RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 CA12O43570 354 aa8.51□□□□□ -1.05
ECHDC1-202ENST00000368289 GNRH1P01148 92 aa8.51□□□□□ -1.05
ECHDC1-202ENST00000368289 ADH1AP07327 375 aa8.51□□□□□ -1.05
ECHDC1-202ENST00000368289 FBLN1P23142 703 aa8.51□□□□□ -1.05
ECHDC1-202ENST00000368289 SCTRP47872 440 aa8.51□□□□□ -1.05
ECHDC1-202ENST00000368289 EAPPQ56P03 285 aaPredicted RBP8.51□□□□□ -1.05
ECHDC1-202ENST00000368289 NBPF6Q5VWK0 638 aa8.51□□□□□ -1.05
ECHDC1-202ENST00000368289 LARGE2Q8N3Y3 721 aa8.51□□□□□ -1.05
ECHDC1-202ENST00000368289 SMARCC1Q92922 1105 aaPredicted RBP8.51□□□□□ -1.05
ECHDC1-202ENST00000368289 NBPF4Q96M43 638 aa8.51□□□□□ -1.05
ECHDC1-202ENST00000368289 TSEN34Q9BSV6 310 aaKnown RBP8.51□□□□□ -1.05
ECHDC1-202ENST00000368289 CARD11Q9BXL7 1154 aa8.51□□□□□ -1.05
ECHDC1-202ENST00000368289 OSBPL3Q9H4L5 887 aa8.51□□□□□ -1.05
ECHDC1-202ENST00000368289 DNAAF2Q9NVR5 837 aaKnown RBP8.51□□□□□ -1.05
ECHDC1-202ENST00000368289 RNF123Q5XPI4 1314 aa8.51□□□□□ -1.05
ECHDC1-202ENST00000368289 TTC21AQ8NDW8 1320 aa8.51□□□□□ -1.05
ECHDC1-202ENST00000368289 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.5□□□□□ -1.05
ECHDC1-202ENST00000368289 ADD1P35611 737 aaKnown RBP8.5□□□□□ -1.05
ECHDC1-202ENST00000368289 ECE1P42892 770 aa8.5□□□□□ -1.05
ECHDC1-202ENST00000368289 CRIPAKQ8N1N5 446 aa8.5□□□□□ -1.05
ECHDC1-202ENST00000368289 OGFOD1Q8N543 542 aa8.5□□□□□ -1.05
ECHDC1-202ENST00000368289 USHBP1Q8N6Y0 703 aa8.5□□□□□ -1.05
ECHDC1-202ENST00000368289 ANP32EQ9BTT0 268 aa8.5□□□□□ -1.05
ECHDC1-202ENST00000368289 DICER1Q9UPY3 1922 aaKnown RBP8.5□□□□□ -1.05
ECHDC1-202ENST00000368289 LTN1O94822 1766 aa8.5□□□□□ -1.05
ECHDC1-202ENST00000368289 RGPD2P0DJD1 1756 aa8.5□□□□□ -1.05
ECHDC1-202ENST00000368289 ZNF541Q9H0D2 1346 aa8.5□□□□□ -1.05
ECHDC1-202ENST00000368289 ITGB4P16144 1822 aa8.5□□□□□ -1.05
ECHDC1-202ENST00000368289 KDRP35968 1356 aa8.49□□□□□ -1.05
ECHDC1-202ENST00000368289 ATG7O95352 703 aa8.49□□□□□ -1.05
ECHDC1-202ENST00000368289 CBLBQ13191 982 aa8.49□□□□□ -1.05
ECHDC1-202ENST00000368289 MEIOBQ8N635 442 aa8.49□□□□□ -1.05
ECHDC1-202ENST00000368289 TTLL6Q8N841 843 aa8.49□□□□□ -1.05
ECHDC1-202ENST00000368289 ATG3Q9NT62 314 aa8.49□□□□□ -1.05
ECHDC1-202ENST00000368289 RTCBQ9Y3I0 505 aaKnown RBP8.49□□□□□ -1.05
ECHDC1-202ENST00000368289 PCDHGA11Q9Y5H2 935 aa8.49□□□□□ -1.05
ECHDC1-202ENST00000368289 MYH14Q7Z406 1995 aaKnown RBP8.49□□□□□ -1.05
ECHDC1-202ENST00000368289 MYBBP1AQ9BQG0 1328 aaKnown RBP8.49□□□□□ -1.05
ECHDC1-202ENST00000368289 CARMIL3Q8ND23 1372 aa8.48□□□□□ -1.05
ECHDC1-202ENST00000368289 CACNA1AO00555 2505 aa8.48□□□□□ -1.05
ECHDC1-202ENST00000368289 KIAA0100Q14667 2235 aaKnown RBP8.48□□□□□ -1.05
ECHDC1-202ENST00000368289 IQCA1LA6NCM1 817 aa8.48□□□□□ -1.05
ECHDC1-202ENST00000368289 RPS6KA4O75676 772 aa8.48□□□□□ -1.05
ECHDC1-202ENST00000368289 EPHX2P34913 555 aa8.48□□□□□ -1.05
ECHDC1-202ENST00000368289 PTGIRP43119 386 aa8.48□□□□□ -1.05
ECHDC1-202ENST00000368289 PDE4CQ08493 712 aa8.48□□□□□ -1.05
ECHDC1-202ENST00000368289 SCARF1Q14162 830 aa8.48□□□□□ -1.05
ECHDC1-202ENST00000368289 CDCA8Q53HL2 280 aa8.48□□□□□ -1.05
ECHDC1-202ENST00000368289 SAPCD2Q86UD0 394 aa8.48□□□□□ -1.05
ECHDC1-202ENST00000368289 HOMEZQ8IX15 550 aa8.48□□□□□ -1.05
ECHDC1-202ENST00000368289 DCAF11Q8TEB1 546 aa8.48□□□□□ -1.05
ECHDC1-202ENST00000368289 NUDCQ9Y266 331 aa8.48□□□□□ -1.05
ECHDC1-202ENST00000368289 SCN4AP35499 1836 aa8.47□□□□□ -1.05
ECHDC1-202ENST00000368289 FER1L6Q2WGJ9 1857 aa8.47□□□□□ -1.05
ECHDC1-202ENST00000368289 CD163L1Q9NR16 1453 aa8.47□□□□□ -1.05
ECHDC1-202ENST00000368289 BACH1O14867 736 aa8.47□□□□□ -1.05
ECHDC1-202ENST00000368289 C21orf2O43822 256 aa8.47□□□□□ -1.05
ECHDC1-202ENST00000368289 HMGB2P26583 209 aaKnown RBP8.47□□□□□ -1.05
ECHDC1-202ENST00000368289 ELOAQ14241 798 aaKnown RBP8.47□□□□□ -1.05
ECHDC1-202ENST00000368289 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.47□□□□□ -1.055e-7■■■□□ 18.9
ECHDC1-202ENST00000368289 FAM9BQ8IZU0 186 aa8.47□□□□□ -1.05
ECHDC1-202ENST00000368289 TMC1Q8TDI8 760 aa8.47□□□□□ -1.05
ECHDC1-202ENST00000368289 PNISRQ8TF01 805 aaKnown RBP8.47□□□□□ -1.05
ECHDC1-202ENST00000368289 SBNO2Q9Y2G9 1366 aa8.47□□□□□ -1.05
ECHDC1-202ENST00000368289 USP17L15C9J2P7 530 aa8.46□□□□□ -1.06
ECHDC1-202ENST00000368289 USP17L10C9JJH3 530 aa8.46□□□□□ -1.06
ECHDC1-202ENST00000368289 USP17L13C9JLJ4 530 aa8.46□□□□□ -1.06
ECHDC1-202ENST00000368289 USP17L12C9JPN9 530 aa8.46□□□□□ -1.06
ECHDC1-202ENST00000368289 USP17L11C9JVI0 530 aa8.46□□□□□ -1.06
ECHDC1-202ENST00000368289 USP17L21D6R901 530 aa8.46□□□□□ -1.06
ECHDC1-202ENST00000368289 USP17L18D6R9N7 530 aa8.46□□□□□ -1.06
ECHDC1-202ENST00000368289 USP17L22D6RA61 530 aa8.46□□□□□ -1.06
ECHDC1-202ENST00000368289 USP17L17D6RBQ6 530 aa8.46□□□□□ -1.06
ECHDC1-202ENST00000368289 USP17L19D6RCP7 530 aa8.46□□□□□ -1.06
ECHDC1-202ENST00000368289 USP17L20D6RJB6 530 aa8.46□□□□□ -1.06
ECHDC1-202ENST00000368289 ZBTB7BO15156 539 aaPredicted RBP8.46□□□□□ -1.06
ECHDC1-202ENST00000368289 RFC4P35249 363 aa8.46□□□□□ -1.06
ECHDC1-202ENST00000368289 CLDN10P78369 228 aa8.46□□□□□ -1.06
ECHDC1-202ENST00000368289 USP17L24Q0WX57 530 aa8.46□□□□□ -1.06
ECHDC1-202ENST00000368289 PTK7Q13308 1070 aa8.46□□□□□ -1.06
ECHDC1-202ENST00000368289 CCDC102BQ68D86 513 aa8.46□□□□□ -1.06
ECHDC1-202ENST00000368289 SIX5Q8N196 739 aa8.46□□□□□ -1.06
ECHDC1-202ENST00000368289 LINC00528Q8N1L1 170 aa8.46□□□□□ -1.06
ECHDC1-202ENST00000368289 COL25A1Q9BXS0 654 aaPredicted RBP8.46□□□□□ -1.06
ECHDC1-202ENST00000368289 USP42Q9H9J4 1324 aaKnown RBP8.46□□□□□ -1.06
ECHDC1-202ENST00000368289 LTBP3Q9NS15 1303 aa8.46□□□□□ -1.06
ECHDC1-202ENST00000368289 DLEC1Q9Y238 1755 aa8.45□□□□□ -1.06
ECHDC1-202ENST00000368289 HOXC9P31274 260 aa8.45□□□□□ -1.06
ECHDC1-202ENST00000368289 RELBQ01201 579 aa8.45□□□□□ -1.06
ECHDC1-202ENST00000368289 MRPL14Q6P1L8 145 aaKnown RBP8.45□□□□□ -1.06
ECHDC1-202ENST00000368289 Q6ZNB5 142 aa8.45□□□□□ -1.06
ECHDC1-202ENST00000368289 ANKMY2Q8IV38 441 aa8.45□□□□□ -1.06
ECHDC1-202ENST00000368289 TPCN2Q8NHX9 752 aa8.45□□□□□ -1.06
ECHDC1-202ENST00000368289 FAM200AQ8TCP9 573 aa8.45□□□□□ -1.06
ECHDC1-202ENST00000368289 NLRP3Q96P20 1036 aa8.45□□□□□ -1.06
ECHDC1-202ENST00000368289 HACL1Q9UJ83 578 aa8.45□□□□□ -1.06
ECHDC1-202ENST00000368289 CNTNAP4Q9C0A0 1308 aa8.45□□□□□ -1.06
ECHDC1-202ENST00000368289 GDF10P55107 478 aa8.44□□□□□ -1.06
ECHDC1-202ENST00000368289 SEC13P55735 322 aa8.44□□□□□ -1.06
ECHDC1-202ENST00000368289 CRTC2Q53ET0 693 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms