RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 JAG2Q9Y219 1238 aa12.21□□□□□ -0.45
CD48-202ENST00000368046 SCN9AQ15858 1988 aa12.21□□□□□ -0.46
CD48-202ENST00000368046 CEP350Q5VT06 3117 aa12.21□□□□□ -0.46
CD48-202ENST00000368046 PITPNM2Q9BZ72 1349 aa12.2□□□□□ -0.46
CD48-202ENST00000368046 TFCP2Q12800 502 aa12.2□□□□□ -0.46
CD48-202ENST00000368046 MVPQ14764 893 aaKnown RBP12.2□□□□□ -0.46
CD48-202ENST00000368046 DLGAP5Q15398 846 aa12.2□□□□□ -0.46
CD48-202ENST00000368046 MFSD14BQ5SR56 506 aa12.2□□□□□ -0.46
CD48-202ENST00000368046 JMYQ8N9B5 988 aa12.2□□□□□ -0.46
CD48-202ENST00000368046 TBC1D22AQ8WUA7 517 aa12.2□□□□□ -0.46
CD48-202ENST00000368046 ZBED3Q96IU2 234 aaPredicted RBP12.2□□□□□ -0.46
CD48-202ENST00000368046 YTHDC1Q96MU7 727 aaKnown RBP12.2□□□□□ -0.46
CD48-202ENST00000368046 C1orf115Q9H7X2 142 aa12.2□□□□□ -0.46
CD48-202ENST00000368046 GNL3LQ9NVN8 582 aaKnown RBP12.2□□□□□ -0.46
CD48-202ENST00000368046 GGA3Q9NZ52 723 aa12.2□□□□□ -0.46
CD48-202ENST00000368046 IQSEC3Q9UPP2 1182 aaPredicted RBP12.2□□□□□ -0.46
CD48-202ENST00000368046 COG6Q9Y2V7 657 aa12.2□□□□□ -0.46
CD48-202ENST00000368046 ASTN2O75129 1339 aaPredicted RBP12.19□□□□□ -0.46
CD48-202ENST00000368046 RASSF10A6NK89 507 aa12.19□□□□□ -0.46
CD48-202ENST00000368046 F8W031 263 aaPredicted RBP12.19□□□□□ -0.46
CD48-202ENST00000368046 SURF6O75683 361 aaKnown RBP12.19□□□□□ -0.46
CD48-202ENST00000368046 CELF2O95319 508 aaKnown RBP12.19□□□□□ -0.46
CD48-202ENST00000368046 DLK2Q6UY11 383 aa12.19□□□□□ -0.46
CD48-202ENST00000368046 SPNS2Q8IVW8 549 aa12.19□□□□□ -0.46
CD48-202ENST00000368046 RPAP2Q8IXW5 612 aaPredicted RBP12.19□□□□□ -0.46
CD48-202ENST00000368046 MRIQ9BWK5 157 aa12.19□□□□□ -0.46
CD48-202ENST00000368046 MKRN1Q9UHC7 482 aaKnown RBP12.19□□□□□ -0.46
CD48-202ENST00000368046 A0A1B0GUL7 405 aa12.18□□□□□ -0.46
CD48-202ENST00000368046 RBM5P52756 815 aaKnown RBP eCLIP12.18□□□□□ -0.46
CD48-202ENST00000368046 HDLBPQ00341 1268 aaKnown RBP12.18□□□□□ -0.46
CD48-202ENST00000368046 CHAF1AQ13111 956 aaPredicted RBP12.18□□□□□ -0.46
CD48-202ENST00000368046 CFAP100Q494V2 611 aa12.18□□□□□ -0.46
CD48-202ENST00000368046 CEP85Q6P2H3 762 aa12.18□□□□□ -0.46
CD48-202ENST00000368046 WDR66Q8TBY9 1149 aa12.18□□□□□ -0.46
CD48-202ENST00000368046 PRMT6Q96LA8 375 aaPredicted RBP12.18□□□□□ -0.46
CD48-202ENST00000368046 NEUROD6Q96NK8 337 aa12.18□□□□□ -0.46
CD48-202ENST00000368046 ZNF408Q9H9D4 720 aa12.18□□□□□ -0.46
CD48-202ENST00000368046 ZBTB40Q9NUA8 1239 aa12.18□□□□□ -0.46
CD48-202ENST00000368046 SERPINA10Q9UK55 444 aa12.18□□□□□ -0.46
CD48-202ENST00000368046 ABT1Q9ULW3 272 aaKnown RBP12.18□□□□□ -0.46
CD48-202ENST00000368046 TTF2Q9UNY4 1162 aaKnown RBP12.18□□□□□ -0.46
CD48-202ENST00000368046 NOP58Q9Y2X3 529 aaKnown RBP12.18□□□□□ -0.46
CD48-202ENST00000368046 SUGT1Q9Y2Z0 365 aa12.18□□□□□ -0.46
CD48-202ENST00000368046 TLL2Q9Y6L7 1015 aa12.18□□□□□ -0.46
CD48-202ENST00000368046 ADM5C9JUS6 153 aa12.17□□□□□ -0.46
CD48-202ENST00000368046 SEMA3EO15041 775 aa12.17□□□□□ -0.46
CD48-202ENST00000368046 MYO1BO43795 1136 aa12.17□□□□□ -0.46
CD48-202ENST00000368046 IER5LQ5T953 404 aa12.17□□□□□ -0.46
CD48-202ENST00000368046 CCDC102BQ68D86 513 aa12.17□□□□□ -0.46
CD48-202ENST00000368046 SAPCD2Q86UD0 394 aa12.17□□□□□ -0.46
CD48-202ENST00000368046 C2orf69Q8N8R5 385 aa12.17□□□□□ -0.46
CD48-202ENST00000368046 XAGE2Q96GT9 111 aa12.17□□□□□ -0.46
CD48-202ENST00000368046 GPR108Q9NPR9 543 aa12.17□□□□□ -0.46
CD48-202ENST00000368046 DENND2AQ9ULE3 1009 aa12.17□□□□□ -0.46
CD48-202ENST00000368046 ADORA1P30542 326 aa12.16□□□□□ -0.46
CD48-202ENST00000368046 PHKA1P46020 1223 aa12.16□□□□□ -0.46
CD48-202ENST00000368046 VEGFBP49765 207 aa12.16□□□□□ -0.46
CD48-202ENST00000368046 OS9Q13438 667 aaPredicted RBP12.16□□□□□ -0.46
CD48-202ENST00000368046 GRIK5Q16478 980 aa12.16□□□□□ -0.46
CD48-202ENST00000368046 C20orf194Q5TEA3 1177 aa12.16□□□□□ -0.46
CD48-202ENST00000368046 HHIPL1Q96JK4 782 aa12.16□□□□□ -0.46
CD48-202ENST00000368046 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.16□□□□□ -0.46
CD48-202ENST00000368046 CNTNAP1P78357 1384 aa12.16□□□□□ -0.46
CD48-202ENST00000368046 CRKP46108 304 aa12.15□□□□□ -0.46
CD48-202ENST00000368046 GORABQ5T7V8 394 aa12.15□□□□□ -0.46
CD48-202ENST00000368046 APOBEC3FQ8IUX4 373 aaKnown RBP12.15□□□□□ -0.46
CD48-202ENST00000368046 CDCA5Q96FF9 252 aa12.15□□□□□ -0.46
CD48-202ENST00000368046 GBA2Q9HCG7 927 aaPredicted RBP12.15□□□□□ -0.46
CD48-202ENST00000368046 PCDHAC2Q9Y5I4 1007 aa12.15□□□□□ -0.46
CD48-202ENST00000368046 PSME4Q14997 1843 aa12.15□□□□□ -0.46
CD48-202ENST00000368046 ECE1P42892 770 aa12.14□□□□□ -0.47
CD48-202ENST00000368046 FKBP1BP68106 108 aa12.14□□□□□ -0.47
CD48-202ENST00000368046 HSP90AB4PQ58FF6 505 aa12.14□□□□□ -0.47
CD48-202ENST00000368046 HHIPL2Q6UWX4 724 aa12.14□□□□□ -0.47
CD48-202ENST00000368046 TEKT1Q969V4 418 aa12.14□□□□□ -0.47
CD48-202ENST00000368046 DEFB129Q9H1M3 183 aa12.14□□□□□ -0.47
CD48-202ENST00000368046 SCAF8Q9UPN6 1271 aaKnown RBP12.14□□□□□ -0.47
CD48-202ENST00000368046 A0A1B0GUL6 1792 aa12.14□□□□□ -0.47
CD48-202ENST00000368046 MAST3O60307 1309 aa12.13□□□□□ -0.47
CD48-202ENST00000368046 WDR33Q9C0J8 1336 aaKnown RBP12.13□□□□□ -0.47
CD48-202ENST00000368046 SALL1Q9NSC2 1324 aa12.13□□□□□ -0.47
CD48-202ENST00000368046 HMMRO75330 724 aa12.13□□□□□ -0.47
CD48-202ENST00000368046 HUNKP57058 714 aa12.13□□□□□ -0.47
CD48-202ENST00000368046 TNNI3KQ59H18 835 aa12.13□□□□□ -0.47
CD48-202ENST00000368046 PRAMEF18Q5VWM3 479 aa12.13□□□□□ -0.47
CD48-202ENST00000368046 ERC1Q8IUD2 1116 aa12.13□□□□□ -0.47
CD48-202ENST00000368046 SIRT2Q8IXJ6 389 aa12.13□□□□□ -0.47
CD48-202ENST00000368046 RASEFQ8IZ41 740 aa12.13□□□□□ -0.47
CD48-202ENST00000368046 ZGPATQ8N5A5 531 aaKnown RBP12.13□□□□□ -0.47
CD48-202ENST00000368046 TDRD3Q9H7E2 651 aaKnown RBP12.13□□□□□ -0.47
CD48-202ENST00000368046 ZNF70Q9UC06 446 aaPredicted RBP12.13□□□□□ -0.47
CD48-202ENST00000368046 FPGT-TNNI3KV9GXZ4 949 aa12.13□□□□□ -0.47
CD48-202ENST00000368046 PDS5AQ29RF7 1337 aaKnown RBP12.12□□□□□ -0.47
CD48-202ENST00000368046 CLRN2A0PK11 232 aa12.12□□□□□ -0.47
CD48-202ENST00000368046 LDHBP07195 334 aaKnown RBP12.12□□□□□ -0.47
CD48-202ENST00000368046 UQCRFS1P1P0C7P4 283 aa12.12□□□□□ -0.47
CD48-202ENST00000368046 NF2P35240 595 aa12.12□□□□□ -0.47
CD48-202ENST00000368046 RASGRF1Q13972 1273 aa12.12□□□□□ -0.47
CD48-202ENST00000368046 CCDC158Q5M9N0 1113 aa12.12□□□□□ -0.47
CD48-202ENST00000368046 CYP4F22Q6NT55 531 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms