RNA–Protein interactions for RNA: ENST00000366888.6

PACRG-202, Transcript of parkin coregulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACRG, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-202ENST00000366888 CCDC57Q2TAC2 916 aa10.15□□□□□ -0.78
PACRG-202ENST00000366888 SPDYE2Q495Y8 402 aa10.15□□□□□ -0.78
PACRG-202ENST00000366888 INTS3Q68E01 1043 aaKnown RBP10.15□□□□□ -0.78
PACRG-202ENST00000366888 OTUD7BQ6GQQ9 843 aa10.15□□□□□ -0.78
PACRG-202ENST00000366888 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.15□□□□□ -0.78
PACRG-202ENST00000366888 ARMC5Q96C12 935 aa10.15□□□□□ -0.78
PACRG-202ENST00000366888 TEPSINQ96N21 525 aa10.15□□□□□ -0.78
PACRG-202ENST00000366888 PUS3Q9BZE2 481 aaKnown RBP10.15□□□□□ -0.78
PACRG-202ENST00000366888 TMEM39BQ9GZU3 492 aa10.15□□□□□ -0.78
PACRG-202ENST00000366888 IQSEC3Q9UPP2 1182 aaPredicted RBP10.15□□□□□ -0.78
PACRG-202ENST00000366888 MGAMO43451 1857 aa10.15□□□□□ -0.79
PACRG-202ENST00000366888 IL16Q14005 1332 aa10.15□□□□□ -0.79
PACRG-202ENST00000366888 CCL15-CCL14A0A0B4J2E2 113 aa10.14□□□□□ -0.79
PACRG-202ENST00000366888 TESPA1A2RU30 521 aaPredicted RBP10.14□□□□□ -0.79
PACRG-202ENST00000366888 GRM8O00222 908 aa10.14□□□□□ -0.79
PACRG-202ENST00000366888 CACNB3P54284 484 aa10.14□□□□□ -0.79
PACRG-202ENST00000366888 VGLL4Q14135 290 aa10.14□□□□□ -0.79
PACRG-202ENST00000366888 TAF1CQ15572 869 aaPredicted RBP10.14□□□□□ -0.79
PACRG-202ENST00000366888 CCL15Q16663 113 aa10.14□□□□□ -0.79
PACRG-202ENST00000366888 DZIP1LQ8IYY4 767 aaKnown RBP10.14□□□□□ -0.79
PACRG-202ENST00000366888 FAM43AQ8N2R8 423 aa10.14□□□□□ -0.79
PACRG-202ENST00000366888 TDRD7Q8NHU6 1098 aaKnown RBP10.14□□□□□ -0.79
PACRG-202ENST00000366888 BRI3BPQ8WY22 251 aa10.14□□□□□ -0.79
PACRG-202ENST00000366888 OTUD5Q96G74 571 aa10.14□□□□□ -0.79
PACRG-202ENST00000366888 MS4A4AQ96JQ5 239 aa10.14□□□□□ -0.79
PACRG-202ENST00000366888 PTCH2Q9Y6C5 1203 aa10.14□□□□□ -0.79
PACRG-202ENST00000366888 UNCXA6NJT0 531 aa10.14□□□□□ -0.79
PACRG-202ENST00000366888 HIBADHP31937 336 aaKnown RBP10.14□□□□□ -0.79
PACRG-202ENST00000366888 CRKP46108 304 aa10.14□□□□□ -0.79
PACRG-202ENST00000366888 CHAF1AQ13111 956 aaPredicted RBP10.14□□□□□ -0.79
PACRG-202ENST00000366888 TNFAIP1Q13829 316 aa10.14□□□□□ -0.79
PACRG-202ENST00000366888 FAM84BQ96KN1 310 aaPredicted RBP10.14□□□□□ -0.79
PACRG-202ENST00000366888 RNF39Q9H2S5 420 aa10.14□□□□□ -0.79
PACRG-202ENST00000366888 C9orf78Q9NZ63 289 aaPredicted RBP10.14□□□□□ -0.79
PACRG-202ENST00000366888 SERPINA10Q9UK55 444 aa10.14□□□□□ -0.79
PACRG-202ENST00000366888 MAP3K9P80192 1104 aa10.13□□□□□ -0.79
PACRG-202ENST00000366888 SLC9C1Q4G0N8 1177 aa10.13□□□□□ -0.79
PACRG-202ENST00000366888 SLC4A10Q6U841 1118 aa10.13□□□□□ -0.79
PACRG-202ENST00000366888 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.13□□□□□ -0.79
PACRG-202ENST00000366888 SUCLG2Q96I99 432 aa10.13□□□□□ -0.79
PACRG-202ENST00000366888 ZNF333Q96JL9 665 aa10.13□□□□□ -0.79
PACRG-202ENST00000366888 ARHGAP39Q9C0H5 1083 aa10.13□□□□□ -0.79
PACRG-202ENST00000366888 SPINK5Q9NQ38 1064 aaPredicted RBP10.13□□□□□ -0.79
PACRG-202ENST00000366888 CEP290O15078 2479 aa10.12□□□□□ -0.79
PACRG-202ENST00000366888 FXR1P51114 621 aaKnown RBP eCLIP10.12□□□□□ -0.79
PACRG-202ENST00000366888 GTF2A2P52657 109 aa10.12□□□□□ -0.79
PACRG-202ENST00000366888 UBE4AQ14139 1066 aa10.12□□□□□ -0.79
PACRG-202ENST00000366888 SLC4A8Q2Y0W8 1093 aa10.12□□□□□ -0.79
PACRG-202ENST00000366888 SH3TC2Q8TF17 1288 aa10.12□□□□□ -0.79
PACRG-202ENST00000366888 KAZALD1Q96I82 304 aa10.12□□□□□ -0.79
PACRG-202ENST00000366888 TMEM106CQ9BVX2 250 aa10.12□□□□□ -0.79
PACRG-202ENST00000366888 ZFYVE28Q9HCC9 887 aa10.12□□□□□ -0.79
PACRG-202ENST00000366888 CSADQ9Y600 493 aa10.12□□□□□ -0.79
PACRG-202ENST00000366888 SNCAIPQ9Y6H5 919 aa10.12□□□□□ -0.79
PACRG-202ENST00000366888 DOCK2Q92608 1830 aa10.11□□□□□ -0.79
PACRG-202ENST00000366888 TNNI2P48788 182 aa10.11□□□□□ -0.79
PACRG-202ENST00000366888 LRRC24Q50LG9 513 aa10.11□□□□□ -0.79
PACRG-202ENST00000366888 ZKSCAN4Q969J2 545 aaPredicted RBP10.11□□□□□ -0.79
PACRG-202ENST00000366888 COLQQ9Y215 455 aaPredicted RBP10.11□□□□□ -0.79
PACRG-202ENST00000366888 SPDYE5A6NIY4 337 aa10.1□□□□□ -0.79
PACRG-202ENST00000366888 BTBD19C9JJ37 291 aa10.1□□□□□ -0.79
PACRG-202ENST00000366888 FRAT2O75474 233 aaPredicted RBP10.1□□□□□ -0.79
PACRG-202ENST00000366888 NBPF7P0C2Y1 421 aaPredicted RBP10.1□□□□□ -0.79
PACRG-202ENST00000366888 VPS37DQ86XT2 251 aa10.1□□□□□ -0.79
PACRG-202ENST00000366888 WRNIP1Q96S55 665 aa10.1□□□□□ -0.79
PACRG-202ENST00000366888 SRCIN1Q9C0H9 1055 aa10.1□□□□□ -0.79
PACRG-202ENST00000366888 BICC1Q9H694 974 aaKnown RBP10.1□□□□□ -0.79
PACRG-202ENST00000366888 MRS2Q9HD23 443 aa10.1□□□□□ -0.79
PACRG-202ENST00000366888 RIPOR2Q9Y4F9 1068 aa10.1□□□□□ -0.79
PACRG-202ENST00000366888 PTPRFP10586 1907 aa10.1□□□□□ -0.79
PACRG-202ENST00000366888 MROH5Q6ZUA9 1318 aa10.09□□□□□ -0.79
PACRG-202ENST00000366888 MYH2Q9UKX2 1941 aa10.09□□□□□ -0.79
PACRG-202ENST00000366888 TRIOBPQ9H2D6 2365 aa10.09□□□□□ -0.79
PACRG-202ENST00000366888 IRF6O14896 467 aa10.09□□□□□ -0.79
PACRG-202ENST00000366888 ALDH1L1O75891 902 aa10.09□□□□□ -0.79
PACRG-202ENST00000366888 METTL24Q5JXM2 366 aa10.09□□□□□ -0.79
PACRG-202ENST00000366888 FBXO33Q7Z6M2 555 aa10.09□□□□□ -0.79
PACRG-202ENST00000366888 NBPF11Q86T75 865 aa10.09□□□□□ -0.79
PACRG-202ENST00000366888 WDR63Q8IWG1 891 aa10.09□□□□□ -0.79
PACRG-202ENST00000366888 KLHDC4Q8TBB5 520 aa10.09□□□□□ -0.79
PACRG-202ENST00000366888 TEKT1Q969V4 418 aa10.09□□□□□ -0.79
PACRG-202ENST00000366888 H0YGN5 161 aa10.08□□□□□ -0.8
PACRG-202ENST00000366888 TLR2O60603 784 aa10.08□□□□□ -0.8
PACRG-202ENST00000366888 CETPP11597 493 aa10.08□□□□□ -0.8
PACRG-202ENST00000366888 CTGFP29279 349 aa10.08□□□□□ -0.8
PACRG-202ENST00000366888 INPP5BP32019 993 aa10.08□□□□□ -0.8
PACRG-202ENST00000366888 BCAMP50895 628 aa10.08□□□□□ -0.8
PACRG-202ENST00000366888 LACTBP83111 547 aaPredicted RBP10.08□□□□□ -0.8
PACRG-202ENST00000366888 ARHGEF6Q15052 776 aa10.08□□□□□ -0.8
PACRG-202ENST00000366888 MTFR1Q15390 333 aa10.08□□□□□ -0.8
PACRG-202ENST00000366888 MIGA2Q7L4E1 593 aa10.08□□□□□ -0.8
PACRG-202ENST00000366888 ERO1BQ86YB8 467 aa10.08□□□□□ -0.8
PACRG-202ENST00000366888 VGLL2Q8N8G2 317 aa10.08□□□□□ -0.8
PACRG-202ENST00000366888 CPA4Q9UI42 421 aa10.08□□□□□ -0.8
PACRG-202ENST00000366888 HDLBPQ00341 1268 aaKnown RBP10.07□□□□□ -0.8
PACRG-202ENST00000366888 SNAPC2Q13487 334 aa10.07□□□□□ -0.8
PACRG-202ENST00000366888 KIF22Q14807 665 aa10.07□□□□□ -0.8
PACRG-202ENST00000366888 CAVIN4Q5BKX8 364 aa10.07□□□□□ -0.8
PACRG-202ENST00000366888 APOBEC3HQ6NTF7 200 aaKnown RBP10.07□□□□□ -0.8
PACRG-202ENST00000366888 ANKRD44Q8N8A2 993 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms