RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 ARHGEF25Q86VW2 580 aa9.44□□□□□ -0.9
CD46-208ENST00000367042 FBXO18Q8NFZ0 1043 aa9.44□□□□□ -0.9
CD46-208ENST00000367042 NCOA7Q8NI08 942 aa9.44□□□□□ -0.9
CD46-208ENST00000367042 CABLES1Q8TDN4 633 aa9.44□□□□□ -0.9
CD46-208ENST00000367042 ZNF274Q96GC6 653 aaPredicted RBP9.44□□□□□ -0.9
CD46-208ENST00000367042 LTN1O94822 1766 aa9.44□□□□□ -0.9
CD46-208ENST00000367042 A0A0G2JS52 829 aa9.44□□□□□ -0.9
CD46-208ENST00000367042 CBFA2T2O43439 604 aa9.44□□□□□ -0.9
CD46-208ENST00000367042 METAP2P50579 478 aaKnown RBP eCLIP9.44□□□□□ -0.9
CD46-208ENST00000367042 EVCP57679 992 aa9.44□□□□□ -0.9
CD46-208ENST00000367042 ETF1P62495 437 aaKnown RBP9.44□□□□□ -0.9
CD46-208ENST00000367042 LRRFIP1Q32MZ4 808 aaKnown RBP9.44□□□□□ -0.9
CD46-208ENST00000367042 DPF2Q92785 391 aa9.44□□□□□ -0.9
CD46-208ENST00000367042 TIGD1Q96MW7 591 aa9.44□□□□□ -0.9
CD46-208ENST00000367042 CWC25Q9NXE8 425 aaPredicted RBP9.44□□□□□ -0.9
CD46-208ENST00000367042 NFAT5O94916 1531 aa9.44□□□□□ -0.9
CD46-208ENST00000367042 KIF28PB7ZC32 967 aa9.44□□□□□ -0.9
CD46-208ENST00000367042 CCP110O43303 1012 aa9.44□□□□□ -0.9
CD46-208ENST00000367042 FGAP02671 866 aa9.44□□□□□ -0.9
CD46-208ENST00000367042 RFX5P48382 616 aaPredicted RBP9.44□□□□□ -0.9
CD46-208ENST00000367042 EXOSC10Q01780 885 aaKnown RBP9.44□□□□□ -0.9
CD46-208ENST00000367042 ZMYM1Q5SVZ6 1142 aa9.44□□□□□ -0.9
CD46-208ENST00000367042 KLHL10Q6JEL2 608 aa9.44□□□□□ -0.9
CD46-208ENST00000367042 TTLL7Q6ZT98 887 aa9.44□□□□□ -0.9
CD46-208ENST00000367042 JMYQ8N9B5 988 aa9.44□□□□□ -0.9
CD46-208ENST00000367042 TMEM232C9JQI7 657 aa9.43□□□□□ -0.9
CD46-208ENST00000367042 CASQ1P31415 396 aa9.43□□□□□ -0.9
CD46-208ENST00000367042 IL15P40933 162 aaPredicted RBP9.43□□□□□ -0.9
CD46-208ENST00000367042 ADKP55263 362 aaKnown RBP9.43□□□□□ -0.9
CD46-208ENST00000367042 MYL5Q02045 173 aa9.43□□□□□ -0.9
CD46-208ENST00000367042 IFNL2Q8IZJ0 200 aa9.43□□□□□ -0.9
CD46-208ENST00000367042 NEK11Q8NG66 645 aa9.43□□□□□ -0.9
CD46-208ENST00000367042 OSBPL5Q9H0X9 879 aaPredicted RBP9.43□□□□□ -0.9
CD46-208ENST00000367042 FANCLQ9NW38 375 aa9.43□□□□□ -0.9
CD46-208ENST00000367042 UTYO14607 1347 aa9.43□□□□□ -0.9
CD46-208ENST00000367042 SH3TC1Q8TE82 1336 aa9.43□□□□□ -0.9
CD46-208ENST00000367042 ZSCAN12O43309 604 aa9.43□□□□□ -0.9
CD46-208ENST00000367042 ADORA1P30542 326 aa9.43□□□□□ -0.9
CD46-208ENST00000367042 ZNF827Q17R98 1081 aa9.43□□□□□ -0.9
CD46-208ENST00000367042 KRT28Q7Z3Y7 464 aa9.43□□□□□ -0.9
CD46-208ENST00000367042 VPS37DQ86XT2 251 aa9.43□□□□□ -0.9
CD46-208ENST00000367042 TRMT44Q8IYL2 757 aaKnown RBP9.43□□□□□ -0.9
CD46-208ENST00000367042 DDX17Q92841 729 aaKnown RBP9.43□□□□□ -0.9
CD46-208ENST00000367042 DESI2Q9BSY9 194 aa9.43□□□□□ -0.9
CD46-208ENST00000367042 ZNF446Q9NWS9 450 aa9.43□□□□□ -0.9
CD46-208ENST00000367042 PHRF1Q9P1Y6 1649 aaKnown RBP9.43□□□□□ -0.9
CD46-208ENST00000367042 A0A1W2PQ27 194 aa9.43□□□□□ -0.9
CD46-208ENST00000367042 A0A1W2PQ64 194 aa9.43□□□□□ -0.9
CD46-208ENST00000367042 A0A1W2PQD8 194 aa9.43□□□□□ -0.9
CD46-208ENST00000367042 YEATS4O95619 227 aa9.43□□□□□ -0.9
CD46-208ENST00000367042 A1BGP04217 495 aa9.43□□□□□ -0.9
CD46-208ENST00000367042 PSDA5PKW4 1024 aaPredicted RBP9.42□□□□□ -0.9
CD46-208ENST00000367042 EYA2O00167 538 aa9.42□□□□□ -0.9
CD46-208ENST00000367042 WDHD1O75717 1129 aaPredicted RBP9.42□□□□□ -0.9
CD46-208ENST00000367042 PNMA6AP0CW24 399 aaPredicted RBP9.42□□□□□ -0.9
CD46-208ENST00000367042 ZAP70P43403 619 aa9.42□□□□□ -0.9
CD46-208ENST00000367042 CCDC102BQ68D86 513 aa9.42□□□□□ -0.9
CD46-208ENST00000367042 BRAPQ7Z569 592 aa9.42□□□□□ -0.9
CD46-208ENST00000367042 SLC26A6Q9BXS9 759 aa9.42□□□□□ -0.9
CD46-208ENST00000367042 ZCCHC17Q9NP64 241 aaKnown RBP9.42□□□□□ -0.9
CD46-208ENST00000367042 LZTFL1Q9NQ48 299 aa9.42□□□□□ -0.9
CD46-208ENST00000367042 CALCOCO1Q9P1Z2 691 aa9.42□□□□□ -0.9
CD46-208ENST00000367042 LRRC37A3O60309 1634 aa9.42□□□□□ -0.9
CD46-208ENST00000367042 CCDC12Q8WUD4 166 aaPredicted RBP9.42□□□□□ -0.9
CD46-208ENST00000367042 PUS7LQ9H0K6 701 aaKnown RBP9.42□□□□□ -0.9
CD46-208ENST00000367042 POLR3EQ9NVU0 708 aa9.42□□□□□ -0.9
CD46-208ENST00000367042 DENND2AQ9ULE3 1009 aa9.42□□□□□ -0.9
CD46-208ENST00000367042 STRCP1A6NGW2 1772 aa9.41□□□□□ -0.9
CD46-208ENST00000367042 B4E1Z4 1266 aa9.41□□□□□ -0.9
CD46-208ENST00000367042 GPAA1O43292 621 aa9.41□□□□□ -0.9
CD46-208ENST00000367042 PHKG2P15735 406 aa9.41□□□□□ -0.9
CD46-208ENST00000367042 KIF23Q02241 960 aaPredicted RBP9.41□□□□□ -0.9
CD46-208ENST00000367042 TRPM3Q9HCF6 1732 aaPredicted RBP9.41□□□□□ -0.9
CD46-208ENST00000367042 CMA1P23946 247 aa9.41□□□□□ -0.9
CD46-208ENST00000367042 IARSP41252 1262 aaKnown RBP9.41□□□□□ -0.9
CD46-208ENST00000367042 METTL24Q5JXM2 366 aa9.41□□□□□ -0.9
CD46-208ENST00000367042 KRT40Q6A162 431 aa9.41□□□□□ -0.9
CD46-208ENST00000367042 PLBD2Q8NHP8 589 aa9.41□□□□□ -0.9
CD46-208ENST00000367042 XAGE2Q96GT9 111 aa9.41□□□□□ -0.9
CD46-208ENST00000367042 BAG1Q99933 345 aaPredicted RBP9.41□□□□□ -0.9
CD46-208ENST00000367042 MROH7-TTC4A0A0A0MT08 1334 aa9.41□□□□□ -0.9
CD46-208ENST00000367042 GOLGA8AA7E2F4 631 aa9.41□□□□□ -0.9
CD46-208ENST00000367042 PES1O00541 588 aaKnown RBP9.41□□□□□ -0.9
CD46-208ENST00000367042 FOXN1O15353 648 aa9.41□□□□□ -0.9
CD46-208ENST00000367042 TNNT3P45378 269 aaPredicted RBP9.41□□□□□ -0.9
CD46-208ENST00000367042 GYS2P54840 703 aa9.41□□□□□ -0.9
CD46-208ENST00000367042 SAFBQ15424 915 aaKnown RBP eCLIP9.41□□□□□ -0.96e-6■□□□□ 10.7
CD46-208ENST00000367042 SKIDA1Q1XH10 827 aa9.41□□□□□ -0.9
CD46-208ENST00000367042 SLC9C2Q5TAH2 1124 aa9.41□□□□□ -0.9
CD46-208ENST00000367042 NUP133Q8WUM0 1156 aa9.41□□□□□ -0.9
CD46-208ENST00000367042 FAM89AQ96GI7 184 aa9.41□□□□□ -0.9
CD46-208ENST00000367042 PUF60Q9UHX1 559 aaKnown RBP9.41□□□□□ -0.9
CD46-208ENST00000367042 PCDHA5Q9Y5H7 936 aa9.41□□□□□ -0.9
CD46-208ENST00000367042 STX17P56962 302 aa9.4□□□□□ -0.9
CD46-208ENST00000367042 GPS2Q13227 327 aa9.4□□□□□ -0.9
CD46-208ENST00000367042 MCM6Q14566 821 aa9.4□□□□□ -0.9
CD46-208ENST00000367042 ATG9AQ7Z3C6 839 aa9.4□□□□□ -0.9
CD46-208ENST00000367042 CMTR1Q8N1G2 835 aaKnown RBP9.4□□□□□ -0.9
CD46-208ENST00000367042 CNNM1Q9NRU3 951 aa9.4□□□□□ -0.9
CD46-208ENST00000367042 HOOK1Q9UJC3 728 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms