RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, human

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-216	ENST00000366744	ZBTB7B	O15156	539 aa	Predicted RBP	11.48	□□□□□ -0.57
MRPL55-216	ENST00000366744	SURF6	O75683	361 aa	Known RBP	11.48	□□□□□ -0.57
MRPL55-216	ENST00000366744	CRK	P46108	304 aa		11.48	□□□□□ -0.57
MRPL55-216	ENST00000366744	ATP8B2	P98198	1209 aa		11.48	□□□□□ -0.57
MRPL55-216	ENST00000366744	MAP2K1	Q02750	393 aa	Predicted RBP	11.48	□□□□□ -0.57
MRPL55-216	ENST00000366744	HSP90AB4P	Q58FF6	505 aa		11.48	□□□□□ -0.57
MRPL55-216	ENST00000366744	SSH3	Q8TE77	659 aa		11.48	□□□□□ -0.57
MRPL55-216	ENST00000366744	COG6	Q9Y2V7	657 aa		11.48	□□□□□ -0.57
MRPL55-216	ENST00000366744	LAMB1	P07942	1786 aa		11.47	□□□□□ -0.57
MRPL55-216	ENST00000366744	PDS5A	Q29RF7	1337 aa	Known RBP	11.47	□□□□□ -0.57
MRPL55-216	ENST00000366744	CLRN2	A0PK11	232 aa		11.47	□□□□□ -0.57
MRPL55-216	ENST00000366744	LDHB	P07195	334 aa	Known RBP	11.47	□□□□□ -0.57
MRPL55-216	ENST00000366744	HSPA1A	P0DMV8	641 aa	Known RBP	11.47	□□□□□ -0.57
MRPL55-216	ENST00000366744	HSPA1B	P0DMV9	641 aa	Known RBP	11.47	□□□□□ -0.57
MRPL55-216	ENST00000366744	PHKA1	P46020	1223 aa		11.47	□□□□□ -0.57
MRPL55-216	ENST00000366744	HDLBP	Q00341	1268 aa	Known RBP	11.47	□□□□□ -0.57
MRPL55-216	ENST00000366744	POLA2	Q14181	598 aa		11.47	□□□□□ -0.57
MRPL55-216	ENST00000366744	PDE3A	Q14432	1141 aa		11.47	□□□□□ -0.57
MRPL55-216	ENST00000366744	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.47	□□□□□ -0.57
MRPL55-216	ENST00000366744	CCDC102B	Q68D86	513 aa		11.47	□□□□□ -0.57
MRPL55-216	ENST00000366744	CYP4F22	Q6NT55	531 aa		11.47	□□□□□ -0.57
MRPL55-216	ENST00000366744	ARMC9	Q7Z3E5	817 aa		11.47	□□□□□ -0.57
MRPL55-216	ENST00000366744	DZIP1	Q86YF9	867 aa	Known RBP	11.47	□□□□□ -0.57
MRPL55-216	ENST00000366744	SLF2	Q8IX21	1173 aa		11.47	□□□□□ -0.57
MRPL55-216	ENST00000366744	MYH7	P12883	1935 aa		11.47	□□□□□ -0.57
MRPL55-216	ENST00000366744	MYO5A	Q9Y4I1	1855 aa	Known RBP	11.46	□□□□□ -0.57
MRPL55-216	ENST00000366744	SALL1	Q9NSC2	1324 aa		11.46	□□□□□ -0.57
MRPL55-216	ENST00000366744	UQCRFS1P1	P0C7P4	283 aa		11.46	□□□□□ -0.57
MRPL55-216	ENST00000366744	ADORA1	P30542	326 aa		11.46	□□□□□ -0.57
MRPL55-216	ENST00000366744	ZNF157	P51786	506 aa	Predicted RBP	11.46	□□□□□ -0.57
MRPL55-216	ENST00000366744	NOG	Q13253	232 aa		11.46	□□□□□ -0.57
MRPL55-216	ENST00000366744	SUPT20HL1	Q3ZLR7	823 aa		11.46	□□□□□ -0.57
MRPL55-216	ENST00000366744	CCDC158	Q5M9N0	1113 aa		11.46	□□□□□ -0.57
MRPL55-216	ENST00000366744	RGMB	Q6NW40	437 aa		11.46	□□□□□ -0.57
MRPL55-216	ENST00000366744	CEP85	Q6P2H3	762 aa		11.46	□□□□□ -0.57
MRPL55-216	ENST00000366744	CCDC102A	Q96A19	550 aa		11.46	□□□□□ -0.57
MRPL55-216	ENST00000366744	XAGE2	Q96GT9	111 aa		11.46	□□□□□ -0.57
MRPL55-216	ENST00000366744	ZBED3	Q96IU2	234 aa	Predicted RBP	11.46	□□□□□ -0.57
MRPL55-216	ENST00000366744	DEFB129	Q9H1M3	183 aa		11.46	□□□□□ -0.57
MRPL55-216	ENST00000366744	PPP1R12B	O60237	982 aa	Predicted RBP	11.45	□□□□□ -0.58
MRPL55-216	ENST00000366744	TIMM10	P62072	90 aa		11.45	□□□□□ -0.58
MRPL55-216	ENST00000366744	RASGRF1	Q13972	1273 aa		11.45	□□□□□ -0.58
MRPL55-216	ENST00000366744	SPDYE2	Q495Y8	402 aa		11.45	□□□□□ -0.58
MRPL55-216	ENST00000366744	TNNI3K	Q59H18	835 aa		11.45	□□□□□ -0.58
MRPL55-216	ENST00000366744	TTC39A	Q5SRH9	613 aa		11.45	□□□□□ -0.58
MRPL55-216	ENST00000366744	HOOK2	Q96ED9	719 aa		11.45	□□□□□ -0.58
MRPL55-216	ENST00000366744	GPR108	Q9NPR9	543 aa		11.45	□□□□□ -0.58
MRPL55-216	ENST00000366744	ABCF2	Q9UG63	623 aa		11.45	□□□□□ -0.58
MRPL55-216	ENST00000366744	SCAF8	Q9UPN6	1271 aa	Known RBP	11.45	□□□□□ -0.58
MRPL55-216	ENST00000366744	FPGT-TNNI3K	V9GXZ4	949 aa		11.45	□□□□□ -0.58
MRPL55-216	ENST00000366744	CDK5RAP2	Q96SN8	1893 aa		11.44	□□□□□ -0.58
MRPL55-216	ENST00000366744	FOCAD	Q5VW36	1801 aa		11.44	□□□□□ -0.58
MRPL55-216	ENST00000366744	MAP2K2	P36507	400 aa		11.44	□□□□□ -0.58
MRPL55-216	ENST00000366744	HHIPL2	Q6UWX4	724 aa		11.44	□□□□□ -0.58
MRPL55-216	ENST00000366744	DLK2	Q6UY11	383 aa		11.44	□□□□□ -0.58
MRPL55-216	ENST00000366744	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.44	□□□□□ -0.58
MRPL55-216	ENST00000366744	PRMT6	Q96LA8	375 aa	Predicted RBP	11.44	□□□□□ -0.58
MRPL55-216	ENST00000366744	ZDHHC15	Q96MV8	337 aa		11.44	□□□□□ -0.58
MRPL55-216	ENST00000366744	TDRD3	Q9H7E2	651 aa	Known RBP	11.44	□□□□□ -0.58
MRPL55-216	ENST00000366744	ZNF70	Q9UC06	446 aa	Predicted RBP	11.44	□□□□□ -0.58
MRPL55-216	ENST00000366744	CA12	O43570	354 aa		11.43	□□□□□ -0.58
MRPL55-216	ENST00000366744	PRDX5	P30044	214 aa		11.43	□□□□□ -0.58
MRPL55-216	ENST00000366744	GSTO1	P78417	241 aa		11.43	□□□□□ -0.58
MRPL55-216	ENST00000366744	PRKG1	Q13976	671 aa		11.43	□□□□□ -0.58
MRPL55-216	ENST00000366744	RASA3	Q14644	834 aa		11.43	□□□□□ -0.58
MRPL55-216	ENST00000366744	PRAMEF18	Q5VWM3	479 aa		11.43	□□□□□ -0.58
MRPL55-216	ENST00000366744	ERICH6	Q7L0X2	663 aa		11.43	□□□□□ -0.58
MRPL55-216	ENST00000366744	SPATA5	Q8NB90	893 aa		11.43	□□□□□ -0.58
MRPL55-216	ENST00000366744	NOL10	Q9BSC4	688 aa	Known RBP	11.43	□□□□□ -0.58
MRPL55-216	ENST00000366744	EXOC6B	Q9Y2D4	811 aa		11.43	□□□□□ -0.58
MRPL55-216	ENST00000366744	NOP58	Q9Y2X3	529 aa	Known RBP	11.43	□□□□□ -0.58
MRPL55-216	ENST00000366744	PCDHAC2	Q9Y5I4	1007 aa		11.43	□□□□□ -0.58
MRPL55-216	ENST00000366744	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.42	□□□□□ -0.58
MRPL55-216	ENST00000366744	TCP10L2	B9ZVM9	353 aa		11.42	□□□□□ -0.58
MRPL55-216	ENST00000366744	ZBTB22	O15209	634 aa		11.42	□□□□□ -0.58
MRPL55-216	ENST00000366744	SLC10A3	P09131	477 aa		11.42	□□□□□ -0.58
MRPL55-216	ENST00000366744	ARID4A	P29374	1257 aa	Predicted RBP	11.42	□□□□□ -0.58
MRPL55-216	ENST00000366744	IREB2	P48200	963 aa	Known RBP	11.42	□□□□□ -0.58
MRPL55-216	ENST00000366744	CTCF	P49711	727 aa	Predicted RBP	11.42	□□□□□ -0.58
MRPL55-216	ENST00000366744	REM2	Q8IYK8	340 aa	Predicted RBP	11.42	□□□□□ -0.58
MRPL55-216	ENST00000366744	MRI	Q9BWK5	157 aa		11.42	□□□□□ -0.58
MRPL55-216	ENST00000366744	ZBTB40	Q9NUA8	1239 aa		11.42	□□□□□ -0.58
MRPL55-216	ENST00000366744	ANGEL1	Q9UNK9	670 aa	Known RBP	11.42	□□□□□ -0.58
MRPL55-216	ENST00000366744	SSC5D	A1L4H1	1573 aa		11.41	□□□□□ -0.58
MRPL55-216	ENST00000366744	DOCK1	Q14185	1865 aa		11.41	□□□□□ -0.58
MRPL55-216	ENST00000366744	APBB1	O00213	710 aa		11.41	□□□□□ -0.58
MRPL55-216	ENST00000366744	AOC2	O75106	756 aa		11.41	□□□□□ -0.58
MRPL55-216	ENST00000366744	RRP1	P56182	461 aa	Known RBP	11.41	□□□□□ -0.58
MRPL55-216	ENST00000366744	DIXDC1	Q155Q3	683 aa		11.41	□□□□□ -0.58
MRPL55-216	ENST00000366744	GRIK5	Q16478	980 aa		11.41	□□□□□ -0.58
MRPL55-216	ENST00000366744	FKBP1C	Q5VVH2	108 aa		11.41	□□□□□ -0.58
MRPL55-216	ENST00000366744	AACS	Q86V21	672 aa		11.41	□□□□□ -0.58
MRPL55-216	ENST00000366744	CLASRP	Q8N2M8	674 aa	Known RBP	11.41	□□□□□ -0.58
MRPL55-216	ENST00000366744	KIF1BP	Q96EK5	621 aa		11.41	□□□□□ -0.58
MRPL55-216	ENST00000366744	RAI14	Q9P0K7	980 aa		11.41	□□□□□ -0.58
MRPL55-216	ENST00000366744	LRP2BP	Q9P2M1	347 aa		11.41	□□□□□ -0.58
MRPL55-216	ENST00000366744	DAGLA	Q9Y4D2	1042 aa		11.41	□□□□□ -0.58
MRPL55-216	ENST00000366744	ATAD5	Q96QE3	1844 aa		11.41	□□□□□ -0.58
MRPL55-216	ENST00000366744	MYH8	P13535	1937 aa		11.41	□□□□□ -0.58
MRPL55-216	ENST00000366744	NAV1	Q8NEY1	1877 aa		11.4	□□□□□ -0.58

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