■□□□□ 0.3
TPM3-211ENST00000368531 EAPPQ56P03 285 aaPredicted RBP16.9■□□□□ 0.3
TPM3-211ENST00000368531 ZNF784Q8NCA9 323 aaPredicted RBP16.9■□□□□ 0.3
TPM3-211ENST00000368531 TAF1DQ9H5J8 278 aaPredicted RBP16.9■□□□□ 0.3
TPM3-211ENST00000368531 PCDHAC2Q9Y5I4 1007 aa16.9■□□□□ 0.3
TPM3-211ENST00000368531 RGS3P49796 1198 aa16.89■□□□□ 0.29
TPM3-211ENST00000368531 DIXDC1Q155Q3 683 aa16.89■□□□□ 0.29
TPM3-211ENST00000368531 TRPM4Q8TD43 1214 aa16.89■□□□□ 0.29
TPM3-211ENST00000368531 MYOZ2Q9NPC6 264 aa16.89■□□□□ 0.29
TPM3-211ENST00000368531 ADARB2Q9NS39 739 aaKnown RBP16.89■□□□□ 0.29
TPM3-211ENST00000368531 SUGT1Q9Y2Z0 365 aa16.89■□□□□ 0.29
TPM3-211ENST00000368531 DOCK2Q92608 1830 aa16.89■□□□□ 0.29
TPM3-211ENST00000368531 CRKP46108 304 aa16.88■□□□□ 0.29
TPM3-211ENST00000368531 ZNF280AP59817 542 aaPredicted RBP16.88■□□□□ 0.29
TPM3-211ENST00000368531 MECOMQ03112 1051 aa16.88■□□□□ 0.29
TPM3-211ENST00000368531 TTF1Q15361 905 aaPredicted RBP16.88■□□□□ 0.29
TPM3-211ENST00000368531 KIF4BQ2VIQ3 1234 aa16.88■□□□□ 0.29
TPM3-211ENST00000368531 CFAP100Q494V2 611 aa16.88■□□□□ 0.29
TPM3-211ENST00000368531 MYH7P12883 1935 aa16.88■□□□□ 0.29
TPM3-211ENST00000368531 AK9Q5TCS8 1911 aa16.88■□□□□ 0.29
TPM3-211ENST00000368531 TRIM6-TRIM34B2RNG4 842 aa16.87■□□□□ 0.29
TPM3-211ENST00000368531 MAP3K12Q12852 859 aa16.87■□□□□ 0.29
TPM3-211ENST00000368531 DLGAP5Q15398 846 aa16.87■□□□□ 0.29
TPM3-211ENST00000368531 CNKSR2Q8WXI2 1034 aa16.87■□□□□ 0.29
TPM3-211ENST00000368531 TEKT1Q969V4 418 aa16.87■□□□□ 0.29
TPM3-211ENST00000368531 CLEC11AQ9Y240 323 aa16.87■□□□□ 0.29
TPM3-211ENST00000368531 MAST3O60307 1309 aa16.87■□□□□ 0.29
TPM3-211ENST00000368531 HIRAP54198 1017 aaPredicted RBP16.86■□□□□ 0.29
TPM3-211ENST00000368531 NAA16Q6N069 864 aaPredicted RBP16.86■□□□□ 0.29
TPM3-211ENST00000368531 MAGEB6Q8N7X4 407 aa16.86■□□□□ 0.29
TPM3-211ENST00000368531 RILPL2Q969X0 211 aa16.86■□□□□ 0.29
TPM3-211ENST00000368531 NSUN4Q96CB9 384 aaKnown RBP16.86■□□□□ 0.29
TPM3-211ENST00000368531 OSBPL3Q9H4L5 887 aa16.86■□□□□ 0.29
TPM3-211ENST00000368531 AOX1Q06278 1338 aa16.86■□□□□ 0.29
TPM3-211ENST00000368531 MAST2Q6P0Q8 1798 aa16.86■□□□□ 0.29
TPM3-211ENST00000368531 POLR2AP24928 1970 aaKnown RBP16.86■□□□□ 0.29
TPM3-211ENST00000368531 POTEIP0CG38 1075 aa16.85■□□□□ 0.29
TPM3-211ENST00000368531 POTEJP0CG39 1038 aa16.85■□□□□ 0.29
TPM3-211ENST00000368531 CYP7A1P22680 504 aa16.85■□□□□ 0.29
TPM3-211ENST00000368531 NBPF9Q3BBW0 867 aa16.85■□□□□ 0.29
TPM3-211ENST00000368531 SLFNL1Q499Z3 407 aa16.85■□□□□ 0.29
TPM3-211ENST00000368531 USP50Q70EL3 339 aaPredicted RBP16.85■□□□□ 0.29
TPM3-211ENST00000368531 ZNF384Q8TF68 577 aa16.85■□□□□ 0.29
TPM3-211ENST00000368531 PRMT6Q96LA8 375 aaPredicted RBP16.85■□□□□ 0.29
TPM3-211ENST00000368531 SERPINA10Q9UK55 444 aa16.85■□□□□ 0.29
TPM3-211ENST00000368531 ASTN2O75129 1339 aaPredicted RBP16.85■□□□□ 0.29
TPM3-211ENST00000368531 WNT10BO00744 389 aa16.84■□□□□ 0.29
TPM3-211ENST00000368531 KIF3CO14782 793 aa16.84■□□□□ 0.29
TPM3-211ENST00000368531 CHGBP05060 677 aa16.84■□□□□ 0.29
TPM3-211ENST00000368531 GSTO1P78417 241 aa16.84■□□□□ 0.29
TPM3-211ENST00000368531 HDLBPQ00341 1268 aaKnown RBP16.84■□□□□ 0.29
TPM3-211ENST00000368531 TTC22Q5TAA0 569 aa16.84■□□□□ 0.29
TPM3-211ENST00000368531 SLC9C2Q5TAH2 1124 aa16.84■□□□□ 0.29
TPM3-211ENST00000368531 PNMA8AQ86V59 439 aaPredicted RBP16.84■□□□□ 0.29
TPM3-211ENST00000368531 SLF2Q8IX21 1173 aa16.84■□□□□ 0.29
TPM3-211ENST00000368531 KBTBD3Q8NAB2 608 aa16.84■□□□□ 0.29
TPM3-211ENST00000368531 FSD1Q9BTV5 496 aa16.84■□□□□ 0.29
TPM3-211ENST00000368531 DAGLAQ9Y4D2 1042 aa16.84■□□□□ 0.29
TPM3-211ENST00000368531 ECM29Q5VYK3 1845 aa16.84■□□□□ 0.29
TPM3-211ENST00000368531 CLRN2A0PK11 232 aa16.83■□□□□ 0.28
TPM3-211ENST00000368531 LDHCP07864 332 aa16.83■□□□□ 0.28
TPM3-211ENST00000368531 HHIPL2Q6UWX4 724 aa16.83■□□□□ 0.28
TPM3-211ENST00000368531 EVI5LQ96CN4 794 aa16.83■□□□□ 0.28
TPM3-211ENST00000368531 ZDHHC15Q96MV8 337 aa16.83■□□□□ 0.28
TPM3-211ENST00000368531 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.83■□□□□ 0.28
TPM3-211ENST00000368531 TDRD3Q9H7E2 651 aaKnown RBP16.83■□□□□ 0.28
TPM3-211ENST00000368531 SCAF8Q9UPN6 1271 aaKnown RBP16.83■□□□□ 0.28
TPM3-211ENST00000368531 MROH7-TTC4A0A0A0MT08 1334 aa16.82■□□□□ 0.28
TPM3-211ENST00000368531 ZNF532Q9HCE3 1301 aa16.82■□□□□ 0.28
TPM3-211ENST00000368531 SPDYE2BA6NHP3 402 aa16.82■□□□□ 0.28
TPM3-211ENST00000368531 SPDYE6P0CI01 402 aa16.82■□□□□ 0.28
TPM3-211ENST00000368531 PDE6AP16499 860 aa16.82■□□□□ 0.28
TPM3-211ENST00000368531 HOXD11P31277 338 aaPredicted RBP16.82■□□□□ 0.28
TPM3-211ENST00000368531 MMP14P50281 582 aa16.82■□□□□ 0.28
TPM3-211ENST00000368531 ADGRA1Q86SQ6 560 aa16.82■□□□□ 0.28
TPM3-211ENST00000368531 CNTROBQ8N137 903 aa16.82■□□□□ 0.28
TPM3-211ENST00000368531 NOL10Q9BSC4 688 aaKnown RBP16.82■□□□□ 0.28
TPM3-211ENST00000368531 MRIQ9BWK5 157 aa16.82■□□□□ 0.28
TPM3-211ENST00000368531 MYO1BO43795 1136 aa16.81■□□□□ 0.28
TPM3-211ENST00000368531 GSPT1P15170 499 aaKnown RBP16.81■□□□□ 0.28
TPM3-211ENST00000368531 ADD2P35612 726 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms