RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 SMC3Q9UQE7 1217 aa12.94□□□□□ -0.34
H3F3A-202ENST00000366814 UQCRFS1P1P0C7P4 283 aa12.93□□□□□ -0.34
H3F3A-202ENST00000366814 PDIA4P13667 645 aaKnown RBP12.93□□□□□ -0.34
H3F3A-202ENST00000366814 ADORA1P30542 326 aa12.93□□□□□ -0.34
H3F3A-202ENST00000366814 IGHMBP2P38935 993 aaKnown RBP12.93□□□□□ -0.34
H3F3A-202ENST00000366814 PUM3Q15397 648 aaKnown RBP12.93□□□□□ -0.34
H3F3A-202ENST00000366814 MCTP1Q6DN14 999 aa12.93□□□□□ -0.34
H3F3A-202ENST00000366814 RTL9Q8NET4 1388 aa12.93□□□□□ -0.34
H3F3A-202ENST00000366814 DICER1Q9UPY3 1922 aaKnown RBP12.93□□□□□ -0.34
H3F3A-202ENST00000366814 LTBP3Q9NS15 1303 aa12.93□□□□□ -0.34
H3F3A-202ENST00000366814 BRD1O95696 1058 aa12.93□□□□□ -0.34
H3F3A-202ENST00000366814 HMGB1P09429 215 aaKnown RBP12.93□□□□□ -0.34
H3F3A-202ENST00000366814 SLC5A1P13866 664 aa12.93□□□□□ -0.34
H3F3A-202ENST00000366814 RPS6KB1P23443 525 aa12.93□□□□□ -0.34
H3F3A-202ENST00000366814 CCDC129Q6ZRS4 1044 aa12.93□□□□□ -0.34
H3F3A-202ENST00000366814 LPIN2Q92539 896 aa12.93□□□□□ -0.34
H3F3A-202ENST00000366814 TMX4Q9H1E5 349 aaPredicted RBP12.93□□□□□ -0.34
H3F3A-202ENST00000366814 NMRK2Q9NPI5 230 aa12.93□□□□□ -0.34
H3F3A-202ENST00000366814 ZC3H4Q9UPT8 1303 aaKnown RBP12.92□□□□□ -0.34
H3F3A-202ENST00000366814 DDX60Q8IY21 1712 aaKnown RBP12.92□□□□□ -0.34
H3F3A-202ENST00000366814 CPA1P15085 419 aa12.92□□□□□ -0.34
H3F3A-202ENST00000366814 PKP1Q13835 747 aa12.92□□□□□ -0.34
H3F3A-202ENST00000366814 DPY19L2Q6NUT2 758 aa12.92□□□□□ -0.34
H3F3A-202ENST00000366814 NEK1Q96PY6 1258 aa12.92□□□□□ -0.34
H3F3A-202ENST00000366814 SEC62Q99442 399 aaKnown RBP12.92□□□□□ -0.34
H3F3A-202ENST00000366814 ISY1Q9ULR0 285 aaKnown RBP12.92□□□□□ -0.34
H3F3A-202ENST00000366814 MYH7P12883 1935 aa12.92□□□□□ -0.34
H3F3A-202ENST00000366814 ARAP2Q8WZ64 1704 aa12.92□□□□□ -0.34
H3F3A-202ENST00000366814 KIF3CO14782 793 aa12.91□□□□□ -0.34
H3F3A-202ENST00000366814 PPEF1O14829 653 aaPredicted RBP12.91□□□□□ -0.34
H3F3A-202ENST00000366814 WASHC4Q2M389 1173 aa12.91□□□□□ -0.34
H3F3A-202ENST00000366814 CC2D2BQ6DHV5 1058 aa12.91□□□□□ -0.34
H3F3A-202ENST00000366814 VGLL2Q8N8G2 317 aa12.91□□□□□ -0.34
H3F3A-202ENST00000366814 CDC5LQ99459 802 aaKnown RBP12.91□□□□□ -0.34
H3F3A-202ENST00000366814 GZF1Q9H116 711 aaPredicted RBP12.91□□□□□ -0.34
H3F3A-202ENST00000366814 RRAGCQ9HB90 399 aa12.91□□□□□ -0.34
H3F3A-202ENST00000366814 CTNNA3Q9UI47 895 aa12.91□□□□□ -0.34
H3F3A-202ENST00000366814 DDX49Q9Y6V7 483 aaKnown RBP12.91□□□□□ -0.34
H3F3A-202ENST00000366814 KLHL40Q2TBA0 621 aa12.91□□□□□ -0.34
H3F3A-202ENST00000366814 ZNF277Q9NRM2 450 aaPredicted RBP12.91□□□□□ -0.34
H3F3A-202ENST00000366814 ZDHHC9Q9Y397 364 aa12.91□□□□□ -0.34
H3F3A-202ENST00000366814 ATP6V1DQ9Y5K8 247 aa12.91□□□□□ -0.34
H3F3A-202ENST00000366814 MAST3O60307 1309 aa12.9□□□□□ -0.34
H3F3A-202ENST00000366814 GOLGA6L3A6NEY3 463 aa12.9□□□□□ -0.34
H3F3A-202ENST00000366814 GLTPD2A6NH11 291 aa12.9□□□□□ -0.34
H3F3A-202ENST00000366814 ZAP70P43403 619 aa12.9□□□□□ -0.34
H3F3A-202ENST00000366814 CCDC83Q8IWF9 413 aa12.9□□□□□ -0.34
H3F3A-202ENST00000366814 APPBP2Q92624 585 aa12.9□□□□□ -0.34
H3F3A-202ENST00000366814 TIAM2Q8IVF5 1701 aa12.9□□□□□ -0.34
H3F3A-202ENST00000366814 BBOX1O75936 387 aa12.89□□□□□ -0.35
H3F3A-202ENST00000366814 HSPD1P10809 573 aaKnown RBP12.89□□□□□ -0.35
H3F3A-202ENST00000366814 ARID4AP29374 1257 aaPredicted RBP12.89□□□□□ -0.35
H3F3A-202ENST00000366814 FGD1P98174 961 aa12.89□□□□□ -0.35
H3F3A-202ENST00000366814 GRIPAP1Q4V328 841 aa12.89□□□□□ -0.35
H3F3A-202ENST00000366814 PAXIP1Q6ZW49 1069 aaPredicted RBP12.89□□□□□ -0.35
H3F3A-202ENST00000366814 TAF1P21675 1872 aa12.89□□□□□ -0.35
H3F3A-202ENST00000366814 CYP21A2P08686 494 aa12.89□□□□□ -0.35
H3F3A-202ENST00000366814 MCAMP43121 646 aa12.89□□□□□ -0.35
H3F3A-202ENST00000366814 CCDC102BQ68D86 513 aa12.89□□□□□ -0.35
H3F3A-202ENST00000366814 STX6O43752 255 aa12.88□□□□□ -0.35
H3F3A-202ENST00000366814 TOMM70O94826 608 aa12.88□□□□□ -0.35
H3F3A-202ENST00000366814 PDCP20941 246 aa12.88□□□□□ -0.35
H3F3A-202ENST00000366814 FGFR2P21802 821 aa12.88□□□□□ -0.35
H3F3A-202ENST00000366814 IARSP41252 1262 aaKnown RBP12.88□□□□□ -0.35
H3F3A-202ENST00000366814 SCARF1Q14162 830 aa12.88□□□□□ -0.35
H3F3A-202ENST00000366814 ME3Q16798 604 aa12.88□□□□□ -0.35
H3F3A-202ENST00000366814 FOXD4L5Q5VV16 416 aaPredicted RBP12.88□□□□□ -0.35
H3F3A-202ENST00000366814 FOXD4L4Q8WXT5 416 aaPredicted RBP12.88□□□□□ -0.35
H3F3A-202ENST00000366814 CHMP4CQ96CF2 233 aa12.88□□□□□ -0.35
H3F3A-202ENST00000366814 PSMD1Q99460 953 aa12.88□□□□□ -0.35
H3F3A-202ENST00000366814 LARP6Q9BRS8 491 aaKnown RBP12.88□□□□□ -0.35
H3F3A-202ENST00000366814 ATP6V0A2Q9Y487 856 aa12.88□□□□□ -0.35
H3F3A-202ENST00000366814 M0R2C6 588 aa12.87□□□□□ -0.35
H3F3A-202ENST00000366814 MBD3O95983 291 aa12.87□□□□□ -0.35
H3F3A-202ENST00000366814 CHGBP05060 677 aa12.87□□□□□ -0.35
H3F3A-202ENST00000366814 NCLP19338 710 aaKnown RBP12.87□□□□□ -0.35
H3F3A-202ENST00000366814 GJB2P29033 226 aa12.87□□□□□ -0.35
H3F3A-202ENST00000366814 GRAPQ13588 217 aa12.87□□□□□ -0.35
H3F3A-202ENST00000366814 SF3B3Q15393 1217 aaKnown RBP12.87□□□□□ -0.35
H3F3A-202ENST00000366814 IMMTQ16891 758 aaKnown RBP12.87□□□□□ -0.35
H3F3A-202ENST00000366814 DCAF8Q5TAQ9 597 aa12.87□□□□□ -0.35
H3F3A-202ENST00000366814 GRAPLQ8TC17 118 aaPredicted RBP12.87□□□□□ -0.35
H3F3A-202ENST00000366814 SEC31BQ9NQW1 1179 aa12.87□□□□□ -0.35
H3F3A-202ENST00000366814 LMBRD1Q9NUN5 540 aa12.87□□□□□ -0.35
H3F3A-202ENST00000366814 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.87□□□□□ -0.35
H3F3A-202ENST00000366814 TPCN1Q9ULQ1 816 aa12.87□□□□□ -0.35
H3F3A-202ENST00000366814 AKAP11Q9UKA4 1901 aa12.87□□□□□ -0.35
H3F3A-202ENST00000366814 PRPF40AO75400 957 aaKnown RBP12.87□□□□□ -0.35
H3F3A-202ENST00000366814 LARGE1O95461 756 aa12.87□□□□□ -0.35
H3F3A-202ENST00000366814 ZSCAN22P10073 491 aaPredicted RBP12.87□□□□□ -0.35
H3F3A-202ENST00000366814 VEGFAP15692 232 aaPredicted RBP12.87□□□□□ -0.35
H3F3A-202ENST00000366814 DHX32Q7L7V1 743 aaKnown RBP12.87□□□□□ -0.35
H3F3A-202ENST00000366814 ANKRD18AQ8IVF6 992 aa12.87□□□□□ -0.35
H3F3A-202ENST00000366814 SP8Q8IXZ3 490 aa12.87□□□□□ -0.35
H3F3A-202ENST00000366814 JDP2Q8WYK2 163 aa12.87□□□□□ -0.35
H3F3A-202ENST00000366814 OSBP2Q969R2 916 aa12.87□□□□□ -0.35
H3F3A-202ENST00000366814 DDNO94850 711 aaPredicted RBP12.86□□□□□ -0.35
H3F3A-202ENST00000366814 SYT1P21579 422 aa12.86□□□□□ -0.35
H3F3A-202ENST00000366814 ADD2P35612 726 aa12.86□□□□□ -0.35
H3F3A-202ENST00000366814 PHKA1P46020 1223 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms