RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 DNAI1Q9UI46 699 aa8.34□□□□□ -1.07
VTA1-202ENST00000367630 HCLS1P14317 486 aaPredicted RBP8.34□□□□□ -1.07
VTA1-202ENST00000367630 CMA1P23946 247 aa8.34□□□□□ -1.07
VTA1-202ENST00000367630 GTF2F1P35269 517 aaKnown RBP eCLIP8.34□□□□□ -1.07
VTA1-202ENST00000367630 CEP128Q6ZU80 1094 aa8.34□□□□□ -1.07
VTA1-202ENST00000367630 GOLGA1Q92805 767 aa8.34□□□□□ -1.07
VTA1-202ENST00000367630 SEC63Q9UGP8 760 aaKnown RBP8.34□□□□□ -1.07
VTA1-202ENST00000367630 DAAM1Q9Y4D1 1078 aa8.34□□□□□ -1.07
VTA1-202ENST00000367630 TNS3Q68CZ2 1445 aa8.34□□□□□ -1.07
VTA1-202ENST00000367630 IFIT3O14879 490 aaKnown RBP8.34□□□□□ -1.07
VTA1-202ENST00000367630 PDE8AO60658 829 aa8.34□□□□□ -1.07
VTA1-202ENST00000367630 PHKG2P15735 406 aa8.34□□□□□ -1.07
VTA1-202ENST00000367630 ANGEL1Q9UNK9 670 aaKnown RBP8.34□□□□□ -1.07
VTA1-202ENST00000367630 G3V3G9 751 aa8.34□□□□□ -1.07
VTA1-202ENST00000367630 CALRP27797 417 aaKnown RBP8.34□□□□□ -1.07
VTA1-202ENST00000367630 DNM1Q05193 864 aaKnown RBP8.34□□□□□ -1.07
VTA1-202ENST00000367630 DCAF8Q5TAQ9 597 aa8.34□□□□□ -1.07
VTA1-202ENST00000367630 UBE3BQ7Z3V4 1068 aa8.34□□□□□ -1.07
VTA1-202ENST00000367630 PDILTQ8N807 584 aa8.34□□□□□ -1.07
VTA1-202ENST00000367630 ALG1Q9BT22 464 aa8.34□□□□□ -1.07
VTA1-202ENST00000367630 KRT2P35908 639 aa8.34□□□□□ -1.07
VTA1-202ENST00000367630 PLCD1P51178 756 aa8.34□□□□□ -1.07
VTA1-202ENST00000367630 TEX2Q8IWB9 1127 aa8.34□□□□□ -1.07
VTA1-202ENST00000367630 SIRT2Q8IXJ6 389 aa8.34□□□□□ -1.07
VTA1-202ENST00000367630 FBXL16Q8N461 479 aa8.34□□□□□ -1.07
VTA1-202ENST00000367630 KLF18A0A0U1RQI7 1052 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 ERVV-1B6SEH8 477 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 PAXIP1Q6ZW49 1069 aaPredicted RBP8.33□□□□□ -1.08
VTA1-202ENST00000367630 IL17REQ8NFR9 667 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 MIS18AQ9NYP9 233 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 LRP2BPQ9P2M1 347 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 DDAH1O94760 285 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 SKILP12757 684 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 ZMYM1Q5SVZ6 1142 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 ANO1Q5XXA6 986 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 PI4K2BQ8TCG2 481 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 CALML4Q96GE6 196 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 PLA2G12BQ9BX93 195 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 SPTLC3Q9NUV7 552 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 ZNF330Q9Y3S2 320 aaPredicted RBP8.33□□□□□ -1.08
VTA1-202ENST00000367630 PHLPP2Q6ZVD8 1323 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 LMO7Q8WWI1 1683 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 SPC24Q8NBT2 197 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 LPIN2Q92539 896 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 TCP11L1Q9NUJ3 509 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 PNMA2Q9UL42 364 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 TRIM75PA6NK02 468 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 STK3Q13188 491 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 CCDC155Q8N6L0 562 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 VTI1AQ96AJ9 217 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 NWD1Q149M9 1564 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 G2E3Q7L622 706 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 RCOR1Q9UKL0 485 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 MAP4K4O95819 1239 aaPredicted RBP8.33□□□□□ -1.08
VTA1-202ENST00000367630 ERCC5P28715 1186 aaPredicted RBP8.33□□□□□ -1.08
VTA1-202ENST00000367630 C16orf71Q8IYS4 520 aaPredicted RBP8.33□□□□□ -1.08
VTA1-202ENST00000367630 CNPY4Q8N129 248 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 TTC14Q96N46 770 aa8.33□□□□□ -1.08
VTA1-202ENST00000367630 SPEF2Q9C093 1822 aa8.32□□□□□ -1.08
VTA1-202ENST00000367630 VWA3BQ502W6 1294 aa8.32□□□□□ -1.08
VTA1-202ENST00000367630 SPATS2Q86XZ4 545 aaKnown RBP8.32□□□□□ -1.08
VTA1-202ENST00000367630 UTP14AQ9BVJ6 771 aaKnown RBP8.32□□□□□ -1.08
VTA1-202ENST00000367630 PNMA6EA0A0J9YXQ4 647 aa8.32□□□□□ -1.08
VTA1-202ENST00000367630 TRIM37O94972 964 aa8.32□□□□□ -1.08
VTA1-202ENST00000367630 UBASH3AP57075 661 aa8.32□□□□□ -1.08
VTA1-202ENST00000367630 NECTIN1Q15223 517 aa8.32□□□□□ -1.08
VTA1-202ENST00000367630 ALX1Q15699 326 aa8.32□□□□□ -1.08
VTA1-202ENST00000367630 TPRNQ4KMQ1 711 aa8.32□□□□□ -1.08
VTA1-202ENST00000367630 GIMAP6Q6P9H5 292 aa8.32□□□□□ -1.08
VTA1-202ENST00000367630 DNAI2Q9GZS0 605 aa8.32□□□□□ -1.08
VTA1-202ENST00000367630 MAST3O60307 1309 aa8.32□□□□□ -1.08
VTA1-202ENST00000367630 EXOC5O00471 708 aa8.32□□□□□ -1.08
VTA1-202ENST00000367630 BRD3Q15059 726 aa8.32□□□□□ -1.08
VTA1-202ENST00000367630 IQUBQ8NA54 791 aa8.32□□□□□ -1.08
VTA1-202ENST00000367630 ZNF579Q8NAF0 562 aaKnown RBP8.32□□□□□ -1.08
VTA1-202ENST00000367630 LRRC37A3O60309 1634 aa8.32□□□□□ -1.08
VTA1-202ENST00000367630 XPCQ01831 940 aaPredicted RBP8.32□□□□□ -1.08
VTA1-202ENST00000367630 RBM26Q5T8P6 1007 aaKnown RBP8.32□□□□□ -1.08
VTA1-202ENST00000367630 LMBR1LQ6UX01 489 aa8.32□□□□□ -1.08
VTA1-202ENST00000367630 LDHAL6AQ6ZMR3 332 aa8.32□□□□□ -1.08
VTA1-202ENST00000367630 TMC4Q7Z404 712 aa8.32□□□□□ -1.08
VTA1-202ENST00000367630 TMTC1Q8IUR5 882 aa8.32□□□□□ -1.08
VTA1-202ENST00000367630 SUCLG2Q96I99 432 aa8.32□□□□□ -1.08
VTA1-202ENST00000367630 MED1Q15648 1581 aaPredicted RBP8.32□□□□□ -1.08
VTA1-202ENST00000367630 HEG1Q9ULI3 1381 aa8.32□□□□□ -1.08
VTA1-202ENST00000367630 TRIM28Q13263 835 aaKnown RBP8.31□□□□□ -1.08
VTA1-202ENST00000367630 TRMT112Q9UI30 125 aaKnown RBP8.31□□□□□ -1.08
VTA1-202ENST00000367630 MYO5BQ9ULV0 1848 aa8.31□□□□□ -1.08
VTA1-202ENST00000367630 CCDC194A0A1B0GVG4 234 aa8.31□□□□□ -1.08
VTA1-202ENST00000367630 PSMA7O14818 248 aa8.31□□□□□ -1.08
VTA1-202ENST00000367630 TFCP2Q12800 502 aa8.31□□□□□ -1.08
VTA1-202ENST00000367630 CCDC181Q5TID7 509 aa8.31□□□□□ -1.08
VTA1-202ENST00000367630 USPL1Q5W0Q7 1092 aa8.31□□□□□ -1.08
VTA1-202ENST00000367630 TMC6Q7Z403 805 aa8.31□□□□□ -1.08
VTA1-202ENST00000367630 LMBR1Q8WVP7 490 aa8.31□□□□□ -1.08
VTA1-202ENST00000367630 OPA1O60313 960 aa8.31□□□□□ -1.08
VTA1-202ENST00000367630 CARD10Q9BWT7 1032 aa8.31□□□□□ -1.08
VTA1-202ENST00000367630 FOXP1Q9H334 677 aaPredicted RBP8.31□□□□□ -1.08
VTA1-202ENST00000367630 TMEM63CQ9P1W3 806 aa8.31□□□□□ -1.08
VTA1-202ENST00000367630 CPDO75976 1380 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms